RNA–Protein interactions for RNA: ENST00000556975.5

TMEM260-214, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-214ENST00000556975 COL13A1Q5TAT6 717 aaPredicted RBP28.9■■■□□ 2.22
TMEM260-214ENST00000556975 MAP1SQ66K74 1059 aaPredicted RBP28.9■■■□□ 2.22
TMEM260-214ENST00000556975 GREM2Q9H772 168 aa28.9■■■□□ 2.22
TMEM260-214ENST00000556975 ZC3H12CQ9C0D7 883 aaKnown RBP28.89■■■□□ 2.22
TMEM260-214ENST00000556975 DBNDD1Q9H9R9 158 aa28.89■■■□□ 2.22
TMEM260-214ENST00000556975 ANKIB1Q9P2G1 1089 aa28.89■■■□□ 2.22
TMEM260-214ENST00000556975 GGA1Q9UJY5 639 aa28.89■■■□□ 2.22
TMEM260-214ENST00000556975 BSDC1Q9NW68 430 aaPredicted RBP28.88■■■□□ 2.21
TMEM260-214ENST00000556975 CSF1RP07333 972 aa28.87■■■□□ 2.21
TMEM260-214ENST00000556975 BEND3Q5T5X7 828 aa28.87■■■□□ 2.21
TMEM260-214ENST00000556975 BCL2L13Q9BXK5 485 aa28.87■■■□□ 2.21
TMEM260-214ENST00000556975 XDHP47989 1333 aa28.87■■■□□ 2.21
TMEM260-214ENST00000556975 TMEM88BA6NKF7 163 aa28.86■■■□□ 2.21
TMEM260-214ENST00000556975 F6X3S4 739 aa28.86■■■□□ 2.21
TMEM260-214ENST00000556975 CCER2I3L3R5 266 aa28.86■■■□□ 2.21
TMEM260-214ENST00000556975 ECE2O60344 883 aa28.86■■■□□ 2.21
TMEM260-214ENST00000556975 UFL1O94874 794 aa28.86■■■□□ 2.21
TMEM260-214ENST00000556975 DPF2Q92785 391 aa28.86■■■□□ 2.21
TMEM260-214ENST00000556975 E9PSI1 815 aa28.85■■■□□ 2.21
TMEM260-214ENST00000556975 DOK7Q18PE1 504 aa28.85■■■□□ 2.21
TMEM260-214ENST00000556975 GPR101Q96P66 508 aaPredicted RBP28.85■■■□□ 2.21
TMEM260-214ENST00000556975 PSMD14O00487 310 aa28.84■■■□□ 2.21
TMEM260-214ENST00000556975 ATP2B4P23634 1241 aa28.84■■■□□ 2.21
TMEM260-214ENST00000556975 CNOT7Q9UIV1 285 aaKnown RBP28.84■■■□□ 2.21
TMEM260-214ENST00000556975 MINPP1Q9UNW1 487 aa28.84■■■□□ 2.21
TMEM260-214ENST00000556975 HSPA1AP0DMV8 641 aaKnown RBP28.83■■■□□ 2.21
TMEM260-214ENST00000556975 HSPA1BP0DMV9 641 aaKnown RBP28.83■■■□□ 2.21
TMEM260-214ENST00000556975 PGAP2Q9UHJ9 254 aa28.83■■■□□ 2.21
TMEM260-214ENST00000556975 H7C1D1 291 aa28.81■■■□□ 2.2
TMEM260-214ENST00000556975 ITGA6P23229 1130 aa28.81■■■□□ 2.2
TMEM260-214ENST00000556975 RPS12P25398 132 aaKnown RBP28.81■■■□□ 2.2
TMEM260-214ENST00000556975 SLFN5Q08AF3 891 aa28.81■■■□□ 2.2
TMEM260-214ENST00000556975 ZC3H15Q8WU90 426 aaKnown RBP28.81■■■□□ 2.2
TMEM260-214ENST00000556975 KCNQ5Q9NR82 932 aa28.81■■■□□ 2.2
TMEM260-214ENST00000556975 ZBTB12Q9Y330 459 aaPredicted RBP28.81■■■□□ 2.2
TMEM260-214ENST00000556975 IGHMBP2P38935 993 aaKnown RBP28.8■■■□□ 2.2
TMEM260-214ENST00000556975 MKRN1Q9UHC7 482 aaKnown RBP28.8■■■□□ 2.2
TMEM260-214ENST00000556975 CNTNAP1P78357 1384 aa28.79■■■□□ 2.2
TMEM260-214ENST00000556975 VIL1P09327 827 aaKnown RBP28.79■■■□□ 2.2
TMEM260-214ENST00000556975 HIRAP54198 1017 aaPredicted RBP28.79■■■□□ 2.2
TMEM260-214ENST00000556975 FAM161AQ3B820 660 aa28.79■■■□□ 2.2
TMEM260-214ENST00000556975 TNS4Q8IZW8 715 aa28.79■■■□□ 2.2
TMEM260-214ENST00000556975 G3V3G9 751 aa28.78■■■□□ 2.2
TMEM260-214ENST00000556975 CAPN15O75808 1086 aa28.78■■■□□ 2.2
TMEM260-214ENST00000556975 ALDH1L1O75891 902 aa28.78■■■□□ 2.2
TMEM260-214ENST00000556975 FOXO4P98177 505 aa28.78■■■□□ 2.2
TMEM260-214ENST00000556975 DCAF8Q5TAQ9 597 aa28.78■■■□□ 2.2
TMEM260-214ENST00000556975 MICALL2Q8IY33 904 aa28.78■■■□□ 2.2
TMEM260-214ENST00000556975 SCN9AQ15858 1988 aa28.77■■■□□ 2.2
TMEM260-214ENST00000556975 CCT4P50991 539 aaKnown RBP28.77■■■□□ 2.2
TMEM260-214ENST00000556975 MRPL50Q8N5N7 158 aaKnown RBP28.77■■■□□ 2.2
TMEM260-214ENST00000556975 SHTN1A0MZ66 631 aa28.76■■■□□ 2.19
TMEM260-214ENST00000556975 GRM8O00222 908 aa28.76■■■□□ 2.19
TMEM260-214ENST00000556975 PODNQ7Z5L7 613 aa28.76■■■□□ 2.19
TMEM260-214ENST00000556975 TRPM4Q8TD43 1214 aa28.76■■■□□ 2.19
TMEM260-214ENST00000556975 LEMD3Q9Y2U8 911 aa28.76■■■□□ 2.19
TMEM260-214ENST00000556975 SPEF2Q9C093 1822 aa28.76■■■□□ 2.19
TMEM260-214ENST00000556975 MED23Q9ULK4 1368 aa28.75■■■□□ 2.19
TMEM260-214ENST00000556975 WTIPA6NIX2 430 aaPredicted RBP28.75■■■□□ 2.19
TMEM260-214ENST00000556975 TRMT2AQ8IZ69 625 aaKnown RBP28.75■■■□□ 2.19
TMEM260-214ENST00000556975 MPHOSPH8Q99549 860 aa28.75■■■□□ 2.19
TMEM260-214ENST00000556975 SRCIN1Q9C0H9 1055 aa28.75■■■□□ 2.19
TMEM260-214ENST00000556975 ANKRD18BA2A2Z9 1011 aa28.74■■■□□ 2.19
TMEM260-214ENST00000556975 ANKRD2Q9GZV1 360 aa28.74■■■□□ 2.19
TMEM260-214ENST00000556975 ZNF609O15014 1411 aa28.74■■■□□ 2.19
TMEM260-214ENST00000556975 RASSF10A6NK89 507 aa28.73■■■□□ 2.19
TMEM260-214ENST00000556975 FMR1Q06787 632 aaKnown RBP eCLIP28.73■■■□□ 2.19
TMEM260-214ENST00000556975 SLC4A10Q6U841 1118 aa28.73■■■□□ 2.19
TMEM260-214ENST00000556975 C9orf78Q9NZ63 289 aaPredicted RBP28.73■■■□□ 2.19
TMEM260-214ENST00000556975 TRAF5O00463 557 aa28.72■■■□□ 2.19
TMEM260-214ENST00000556975 SAMD7Q7Z3H4 446 aa28.72■■■□□ 2.19
TMEM260-214ENST00000556975 AGBL3Q8NEM8 1001 aa28.72■■■□□ 2.19
TMEM260-214ENST00000556975 CDCA7LQ96GN5 454 aa28.72■■■□□ 2.19
TMEM260-214ENST00000556975 TRPM7Q96QT4 1865 aa28.72■■■□□ 2.19
TMEM260-214ENST00000556975 PTPRCP08575 1304 aa28.71■■■□□ 2.19
TMEM260-214ENST00000556975 PSME4Q14997 1843 aa28.71■■■□□ 2.19
TMEM260-214ENST00000556975 IFIT5Q13325 482 aaKnown RBP28.71■■■□□ 2.19
TMEM260-214ENST00000556975 DEFB115Q30KQ5 88 aa28.71■■■□□ 2.19
TMEM260-214ENST00000556975 CST9Q5W186 159 aa28.71■■■□□ 2.19
TMEM260-214ENST00000556975 RSBN1LQ6PCB5 846 aaPredicted RBP28.71■■■□□ 2.19
TMEM260-214ENST00000556975 CDC37L1Q7L3B6 337 aa28.71■■■□□ 2.19
TMEM260-214ENST00000556975 SSH1Q8WYL5 1049 aa28.71■■■□□ 2.19
TMEM260-214ENST00000556975 VEGFBP49765 207 aa28.7■■■□□ 2.18
TMEM260-214ENST00000556975 EPHA10Q5JZY3 1008 aa28.7■■■□□ 2.18
TMEM260-214ENST00000556975 LMBR1LQ6UX01 489 aa28.7■■■□□ 2.18
TMEM260-214ENST00000556975 ZNF804BA4D1E1 1349 aa28.69■■■□□ 2.18
TMEM260-214ENST00000556975 ALDH1L2Q3SY69 923 aa28.69■■■□□ 2.18
TMEM260-214ENST00000556975 GLIS2Q9BZE0 524 aaPredicted RBP28.69■■■□□ 2.18
TMEM260-214ENST00000556975 UTYO14607 1347 aa28.69■■■□□ 2.18
TMEM260-214ENST00000556975 USP17L3A6NCW0 530 aa28.68■■■□□ 2.18
TMEM260-214ENST00000556975 USP17L4A6NCW7 530 aa28.68■■■□□ 2.18
TMEM260-214ENST00000556975 EGFRP00533 1210 aa28.68■■■□□ 2.18
TMEM260-214ENST00000556975 CHRNDQ07001 517 aa28.68■■■□□ 2.18
TMEM260-214ENST00000556975 TBC1D10BQ4KMP7 808 aaPredicted RBP28.68■■■□□ 2.18
TMEM260-214ENST00000556975 USP17L1Q7RTZ2 530 aa28.68■■■□□ 2.18
TMEM260-214ENST00000556975 GMLQ99445 158 aa28.68■■■□□ 2.18
TMEM260-214ENST00000556975 COA1Q9GZY4 146 aa28.68■■■□□ 2.18
TMEM260-214ENST00000556975 ABT1Q9ULW3 272 aaKnown RBP28.68■■■□□ 2.18
TMEM260-214ENST00000556975 ZNF280AP59817 542 aaPredicted RBP28.67■■■□□ 2.18
TMEM260-214ENST00000556975 TXNRD3Q86VQ6 643 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms