RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 XDHP47989 1333 aa13.71□□□□□ -0.21
XRCC3-216ENST00000556682 ATP2B4P23634 1241 aa13.71□□□□□ -0.21
XRCC3-216ENST00000556682 IGHMBP2P38935 993 aaKnown RBP13.71□□□□□ -0.21
XRCC3-216ENST00000556682 GMPSP49915 693 aaPredicted RBP13.71□□□□□ -0.21
XRCC3-216ENST00000556682 GREM2Q9H772 168 aa13.71□□□□□ -0.21
XRCC3-216ENST00000556682 DBNDD1Q9H9R9 158 aa13.71□□□□□ -0.21
XRCC3-216ENST00000556682 COL4A5P29400 1685 aa13.71□□□□□ -0.21
XRCC3-216ENST00000556682 RTL9Q8NET4 1388 aa13.71□□□□□ -0.22
XRCC3-216ENST00000556682 YDJCA8MPS7 323 aa13.7□□□□□ -0.22
XRCC3-216ENST00000556682 F6X3S4 739 aa13.7□□□□□ -0.22
XRCC3-216ENST00000556682 H7C1D1 291 aa13.7□□□□□ -0.22
XRCC3-216ENST00000556682 ECE2O60344 883 aa13.7□□□□□ -0.22
XRCC3-216ENST00000556682 ITGBL1O95965 494 aaPredicted RBP13.7□□□□□ -0.22
XRCC3-216ENST00000556682 BEND3Q5T5X7 828 aa13.7□□□□□ -0.22
XRCC3-216ENST00000556682 MAP1SQ66K74 1059 aaPredicted RBP13.7□□□□□ -0.22
XRCC3-216ENST00000556682 MPHOSPH8Q99549 860 aa13.7□□□□□ -0.22
XRCC3-216ENST00000556682 PASKQ96RG2 1323 aa13.69□□□□□ -0.22
XRCC3-216ENST00000556682 CEP350Q5VT06 3117 aa13.69□□□□□ -0.22
XRCC3-216ENST00000556682 TMEM88BA6NKF7 163 aa13.69□□□□□ -0.22
XRCC3-216ENST00000556682 RPS12P25398 132 aaKnown RBP13.69□□□□□ -0.22
XRCC3-216ENST00000556682 DOK7Q18PE1 504 aa13.69□□□□□ -0.22
XRCC3-216ENST00000556682 SLC4A10Q6U841 1118 aa13.69□□□□□ -0.22
XRCC3-216ENST00000556682 JMYQ8N9B5 988 aa13.69□□□□□ -0.22
XRCC3-216ENST00000556682 DPF2Q92785 391 aa13.69□□□□□ -0.22
XRCC3-216ENST00000556682 CNOT7Q9UIV1 285 aaKnown RBP13.69□□□□□ -0.22
XRCC3-216ENST00000556682 PSMD14O00487 310 aa13.68□□□□□ -0.22
XRCC3-216ENST00000556682 ALDH1L1O75891 902 aa13.68□□□□□ -0.22
XRCC3-216ENST00000556682 CSF1RP07333 972 aa13.68□□□□□ -0.22
XRCC3-216ENST00000556682 ITGA6P23229 1130 aa13.68□□□□□ -0.22
XRCC3-216ENST00000556682 CASP7P55210 303 aa13.68□□□□□ -0.22
XRCC3-216ENST00000556682 SLFN5Q08AF3 891 aa13.68□□□□□ -0.22
XRCC3-216ENST00000556682 C9orf78Q9NZ63 289 aaPredicted RBP13.68□□□□□ -0.22
XRCC3-216ENST00000556682 MINPP1Q9UNW1 487 aa13.68□□□□□ -0.22
XRCC3-216ENST00000556682 ANKRD18BA2A2Z9 1011 aa13.67□□□□□ -0.22
XRCC3-216ENST00000556682 GRM8O00222 908 aa13.67□□□□□ -0.22
XRCC3-216ENST00000556682 PODNQ7Z5L7 613 aa13.67□□□□□ -0.22
XRCC3-216ENST00000556682 ZC3H15Q8WU90 426 aaKnown RBP13.67□□□□□ -0.22
XRCC3-216ENST00000556682 SRCIN1Q9C0H9 1055 aa13.67□□□□□ -0.22
XRCC3-216ENST00000556682 ANKRD2Q9GZV1 360 aa13.67□□□□□ -0.22
XRCC3-216ENST00000556682 LRRC37AA6NMS7 1700 aa13.67□□□□□ -0.22
XRCC3-216ENST00000556682 IFIT5Q13325 482 aaKnown RBP13.66□□□□□ -0.22
XRCC3-216ENST00000556682 FAM161AQ3B820 660 aa13.66□□□□□ -0.22
XRCC3-216ENST00000556682 MICALL2Q8IY33 904 aa13.66□□□□□ -0.22
XRCC3-216ENST00000556682 GPR101Q96P66 508 aaPredicted RBP13.66□□□□□ -0.22
XRCC3-216ENST00000556682 LEMD3Q9Y2U8 911 aa13.66□□□□□ -0.22
XRCC3-216ENST00000556682 ZBTB12Q9Y330 459 aaPredicted RBP13.66□□□□□ -0.22
XRCC3-216ENST00000556682 CHMP3Q9Y3E7 222 aa13.66□□□□□ -0.22
XRCC3-216ENST00000556682 DUOX1Q9NRD9 1551 aa13.66□□□□□ -0.22
XRCC3-216ENST00000556682 PTPRCP08575 1304 aa13.65□□□□□ -0.22
XRCC3-216ENST00000556682 TAF1P21675 1872 aa13.65□□□□□ -0.22
XRCC3-216ENST00000556682 CACNA1FO60840 1977 aa13.65□□□□□ -0.22
XRCC3-216ENST00000556682 VIL1P09327 827 aaKnown RBP13.65□□□□□ -0.22
XRCC3-216ENST00000556682 CT47B1P0C2W7 299 aaPredicted RBP13.65□□□□□ -0.22
XRCC3-216ENST00000556682 CCT4P50991 539 aaKnown RBP13.65□□□□□ -0.22
XRCC3-216ENST00000556682 ALDH1L2Q3SY69 923 aa13.65□□□□□ -0.22
XRCC3-216ENST00000556682 MRPL50Q8N5N7 158 aaKnown RBP13.65□□□□□ -0.22
XRCC3-216ENST00000556682 MKRN1Q9UHC7 482 aaKnown RBP13.65□□□□□ -0.22
XRCC3-216ENST00000556682 KCNJ4P48050 445 aa13.64□□□□□ -0.23
XRCC3-216ENST00000556682 FOXO4P98177 505 aa13.64□□□□□ -0.23
XRCC3-216ENST00000556682 CCDC57Q2TAC2 916 aa13.64□□□□□ -0.23
XRCC3-216ENST00000556682 TAF7LQ5H9L4 462 aa13.64□□□□□ -0.23
XRCC3-216ENST00000556682 AGBL3Q8NEM8 1001 aa13.64□□□□□ -0.23
XRCC3-216ENST00000556682 KCNQ5Q9NR82 932 aa13.64□□□□□ -0.23
XRCC3-216ENST00000556682 PGAP2Q9UHJ9 254 aa13.64□□□□□ -0.23
XRCC3-216ENST00000556682 MED23Q9ULK4 1368 aa13.63□□□□□ -0.23
XRCC3-216ENST00000556682 USP17L3A6NCW0 530 aa13.63□□□□□ -0.23
XRCC3-216ENST00000556682 USP17L4A6NCW7 530 aa13.63□□□□□ -0.23
XRCC3-216ENST00000556682 LMBR1LQ6UX01 489 aa13.63□□□□□ -0.23
XRCC3-216ENST00000556682 CDC37L1Q7L3B6 337 aa13.63□□□□□ -0.23
XRCC3-216ENST00000556682 USP17L1Q7RTZ2 530 aa13.63□□□□□ -0.23
XRCC3-216ENST00000556682 SSH1Q8WYL5 1049 aa13.63□□□□□ -0.23
XRCC3-216ENST00000556682 CDCA7LQ96GN5 454 aa13.63□□□□□ -0.23
XRCC3-216ENST00000556682 COA1Q9GZY4 146 aa13.63□□□□□ -0.23
XRCC3-216ENST00000556682 ABT1Q9ULW3 272 aaKnown RBP13.63□□□□□ -0.23
XRCC3-216ENST00000556682 ZNF804BA4D1E1 1349 aa13.63□□□□□ -0.23
XRCC3-216ENST00000556682 CNTNAP1P78357 1384 aa13.62□□□□□ -0.23
XRCC3-216ENST00000556682 HIRAP54198 1017 aaPredicted RBP13.62□□□□□ -0.23
XRCC3-216ENST00000556682 CHRNDQ07001 517 aa13.62□□□□□ -0.23
XRCC3-216ENST00000556682 DEFB115Q30KQ5 88 aa13.62□□□□□ -0.23
XRCC3-216ENST00000556682 RBM26Q5T8P6 1007 aaKnown RBP13.62□□□□□ -0.23
XRCC3-216ENST00000556682 RSBN1LQ6PCB5 846 aaPredicted RBP13.62□□□□□ -0.23
XRCC3-216ENST00000556682 SAMD7Q7Z3H4 446 aa13.62□□□□□ -0.23
XRCC3-216ENST00000556682 TRMT2AQ8IZ69 625 aaKnown RBP13.62□□□□□ -0.23
XRCC3-216ENST00000556682 TRPM4Q8TD43 1214 aa13.62□□□□□ -0.23
XRCC3-216ENST00000556682 COL4A1P02462 1669 aa13.62□□□□□ -0.23
XRCC3-216ENST00000556682 LTBP1Q14766 1721 aa13.61□□□□□ -0.23
XRCC3-216ENST00000556682 ADAMTSL1Q8N6G6 1762 aa13.61□□□□□ -0.23
XRCC3-216ENST00000556682 RASSF10A6NK89 507 aa13.61□□□□□ -0.23
XRCC3-216ENST00000556682 TBC1D10BQ4KMP7 808 aaPredicted RBP13.61□□□□□ -0.23
XRCC3-216ENST00000556682 LDHAL6AQ6ZMR3 332 aa13.61□□□□□ -0.23
XRCC3-216ENST00000556682 DCPSQ96C86 337 aaKnown RBP13.61□□□□□ -0.23
XRCC3-216ENST00000556682 SMC4Q9NTJ3 1288 aa13.61□□□□□ -0.23
XRCC3-216ENST00000556682 SHTN1A0MZ66 631 aa13.6□□□□□ -0.23
XRCC3-216ENST00000556682 TRAF5O00463 557 aa13.6□□□□□ -0.23
XRCC3-216ENST00000556682 USP17L8P0C7I0 530 aa13.6□□□□□ -0.23
XRCC3-216ENST00000556682 MMP14P50281 582 aa13.6□□□□□ -0.23
XRCC3-216ENST00000556682 KIF4BQ2VIQ3 1234 aa13.6□□□□□ -0.23
XRCC3-216ENST00000556682 DIEXFQ68CQ4 756 aaKnown RBP13.6□□□□□ -0.23
XRCC3-216ENST00000556682 GLIS2Q9BZE0 524 aaPredicted RBP13.6□□□□□ -0.23
XRCC3-216ENST00000556682 CNNM1Q9NRU3 951 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms