RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 XDHP47989 1333 aa13.43□□□□□ -0.26
LINC00239-201ENST00000556973 KIF3CO14782 793 aa13.43□□□□□ -0.26
LINC00239-201ENST00000556973 DDNO94850 711 aaPredicted RBP13.43□□□□□ -0.26
LINC00239-201ENST00000556973 TRIM27P14373 513 aa13.43□□□□□ -0.26
LINC00239-201ENST00000556973 VEGFAP15692 232 aaPredicted RBP13.43□□□□□ -0.26
LINC00239-201ENST00000556973 ATP2B4P23634 1241 aa13.43□□□□□ -0.26
LINC00239-201ENST00000556973 EIF6P56537 245 aaKnown RBP13.43□□□□□ -0.26
LINC00239-201ENST00000556973 RABL6Q3YEC7 729 aaPredicted RBP13.43□□□□□ -0.26
LINC00239-201ENST00000556973 WDR90Q96KV7 1748 aa13.43□□□□□ -0.26
LINC00239-201ENST00000556973 ZC3H12CQ9C0D7 883 aaKnown RBP13.43□□□□□ -0.26
LINC00239-201ENST00000556973 ANKRD2Q9GZV1 360 aa13.43□□□□□ -0.26
LINC00239-201ENST00000556973 NMRK2Q9NPI5 230 aa13.43□□□□□ -0.26
LINC00239-201ENST00000556973 DUOX1Q9NRD9 1551 aa13.43□□□□□ -0.26
LINC00239-201ENST00000556973 GGA1Q9UJY5 639 aa13.43□□□□□ -0.26
LINC00239-201ENST00000556973 RIMBP2O15034 1052 aa13.42□□□□□ -0.26
LINC00239-201ENST00000556973 UBTFL1P0CB47 393 aaPredicted RBP13.42□□□□□ -0.26
LINC00239-201ENST00000556973 TAF7LQ5H9L4 462 aa13.42□□□□□ -0.26
LINC00239-201ENST00000556973 GPC2Q8N158 579 aa13.42□□□□□ -0.26
LINC00239-201ENST00000556973 BICC1Q9H694 974 aaKnown RBP13.42□□□□□ -0.26
LINC00239-201ENST00000556973 ZNRF3Q9ULT6 936 aa13.42□□□□□ -0.26
LINC00239-201ENST00000556973 COL4A5P29400 1685 aa13.42□□□□□ -0.26
LINC00239-201ENST00000556973 UFL1O94874 794 aa13.41□□□□□ -0.26
LINC00239-201ENST00000556973 GNAI3P08754 354 aa13.41□□□□□ -0.26
LINC00239-201ENST00000556973 LDHAL6AQ6ZMR3 332 aa13.41□□□□□ -0.26
LINC00239-201ENST00000556973 CLUAP1Q96AJ1 413 aa13.41□□□□□ -0.26
LINC00239-201ENST00000556973 LEMD3Q9Y2U8 911 aa13.41□□□□□ -0.26
LINC00239-201ENST00000556973 SCN4AP35499 1836 aa13.41□□□□□ -0.26
LINC00239-201ENST00000556973 ZNF541Q9H0D2 1346 aa13.4□□□□□ -0.26
LINC00239-201ENST00000556973 POTECB2RU33 542 aa13.4□□□□□ -0.26
LINC00239-201ENST00000556973 G3V3G9 751 aa13.4□□□□□ -0.26
LINC00239-201ENST00000556973 DCAF8Q5TAQ9 597 aa13.4□□□□□ -0.26
LINC00239-201ENST00000556973 C16orf71Q8IYS4 520 aaPredicted RBP13.4□□□□□ -0.26
LINC00239-201ENST00000556973 ANKRD44Q8N8A2 993 aa13.4□□□□□ -0.26
LINC00239-201ENST00000556973 L3MBTL3Q96JM7 780 aaPredicted RBP13.4□□□□□ -0.26
LINC00239-201ENST00000556973 CNNM1Q9NRU3 951 aa13.4□□□□□ -0.26
LINC00239-201ENST00000556973 TOMM70O94826 608 aa13.39□□□□□ -0.27
LINC00239-201ENST00000556973 CHRNDQ07001 517 aa13.39□□□□□ -0.27
LINC00239-201ENST00000556973 TNIP1Q15025 636 aa13.39□□□□□ -0.27
LINC00239-201ENST00000556973 FTSJ3Q8IY81 847 aaKnown RBP13.39□□□□□ -0.27
LINC00239-201ENST00000556973 DZIP1LQ8IYY4 767 aaKnown RBP13.39□□□□□ -0.27
LINC00239-201ENST00000556973 ZNF594Q96JF6 807 aaPredicted RBP13.39□□□□□ -0.27
LINC00239-201ENST00000556973 MEIS3Q99687 375 aa13.39□□□□□ -0.27
LINC00239-201ENST00000556973 RCAN3Q9UKA8 241 aa13.39□□□□□ -0.27
LINC00239-201ENST00000556973 TNNQ9UQP3 1299 aa13.39□□□□□ -0.27
LINC00239-201ENST00000556973 A0A1B0GUL6 1792 aa13.38□□□□□ -0.27
LINC00239-201ENST00000556973 IQCA1LA6NCM1 817 aa13.38□□□□□ -0.27
LINC00239-201ENST00000556973 MS4A1P11836 297 aa13.38□□□□□ -0.27
LINC00239-201ENST00000556973 C1QTNF8P60827 252 aa13.38□□□□□ -0.27
LINC00239-201ENST00000556973 CXCL9Q07325 125 aa13.38□□□□□ -0.27
LINC00239-201ENST00000556973 DOK7Q18PE1 504 aa13.38□□□□□ -0.27
LINC00239-201ENST00000556973 TMEM57Q8N5G2 664 aa13.38□□□□□ -0.27
LINC00239-201ENST00000556973 GPR101Q96P66 508 aaPredicted RBP13.38□□□□□ -0.27
LINC00239-201ENST00000556973 DBNDD1Q9H9R9 158 aa13.38□□□□□ -0.27
LINC00239-201ENST00000556973 GJA3Q9Y6H8 435 aa13.38□□□□□ -0.27
LINC00239-201ENST00000556973 ZNF804BA4D1E1 1349 aa13.38□□□□□ -0.27
LINC00239-201ENST00000556973 YDJCA8MPS7 323 aa13.37□□□□□ -0.27
LINC00239-201ENST00000556973 ECE2O60344 883 aa13.37□□□□□ -0.27
LINC00239-201ENST00000556973 CIAPIN1Q6FI81 312 aa13.37□□□□□ -0.27
LINC00239-201ENST00000556973 RIPOR2Q9Y4F9 1068 aa13.37□□□□□ -0.27
LINC00239-201ENST00000556973 LRRFIP2Q9Y608 721 aaKnown RBP13.37□□□□□ -0.27
LINC00239-201ENST00000556973 MROH5Q6ZUA9 1318 aa13.37□□□□□ -0.27
LINC00239-201ENST00000556973 MED23Q9ULK4 1368 aa13.36□□□□□ -0.27
LINC00239-201ENST00000556973 WTIPA6NIX2 430 aaPredicted RBP13.36□□□□□ -0.27
LINC00239-201ENST00000556973 TAF5LO75529 589 aa13.36□□□□□ -0.27
LINC00239-201ENST00000556973 KCNJ4P48050 445 aa13.36□□□□□ -0.27
LINC00239-201ENST00000556973 PODNQ7Z5L7 613 aa13.36□□□□□ -0.27
LINC00239-201ENST00000556973 RBM46Q8TBY0 533 aaKnown RBP13.36□□□□□ -0.27
LINC00239-201ENST00000556973 YTHDC1Q96MU7 727 aaKnown RBP13.36□□□□□ -0.27
LINC00239-201ENST00000556973 HACL1Q9UJ83 578 aa13.36□□□□□ -0.27
LINC00239-201ENST00000556973 ZBTB7BO15156 539 aaPredicted RBP13.35□□□□□ -0.27
LINC00239-201ENST00000556973 PLIN1O60240 522 aa13.35□□□□□ -0.27
LINC00239-201ENST00000556973 RAD17O75943 681 aa13.35□□□□□ -0.27
LINC00239-201ENST00000556973 GNAI2P04899 355 aa13.35□□□□□ -0.27
LINC00239-201ENST00000556973 LMOD1P29536 600 aaPredicted RBP13.35□□□□□ -0.27
LINC00239-201ENST00000556973 RFX5P48382 616 aaPredicted RBP13.35□□□□□ -0.27
LINC00239-201ENST00000556973 HELBQ8NG08 1087 aaPredicted RBP13.35□□□□□ -0.27
LINC00239-201ENST00000556973 PUS3Q9BZE2 481 aaKnown RBP13.35□□□□□ -0.27
LINC00239-201ENST00000556973 COA1Q9GZY4 146 aa13.35□□□□□ -0.27
LINC00239-201ENST00000556973 TAF1DQ9H5J8 278 aaPredicted RBP13.35□□□□□ -0.27
LINC00239-201ENST00000556973 RLBP1P12271 317 aa13.34□□□□□ -0.27
LINC00239-201ENST00000556973 PTPN12Q05209 780 aaKnown RBP13.34□□□□□ -0.27
LINC00239-201ENST00000556973 FSTL1Q12841 308 aa13.34□□□□□ -0.27
LINC00239-201ENST00000556973 LRRC24Q50LG9 513 aa13.34□□□□□ -0.27
LINC00239-201ENST00000556973 C15orf52Q6ZUT6 534 aaKnown RBP13.34□□□□□ -0.27
LINC00239-201ENST00000556973 PNMA8AQ86V59 439 aaPredicted RBP13.34□□□□□ -0.27
LINC00239-201ENST00000556973 ITPRIPQ8IWB1 547 aa13.34□□□□□ -0.27
LINC00239-201ENST00000556973 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.34□□□□□ -0.27
LINC00239-201ENST00000556973 KLHDC4Q8TBB5 520 aa13.34□□□□□ -0.27
LINC00239-201ENST00000556973 FBXO3Q9UK99 471 aa13.34□□□□□ -0.27
LINC00239-201ENST00000556973 PSME4Q14997 1843 aa13.34□□□□□ -0.27
LINC00239-201ENST00000556973 EYA2O00167 538 aa13.33□□□□□ -0.28
LINC00239-201ENST00000556973 VIL1P09327 827 aaKnown RBP13.33□□□□□ -0.28
LINC00239-201ENST00000556973 EPHX2P34913 555 aa13.33□□□□□ -0.28
LINC00239-201ENST00000556973 SCNN1DP51172 638 aa13.33□□□□□ -0.28
LINC00239-201ENST00000556973 MTX1Q13505 466 aa13.33□□□□□ -0.28
LINC00239-201ENST00000556973 UBE4AQ14139 1066 aa13.33□□□□□ -0.28
LINC00239-201ENST00000556973 TXNRD3Q86VQ6 643 aa13.33□□□□□ -0.28
LINC00239-201ENST00000556973 SMC1BQ8NDV3 1235 aa13.33□□□□□ -0.28
LINC00239-201ENST00000556973 DPF2Q92785 391 aa13.33□□□□□ -0.28
LINC00239-201ENST00000556973 KCNQ5Q9NR82 932 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms