RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 ZBTB12Q9Y330 459 aaPredicted RBP13.53□□□□□ -0.24
SPTLC2-205ENST00000556607 FANCIQ9NVI1 1328 aa13.53□□□□□ -0.24
SPTLC2-205ENST00000556607 CACNA1FO60840 1977 aa13.52□□□□□ -0.24
SPTLC2-205ENST00000556607 PSMD14O00487 310 aa13.52□□□□□ -0.25
SPTLC2-205ENST00000556607 IGKV5-2P06315 115 aa13.52□□□□□ -0.25
SPTLC2-205ENST00000556607 VEGFBP49765 207 aa13.52□□□□□ -0.25
SPTLC2-205ENST00000556607 EXOSC9Q06265 439 aaKnown RBP13.52□□□□□ -0.25
SPTLC2-205ENST00000556607 FLIIQ13045 1269 aa13.52□□□□□ -0.25
SPTLC2-205ENST00000556607 GRM1Q13255 1194 aa13.52□□□□□ -0.25
SPTLC2-205ENST00000556607 COL13A1Q5TAT6 717 aaPredicted RBP13.52□□□□□ -0.25
SPTLC2-205ENST00000556607 ZNF408Q9H9D4 720 aa13.52□□□□□ -0.25
SPTLC2-205ENST00000556607 CDHR2Q9BYE9 1310 aa13.52□□□□□ -0.25
SPTLC2-205ENST00000556607 NEURL1BA8MQ27 555 aa13.51□□□□□ -0.25
SPTLC2-205ENST00000556607 TRAF5O00463 557 aa13.51□□□□□ -0.25
SPTLC2-205ENST00000556607 CTSWP56202 376 aa13.51□□□□□ -0.25
SPTLC2-205ENST00000556607 NCBP3Q53F19 620 aaKnown RBP13.51□□□□□ -0.25
SPTLC2-205ENST00000556607 RBM26Q5T8P6 1007 aaKnown RBP13.51□□□□□ -0.25
SPTLC2-205ENST00000556607 UBE3BQ7Z3V4 1068 aa13.51□□□□□ -0.25
SPTLC2-205ENST00000556607 MICALL2Q8IY33 904 aa13.51□□□□□ -0.25
SPTLC2-205ENST00000556607 CDC5LQ99459 802 aaKnown RBP13.51□□□□□ -0.25
SPTLC2-205ENST00000556607 SHTN1A0MZ66 631 aa13.5□□□□□ -0.25
SPTLC2-205ENST00000556607 AIDAQ96BJ3 306 aa13.5□□□□□ -0.25
SPTLC2-205ENST00000556607 MYH16Q9H6N6 1097 aa13.5□□□□□ -0.25
SPTLC2-205ENST00000556607 KCNQ5Q9NR82 932 aa13.5□□□□□ -0.25
SPTLC2-205ENST00000556607 PODXL2Q9NZ53 605 aa13.5□□□□□ -0.25
SPTLC2-205ENST00000556607 VAMP4O75379 141 aa13.49□□□□□ -0.25
SPTLC2-205ENST00000556607 SAMD7Q7Z3H4 446 aa13.49□□□□□ -0.25
SPTLC2-205ENST00000556607 TNS4Q8IZW8 715 aa13.49□□□□□ -0.25
SPTLC2-205ENST00000556607 TTLL11Q8NHH1 800 aa13.49□□□□□ -0.25
SPTLC2-205ENST00000556607 TRPM4Q8TD43 1214 aa13.49□□□□□ -0.25
SPTLC2-205ENST00000556607 DNAAF4Q8WXU2 420 aa13.49□□□□□ -0.25
SPTLC2-205ENST00000556607 GLIS2Q9BZE0 524 aaPredicted RBP13.49□□□□□ -0.25
SPTLC2-205ENST00000556607 GREM2Q9H772 168 aa13.49□□□□□ -0.25
SPTLC2-205ENST00000556607 XDHP47989 1333 aa13.48□□□□□ -0.25
SPTLC2-205ENST00000556607 WDR33Q9C0J8 1336 aaKnown RBP13.48□□□□□ -0.25
SPTLC2-205ENST00000556607 RASSF10A6NK89 507 aa13.48□□□□□ -0.25
SPTLC2-205ENST00000556607 CELF2O95319 508 aaKnown RBP13.48□□□□□ -0.25
SPTLC2-205ENST00000556607 ATP2B4P23634 1241 aa13.48□□□□□ -0.25
SPTLC2-205ENST00000556607 IGHMBP2P38935 993 aaKnown RBP13.48□□□□□ -0.25
SPTLC2-205ENST00000556607 HIRAP54198 1017 aaPredicted RBP13.48□□□□□ -0.25
SPTLC2-205ENST00000556607 GCKRQ14397 625 aa13.48□□□□□ -0.25
SPTLC2-205ENST00000556607 TBC1D10BQ4KMP7 808 aaPredicted RBP13.48□□□□□ -0.25
SPTLC2-205ENST00000556607 CDC37L1Q7L3B6 337 aa13.48□□□□□ -0.25
SPTLC2-205ENST00000556607 DPF2Q92785 391 aa13.48□□□□□ -0.25
SPTLC2-205ENST00000556607 H7C1W4 665 aa13.47□□□□□ -0.25
SPTLC2-205ENST00000556607 CAPN15O75808 1086 aa13.47□□□□□ -0.25
SPTLC2-205ENST00000556607 RPS12P25398 132 aaKnown RBP13.47□□□□□ -0.25
SPTLC2-205ENST00000556607 ECE1P42892 770 aa13.47□□□□□ -0.25
SPTLC2-205ENST00000556607 CST9Q5W186 159 aa13.47□□□□□ -0.25
SPTLC2-205ENST00000556607 ZC3H15Q8WU90 426 aaKnown RBP13.47□□□□□ -0.25
SPTLC2-205ENST00000556607 FBXW7Q969H0 707 aa13.47□□□□□ -0.25
SPTLC2-205ENST00000556607 MPHOSPH8Q99549 860 aa13.47□□□□□ -0.25
SPTLC2-205ENST00000556607 CHMP3Q9Y3E7 222 aa13.47□□□□□ -0.25
SPTLC2-205ENST00000556607 POLR2AP24928 1970 aaKnown RBP13.47□□□□□ -0.25
SPTLC2-205ENST00000556607 SCN9AQ15858 1988 aa13.46□□□□□ -0.25
SPTLC2-205ENST00000556607 F6X3S4 739 aa13.46□□□□□ -0.25
SPTLC2-205ENST00000556607 FOXN1O15353 648 aa13.46□□□□□ -0.25
SPTLC2-205ENST00000556607 CYP4F22Q6NT55 531 aa13.46□□□□□ -0.25
SPTLC2-205ENST00000556607 USP48Q86UV5 1035 aa13.46□□□□□ -0.25
SPTLC2-205ENST00000556607 LINS1Q8NG48 757 aa13.46□□□□□ -0.25
SPTLC2-205ENST00000556607 DCPSQ96C86 337 aaKnown RBP13.46□□□□□ -0.25
SPTLC2-205ENST00000556607 SPINK5Q9NQ38 1064 aaPredicted RBP13.46□□□□□ -0.25
SPTLC2-205ENST00000556607 BSDC1Q9NW68 430 aaPredicted RBP13.46□□□□□ -0.25
SPTLC2-205ENST00000556607 MINPP1Q9UNW1 487 aa13.46□□□□□ -0.25
SPTLC2-205ENST00000556607 RTL9Q8NET4 1388 aa13.45□□□□□ -0.26
SPTLC2-205ENST00000556607 ITGA6P23229 1130 aa13.45□□□□□ -0.26
SPTLC2-205ENST00000556607 KIF4BQ2VIQ3 1234 aa13.45□□□□□ -0.26
SPTLC2-205ENST00000556607 SLC4A10Q6U841 1118 aa13.45□□□□□ -0.26
SPTLC2-205ENST00000556607 CAPNS2Q96L46 248 aa13.45□□□□□ -0.26
SPTLC2-205ENST00000556607 BEGAINQ9BUH8 593 aa13.45□□□□□ -0.26
SPTLC2-205ENST00000556607 PGAP2Q9UHJ9 254 aa13.45□□□□□ -0.26
SPTLC2-205ENST00000556607 TLL2Q9Y6L7 1015 aa13.45□□□□□ -0.26
SPTLC2-205ENST00000556607 PSME4Q14997 1843 aa13.44□□□□□ -0.26
SPTLC2-205ENST00000556607 EGFRP00533 1210 aa13.44□□□□□ -0.26
SPTLC2-205ENST00000556607 VIL1P09327 827 aaKnown RBP13.44□□□□□ -0.26
SPTLC2-205ENST00000556607 KCNJ4P48050 445 aa13.44□□□□□ -0.26
SPTLC2-205ENST00000556607 CCT4P50991 539 aaKnown RBP13.44□□□□□ -0.26
SPTLC2-205ENST00000556607 MAP2K1Q02750 393 aaPredicted RBP13.44□□□□□ -0.26
SPTLC2-205ENST00000556607 FAM161AQ3B820 660 aa13.44□□□□□ -0.26
SPTLC2-205ENST00000556607 ANKRD18BA2A2Z9 1011 aa13.43□□□□□ -0.26
SPTLC2-205ENST00000556607 USP17L3A6NCW0 530 aa13.43□□□□□ -0.26
SPTLC2-205ENST00000556607 USP17L4A6NCW7 530 aa13.43□□□□□ -0.26
SPTLC2-205ENST00000556607 CTCFP49711 727 aaPredicted RBP13.43□□□□□ -0.26
SPTLC2-205ENST00000556607 RSBN1LQ6PCB5 846 aaPredicted RBP13.43□□□□□ -0.26
SPTLC2-205ENST00000556607 USP17L1Q7RTZ2 530 aa13.43□□□□□ -0.26
SPTLC2-205ENST00000556607 KRT26Q7Z3Y9 468 aa13.43□□□□□ -0.26
SPTLC2-205ENST00000556607 PODNQ7Z5L7 613 aa13.43□□□□□ -0.26
SPTLC2-205ENST00000556607 WTIPA6NIX2 430 aaPredicted RBP13.42□□□□□ -0.26
SPTLC2-205ENST00000556607 TAF7LQ5H9L4 462 aa13.42□□□□□ -0.26
SPTLC2-205ENST00000556607 DLK2Q6UY11 383 aa13.42□□□□□ -0.26
SPTLC2-205ENST00000556607 SAPCD2Q86UD0 394 aa13.42□□□□□ -0.26
SPTLC2-205ENST00000556607 AGBL3Q8NEM8 1001 aa13.42□□□□□ -0.26
SPTLC2-205ENST00000556607 PLA2G12BQ9BX93 195 aa13.42□□□□□ -0.26
SPTLC2-205ENST00000556607 ANKRD2Q9GZV1 360 aa13.42□□□□□ -0.26
SPTLC2-205ENST00000556607 WBP1LQ9NX94 342 aa13.42□□□□□ -0.26
SPTLC2-205ENST00000556607 C9orf78Q9NZ63 289 aaPredicted RBP13.42□□□□□ -0.26
SPTLC2-205ENST00000556607 LEMD3Q9Y2U8 911 aa13.42□□□□□ -0.26
SPTLC2-205ENST00000556607 MED23Q9ULK4 1368 aa13.42□□□□□ -0.26
SPTLC2-205ENST00000556607 PCNTO95613 3336 aa13.42□□□□□ -0.26
SPTLC2-205ENST00000556607 ADM5C9JUS6 153 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms