RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 SLC39A7Q92504 469 aa12.9□□□□□ -0.34
HNRNPC-228ENST00000557033 TSKSQ9UJT2 592 aa12.9□□□□□ -0.34
HNRNPC-228ENST00000557033 DLG5Q8TDM6 1919 aa12.9□□□□□ -0.35
HNRNPC-228ENST00000557033 HAX1O00165 279 aa12.89□□□□□ -0.35
HNRNPC-228ENST00000557033 DALRD3Q5D0E6 543 aaKnown RBP12.89□□□□□ -0.35
HNRNPC-228ENST00000557033 ARHGAP27Q6ZUM4 889 aa12.89□□□□□ -0.35
HNRNPC-228ENST00000557033 MIS18AQ9NYP9 233 aa12.89□□□□□ -0.35
HNRNPC-228ENST00000557033 BRCA1P38398 1863 aaKnown RBP12.89□□□□□ -0.35
HNRNPC-228ENST00000557033 NRXN2Q9P2S2 1712 aa12.88□□□□□ -0.35
HNRNPC-228ENST00000557033 PRAMEF22A3QJZ6 481 aa12.88□□□□□ -0.35
HNRNPC-228ENST00000557033 COL9A1P20849 921 aa12.88□□□□□ -0.35
HNRNPC-228ENST00000557033 USP46P62068 366 aa12.88□□□□□ -0.35
HNRNPC-228ENST00000557033 TBC1D9BQ66K14 1250 aa12.88□□□□□ -0.35
HNRNPC-228ENST00000557033 CLEC4GQ6UXB4 293 aa12.88□□□□□ -0.35
HNRNPC-228ENST00000557033 BICDL1Q6ZP65 573 aa12.88□□□□□ -0.35
HNRNPC-228ENST00000557033 DZIP3Q86Y13 1208 aaKnown RBP12.88□□□□□ -0.35
HNRNPC-228ENST00000557033 UCN2Q96RP3 112 aa12.88□□□□□ -0.35
HNRNPC-228ENST00000557033 SETDB2Q96T68 719 aa12.88□□□□□ -0.35
HNRNPC-228ENST00000557033 PDZRN3Q9UPQ7 1066 aa12.88□□□□□ -0.35
HNRNPC-228ENST00000557033 AFDNP55196 1824 aaKnown RBP12.88□□□□□ -0.35
HNRNPC-228ENST00000557033 ADCY9O60503 1353 aa12.87□□□□□ -0.35
HNRNPC-228ENST00000557033 GIGYF1O75420 1035 aaPredicted RBP12.87□□□□□ -0.35
HNRNPC-228ENST00000557033 CAMTA2O94983 1202 aa12.87□□□□□ -0.35
HNRNPC-228ENST00000557033 FDX1P10109 184 aa12.87□□□□□ -0.35
HNRNPC-228ENST00000557033 CHRNA5P30532 468 aa12.87□□□□□ -0.35
HNRNPC-228ENST00000557033 RIPK4P57078 832 aa12.87□□□□□ -0.35
HNRNPC-228ENST00000557033 C1QTNF8P60827 252 aa12.87□□□□□ -0.35
HNRNPC-228ENST00000557033 LMOD3Q0VAK6 560 aa12.87□□□□□ -0.35
HNRNPC-228ENST00000557033 BRIP1Q9BX63 1249 aa12.87□□□□□ -0.35
HNRNPC-228ENST00000557033 BABAM1Q9NWV8 329 aa12.87□□□□□ -0.35
HNRNPC-228ENST00000557033 ATP10DQ9P241 1426 aa12.87□□□□□ -0.35
HNRNPC-228ENST00000557033 ARFGEF1Q9Y6D6 1849 aa12.86□□□□□ -0.35
HNRNPC-228ENST00000557033 H0YIN7 160 aa12.86□□□□□ -0.35
HNRNPC-228ENST00000557033 C7P10643 843 aa12.86□□□□□ -0.35
HNRNPC-228ENST00000557033 TMPOP42166 694 aaKnown RBP12.86□□□□□ -0.35
HNRNPC-228ENST00000557033 EIF4A1P60842 406 aaKnown RBP12.86□□□□□ -0.35
HNRNPC-228ENST00000557033 RDH13Q8NBN7 331 aa12.86□□□□□ -0.35
HNRNPC-228ENST00000557033 PRKRIP1Q9H875 184 aaPredicted RBP12.86□□□□□ -0.35
HNRNPC-228ENST00000557033 PCDHGC3Q9UN70 934 aa12.86□□□□□ -0.35
HNRNPC-228ENST00000557033 ZNF652Q9Y2D9 606 aa12.86□□□□□ -0.35
HNRNPC-228ENST00000557033 CARMIL3Q8ND23 1372 aa12.85□□□□□ -0.35
HNRNPC-228ENST00000557033 NBPF26B4DH59 902 aa12.85□□□□□ -0.35
HNRNPC-228ENST00000557033 HOXA2O43364 376 aa12.85□□□□□ -0.35
HNRNPC-228ENST00000557033 SOX11P35716 441 aa12.85□□□□□ -0.35
HNRNPC-228ENST00000557033 PDE6BP35913 854 aa12.85□□□□□ -0.35
HNRNPC-228ENST00000557033 WDR43Q15061 677 aaKnown RBP eCLIP12.85□□□□□ -0.35
HNRNPC-228ENST00000557033 NBPF10Q6P3W6 841 aaKnown RBP12.85□□□□□ -0.35
HNRNPC-228ENST00000557033 C2CD5Q86YS7 1000 aa12.85□□□□□ -0.35
HNRNPC-228ENST00000557033 NBPF15Q8N660 670 aa12.85□□□□□ -0.35
HNRNPC-228ENST00000557033 PRR7Q8TB68 274 aa12.85□□□□□ -0.35
HNRNPC-228ENST00000557033 TATDN2Q93075 761 aa12.85□□□□□ -0.35
HNRNPC-228ENST00000557033 THUMPD2Q9BTF0 503 aaKnown RBP12.85□□□□□ -0.35
HNRNPC-228ENST00000557033 SCN7AQ01118 1682 aa12.84□□□□□ -0.35
HNRNPC-228ENST00000557033 GCGRP47871 477 aa12.84□□□□□ -0.35
HNRNPC-228ENST00000557033 PIP4K2AP48426 406 aaPredicted RBP12.84□□□□□ -0.35
HNRNPC-228ENST00000557033 PRR5LQ6MZQ0 368 aa12.84□□□□□ -0.35
HNRNPC-228ENST00000557033 TTLL6Q8N841 843 aa12.84□□□□□ -0.35
HNRNPC-228ENST00000557033 RUNDC1Q96C34 613 aa12.84□□□□□ -0.35
HNRNPC-228ENST00000557033 PNMA3Q9UL41 463 aa12.84□□□□□ -0.35
HNRNPC-228ENST00000557033 KDM3BQ7LBC6 1761 aa12.84□□□□□ -0.35
HNRNPC-228ENST00000557033 NUDT7P0C024 238 aa12.83□□□□□ -0.36
HNRNPC-228ENST00000557033 LRRN4Q8WUT4 740 aa12.83□□□□□ -0.36
HNRNPC-228ENST00000557033 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.83□□□□□ -0.36
HNRNPC-228ENST00000557033 TSPYL4Q9UJ04 414 aa12.83□□□□□ -0.36
HNRNPC-228ENST00000557033 ADAMTS8Q9UP79 889 aa12.83□□□□□ -0.36
HNRNPC-228ENST00000557033 GNEQ9Y223 722 aaKnown RBP12.83□□□□□ -0.36
HNRNPC-228ENST00000557033 ERVV-1B6SEH8 477 aa12.82□□□□□ -0.36
HNRNPC-228ENST00000557033 NPHP1O15259 732 aa12.82□□□□□ -0.36
HNRNPC-228ENST00000557033 ST5P78524 1137 aa12.82□□□□□ -0.36
HNRNPC-228ENST00000557033 TPTE2Q6XPS3 522 aa12.82□□□□□ -0.36
HNRNPC-228ENST00000557033 CNBD1Q8NA66 436 aa12.82□□□□□ -0.36
HNRNPC-228ENST00000557033 MAFBQ9Y5Q3 323 aaPredicted RBP12.82□□□□□ -0.36
HNRNPC-228ENST00000557033 ERBB4Q15303 1308 aa12.82□□□□□ -0.36
HNRNPC-228ENST00000557033 LAMB4A4D0S4 1761 aa12.81□□□□□ -0.36
HNRNPC-228ENST00000557033 BCORQ6W2J9 1755 aa12.81□□□□□ -0.36
HNRNPC-228ENST00000557033 C9orf131Q5VYM1 1079 aa12.81□□□□□ -0.36
HNRNPC-228ENST00000557033 CCDC146Q8IYE0 955 aa12.81□□□□□ -0.36
HNRNPC-228ENST00000557033 HELBQ8NG08 1087 aaPredicted RBP12.81□□□□□ -0.36
HNRNPC-228ENST00000557033 DLEC1Q9Y238 1755 aa12.81□□□□□ -0.36
HNRNPC-228ENST00000557033 NBPF5PQ86XG9 351 aaPredicted RBP12.8□□□□□ -0.36
HNRNPC-228ENST00000557033 EPS8L1Q8TE68 723 aa12.8□□□□□ -0.36
HNRNPC-228ENST00000557033 ZNF526Q8TF50 670 aaPredicted RBP12.8□□□□□ -0.36
HNRNPC-228ENST00000557033 KHSRPQ92945 711 aaKnown RBP eCLIP12.8□□□□□ -0.362e-9■■□□□ 11.8
HNRNPC-228ENST00000557033 CNKSR1Q969H4 720 aa12.8□□□□□ -0.36
HNRNPC-228ENST00000557033 ZNF622Q969S3 477 aaKnown RBP eCLIP12.8□□□□□ -0.36
HNRNPC-228ENST00000557033 NIP7Q9Y221 180 aaKnown RBP eCLIP12.8□□□□□ -0.36
HNRNPC-228ENST00000557033 RRP7AQ9Y3A4 280 aaKnown RBP12.8□□□□□ -0.36
HNRNPC-228ENST00000557033 ANKRD31Q8N7Z5 1873 aa12.79□□□□□ -0.36
HNRNPC-228ENST00000557033 CHL1O00533 1208 aa12.79□□□□□ -0.36
HNRNPC-228ENST00000557033 SRGNP10124 158 aa12.79□□□□□ -0.36
HNRNPC-228ENST00000557033 MTMR2Q13614 643 aa12.79□□□□□ -0.36
HNRNPC-228ENST00000557033 HLFQ16534 295 aa12.79□□□□□ -0.36
HNRNPC-228ENST00000557033 STYK1Q6J9G0 422 aa12.79□□□□□ -0.36
HNRNPC-228ENST00000557033 KIF6Q6ZMV9 814 aa12.79□□□□□ -0.36
HNRNPC-228ENST00000557033 PACS2Q86VP3 889 aa12.79□□□□□ -0.36
HNRNPC-228ENST00000557033 NGEFQ8N5V2 710 aa12.79□□□□□ -0.36
HNRNPC-228ENST00000557033 MAP3K15Q6ZN16 1313 aa12.79□□□□□ -0.36
HNRNPC-228ENST00000557033 KLRG2A4D1S0 409 aaPredicted RBP12.78□□□□□ -0.36
HNRNPC-228ENST00000557033 MYL6BP14649 208 aa12.78□□□□□ -0.36
HNRNPC-228ENST00000557033 GUCA2AQ02747 115 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms