RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 DBF4Q9UBU7 674 aaPredicted RBP9.97□□□□□ -0.81
HNRNPC-226ENST00000556628 ANP32CO43423 234 aa9.96□□□□□ -0.82
HNRNPC-226ENST00000556628 KRT24Q2M2I5 525 aa9.96□□□□□ -0.82
HNRNPC-226ENST00000556628 GRIPAP1Q4V328 841 aa9.96□□□□□ -0.82
HNRNPC-226ENST00000556628 LRP10Q7Z4F1 713 aa9.96□□□□□ -0.82
HNRNPC-226ENST00000556628 SYNE4Q8N205 404 aa9.96□□□□□ -0.82
HNRNPC-226ENST00000556628 CRAMP1Q96RY5 1269 aa9.96□□□□□ -0.82
HNRNPC-226ENST00000556628 IFT57Q9NWB7 429 aa9.96□□□□□ -0.82
HNRNPC-226ENST00000556628 HYPKQ9NX55 129 aa9.96□□□□□ -0.82
HNRNPC-226ENST00000556628 HCSTQ9UBK5 93 aa9.96□□□□□ -0.82
HNRNPC-226ENST00000556628 IQCA1LA6NCM1 817 aa9.95□□□□□ -0.82
HNRNPC-226ENST00000556628 PPEF1O14829 653 aaPredicted RBP9.95□□□□□ -0.82
HNRNPC-226ENST00000556628 DDNO94850 711 aaPredicted RBP9.95□□□□□ -0.82
HNRNPC-226ENST00000556628 HOXA10P31260 410 aaPredicted RBP9.95□□□□□ -0.82
HNRNPC-226ENST00000556628 FOXK1P85037 733 aa9.95□□□□□ -0.82
HNRNPC-226ENST00000556628 TCIRG1Q13488 830 aa9.95□□□□□ -0.82
HNRNPC-226ENST00000556628 DUSP27Q5VZP5 1158 aa9.95□□□□□ -0.82
HNRNPC-226ENST00000556628 NLRP10Q86W26 655 aa9.95□□□□□ -0.82
HNRNPC-226ENST00000556628 PLBD2Q8NHP8 589 aa9.95□□□□□ -0.82
HNRNPC-226ENST00000556628 JDP2Q8WYK2 163 aa9.95□□□□□ -0.82
HNRNPC-226ENST00000556628 ZNF277Q9NRM2 450 aaPredicted RBP9.95□□□□□ -0.82
HNRNPC-226ENST00000556628 MBIPQ9NS73 344 aa9.95□□□□□ -0.82
HNRNPC-226ENST00000556628 TRMT112Q9UI30 125 aaKnown RBP9.95□□□□□ -0.82
HNRNPC-226ENST00000556628 TCERG1O14776 1098 aaKnown RBP9.94□□□□□ -0.82
HNRNPC-226ENST00000556628 IARSP41252 1262 aaKnown RBP9.94□□□□□ -0.82
HNRNPC-226ENST00000556628 SLC10A5Q5PT55 438 aa9.94□□□□□ -0.82
HNRNPC-226ENST00000556628 OLFM4Q6UX06 510 aa9.94□□□□□ -0.82
HNRNPC-226ENST00000556628 PLPP6Q8IY26 295 aa9.94□□□□□ -0.82
HNRNPC-226ENST00000556628 PSMD1Q99460 953 aa9.94□□□□□ -0.82
HNRNPC-226ENST00000556628 SCN4AP35499 1836 aa9.93□□□□□ -0.82
HNRNPC-226ENST00000556628 SH3TC1Q8TE82 1336 aa9.93□□□□□ -0.82
HNRNPC-226ENST00000556628 ELL2O00472 640 aaPredicted RBP9.93□□□□□ -0.82
HNRNPC-226ENST00000556628 ZNF853P0CG23 659 aa9.93□□□□□ -0.82
HNRNPC-226ENST00000556628 EIF6P56537 245 aaKnown RBP9.93□□□□□ -0.82
HNRNPC-226ENST00000556628 DDX46Q7L014 1031 aaKnown RBP9.93□□□□□ -0.82
HNRNPC-226ENST00000556628 RIC3Q7Z5B4 369 aa9.93□□□□□ -0.82
HNRNPC-226ENST00000556628 GPHNQ9NQX3 736 aaPredicted RBP9.93□□□□□ -0.82
HNRNPC-226ENST00000556628 LAMB2P55268 1798 aa9.93□□□□□ -0.82
HNRNPC-226ENST00000556628 POTECB2RU33 542 aa9.92□□□□□ -0.82
HNRNPC-226ENST00000556628 TK2O00142 265 aa9.92□□□□□ -0.82
HNRNPC-226ENST00000556628 TBC1D12O60347 775 aa9.92□□□□□ -0.82
HNRNPC-226ENST00000556628 HCLS1P14317 486 aaPredicted RBP9.92□□□□□ -0.82
HNRNPC-226ENST00000556628 CCDC30Q5VVM6 783 aa9.92□□□□□ -0.82
HNRNPC-226ENST00000556628 LARGE2Q8N3Y3 721 aa9.92□□□□□ -0.82
HNRNPC-226ENST00000556628 MRS2Q9HD23 443 aa9.92□□□□□ -0.82
HNRNPC-226ENST00000556628 PLA2G2EQ9NZK7 142 aa9.92□□□□□ -0.82
HNRNPC-226ENST00000556628 ABCC4O15439 1325 aa9.91□□□□□ -0.82
HNRNPC-226ENST00000556628 BBOX1O75936 387 aa9.91□□□□□ -0.82
HNRNPC-226ENST00000556628 DDX58O95786 925 aaKnown RBP9.91□□□□□ -0.82
HNRNPC-226ENST00000556628 HSP90B1P14625 803 aaKnown RBP9.91□□□□□ -0.82
HNRNPC-226ENST00000556628 PPP4R3BQ5MIZ7 849 aa9.91□□□□□ -0.82
HNRNPC-226ENST00000556628 SUPT20HQ8NEM7 779 aa9.91□□□□□ -0.82
HNRNPC-226ENST00000556628 HACL1Q9UJ83 578 aa9.91□□□□□ -0.82
HNRNPC-226ENST00000556628 ATP6V0A2Q9Y487 856 aa9.91□□□□□ -0.82
HNRNPC-226ENST00000556628 ZNF541Q9H0D2 1346 aa9.9□□□□□ -0.82
HNRNPC-226ENST00000556628 ATP5J2-PTCD1G3V325 749 aa9.9□□□□□ -0.82
HNRNPC-226ENST00000556628 FZD9O00144 591 aa9.9□□□□□ -0.82
HNRNPC-226ENST00000556628 GRAPQ13588 217 aa9.9□□□□□ -0.82
HNRNPC-226ENST00000556628 CCDC27Q2M243 656 aa9.9□□□□□ -0.82
HNRNPC-226ENST00000556628 CCDC184Q52MB2 194 aa9.9□□□□□ -0.82
HNRNPC-226ENST00000556628 EAPPQ56P03 285 aaPredicted RBP9.9□□□□□ -0.82
HNRNPC-226ENST00000556628 TMC4Q7Z404 712 aa9.9□□□□□ -0.82
HNRNPC-226ENST00000556628 SP8Q8IXZ3 490 aa9.9□□□□□ -0.82
HNRNPC-226ENST00000556628 NIM1KQ8IY84 436 aa9.9□□□□□ -0.82
HNRNPC-226ENST00000556628 GPC2Q8N158 579 aa9.9□□□□□ -0.82
HNRNPC-226ENST00000556628 GRAPLQ8TC17 118 aaPredicted RBP9.9□□□□□ -0.82
HNRNPC-226ENST00000556628 ISCA1Q9BUE6 129 aa9.9□□□□□ -0.82
HNRNPC-226ENST00000556628 STK31Q9BXU1 1019 aa9.9□□□□□ -0.82
HNRNPC-226ENST00000556628 VPS33BQ9H267 617 aa9.9□□□□□ -0.82
HNRNPC-226ENST00000556628 GJA3Q9Y6H8 435 aa9.9□□□□□ -0.82
HNRNPC-226ENST00000556628 DDX60Q8IY21 1712 aaKnown RBP9.9□□□□□ -0.83
HNRNPC-226ENST00000556628 PPIP5K2O43314 1243 aa9.89□□□□□ -0.83
HNRNPC-226ENST00000556628 LMOD1P29536 600 aaPredicted RBP9.89□□□□□ -0.83
HNRNPC-226ENST00000556628 HTRA3P83110 453 aa9.89□□□□□ -0.83
HNRNPC-226ENST00000556628 TRIM28Q13263 835 aaKnown RBP9.89□□□□□ -0.83
HNRNPC-226ENST00000556628 RTL5Q5HYW3 569 aaPredicted RBP9.89□□□□□ -0.83
HNRNPC-226ENST00000556628 DMRTA1Q5VZB9 504 aa9.89□□□□□ -0.83
HNRNPC-226ENST00000556628 DPP8Q6V1X1 898 aaPredicted RBP9.89□□□□□ -0.83
HNRNPC-226ENST00000556628 PNMA8AQ86V59 439 aaPredicted RBP9.89□□□□□ -0.83
HNRNPC-226ENST00000556628 LDHDQ86WU2 507 aa9.89□□□□□ -0.83
HNRNPC-226ENST00000556628 MPNDQ8N594 471 aa9.89□□□□□ -0.83
HNRNPC-226ENST00000556628 C8orf58Q8NAV2 365 aa9.89□□□□□ -0.83
HNRNPC-226ENST00000556628 KLRG1Q96E93 195 aa9.89□□□□□ -0.83
HNRNPC-226ENST00000556628 FAM89AQ96GI7 184 aa9.89□□□□□ -0.83
HNRNPC-226ENST00000556628 TAF1DQ9H5J8 278 aaPredicted RBP9.89□□□□□ -0.83
HNRNPC-226ENST00000556628 PHAXQ9H814 394 aaKnown RBP9.89□□□□□ -0.83
HNRNPC-226ENST00000556628 SNED1Q8TER0 1413 aa9.89□□□□□ -0.83
HNRNPC-226ENST00000556628 IL16Q14005 1332 aa9.88□□□□□ -0.83
HNRNPC-226ENST00000556628 IRS4O14654 1257 aaPredicted RBP9.88□□□□□ -0.83
HNRNPC-226ENST00000556628 EPHX2P34913 555 aa9.88□□□□□ -0.83
HNRNPC-226ENST00000556628 PSEN2P49810 448 aa9.88□□□□□ -0.83
HNRNPC-226ENST00000556628 DSG2Q14126 1118 aa9.88□□□□□ -0.83
HNRNPC-226ENST00000556628 AOC3Q16853 763 aa9.88□□□□□ -0.83
HNRNPC-226ENST00000556628 WWC1Q8IX03 1113 aa9.88□□□□□ -0.83
HNRNPC-226ENST00000556628 DNAJC5GQ8N7S2 189 aa9.88□□□□□ -0.83
HNRNPC-226ENST00000556628 ZNF428Q96B54 188 aa9.88□□□□□ -0.83
HNRNPC-226ENST00000556628 MYD88Q99836 296 aa9.88□□□□□ -0.83
HNRNPC-226ENST00000556628 TAF1P21675 1872 aa9.87□□□□□ -0.83
HNRNPC-226ENST00000556628 HRO43593 1189 aa9.87□□□□□ -0.83
HNRNPC-226ENST00000556628 NEXNQ0ZGT2 675 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms