RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 SPATA31C1P0DKV0 1188 aa7.85□□□□□ -1.15
SRP54-211ENST00000556445 ARID4AP29374 1257 aaPredicted RBP7.85□□□□□ -1.15
SRP54-211ENST00000556445 EIF1AXP47813 144 aaKnown RBP7.85□□□□□ -1.15
SRP54-211ENST00000556445 NOM1Q5C9Z4 860 aaKnown RBP7.85□□□□□ -1.15
SRP54-211ENST00000556445 HFE2Q6ZVN8 426 aa7.85□□□□□ -1.15
SRP54-211ENST00000556445 NUDT16Q96DE0 195 aaKnown RBP7.85□□□□□ -1.15
SRP54-211ENST00000556445 SPOCK3Q9BQ16 436 aa7.85□□□□□ -1.15
SRP54-211ENST00000556445 FNDC3AQ9Y2H6 1198 aaKnown RBP7.85□□□□□ -1.15
SRP54-211ENST00000556445 SPDYE3A6NKU9 549 aa7.84□□□□□ -1.15
SRP54-211ENST00000556445 FAM229AH3BQW9 127 aa7.84□□□□□ -1.15
SRP54-211ENST00000556445 EIF5BO60841 1220 aaKnown RBP7.84□□□□□ -1.15
SRP54-211ENST00000556445 CD163Q86VB7 1156 aa7.84□□□□□ -1.15
SRP54-211ENST00000556445 OR13H1Q8NG92 308 aa7.84□□□□□ -1.15
SRP54-211ENST00000556445 EDEM1Q92611 657 aa7.84□□□□□ -1.15
SRP54-211ENST00000556445 TTC9Q92623 222 aa7.84□□□□□ -1.15
SRP54-211ENST00000556445 NSUN5Q96P11 429 aaKnown RBP7.84□□□□□ -1.15
SRP54-211ENST00000556445 MTMR7Q9Y216 660 aa7.84□□□□□ -1.15
SRP54-211ENST00000556445 LOC102724428A0A0B4J2F2 783 aa7.83□□□□□ -1.16
SRP54-211ENST00000556445 C1QTNF9BB2RNN3 333 aa7.83□□□□□ -1.16
SRP54-211ENST00000556445 J3QW42 95 aa7.83□□□□□ -1.16
SRP54-211ENST00000556445 MSTNO14793 375 aa7.83□□□□□ -1.16
SRP54-211ENST00000556445 PDGFAP04085 211 aa7.83□□□□□ -1.16
SRP54-211ENST00000556445 CHRNA4P43681 627 aa7.83□□□□□ -1.16
SRP54-211ENST00000556445 SIK1P57059 783 aa7.83□□□□□ -1.16
SRP54-211ENST00000556445 ELMSAN1Q6PJG2 1045 aa7.83□□□□□ -1.16
SRP54-211ENST00000556445 EEA1Q15075 1411 aa7.83□□□□□ -1.16
SRP54-211ENST00000556445 EIF2AK2P19525 551 aaKnown RBP7.82□□□□□ -1.16
SRP54-211ENST00000556445 DNM1Q05193 864 aaKnown RBP7.82□□□□□ -1.16
SRP54-211ENST00000556445 ZNF211Q13398 564 aaPredicted RBP7.82□□□□□ -1.16
SRP54-211ENST00000556445 SF3B2Q13435 895 aaKnown RBP7.82□□□□□ -1.16
SRP54-211ENST00000556445 PRRT3Q5FWE3 981 aa7.82□□□□□ -1.16
SRP54-211ENST00000556445 COL13A1Q5TAT6 717 aaPredicted RBP7.82□□□□□ -1.16
SRP54-211ENST00000556445 PDE12Q6L8Q7 609 aaKnown RBP7.82□□□□□ -1.16
SRP54-211ENST00000556445 B4GALNT3Q6L9W6 998 aa7.82□□□□□ -1.16
SRP54-211ENST00000556445 SMG9Q9H0W8 520 aaKnown RBP7.82□□□□□ -1.16
SRP54-211ENST00000556445 GGNBP2Q9H3C7 697 aa7.82□□□□□ -1.16
SRP54-211ENST00000556445 WRNQ14191 1432 aaPredicted RBP eCLIP7.81□□□□□ -1.16
SRP54-211ENST00000556445 A0A0A0MRY4 1105 aa7.81□□□□□ -1.16
SRP54-211ENST00000556445 MZF1P28698 734 aaPredicted RBP7.81□□□□□ -1.16
SRP54-211ENST00000556445 FKBP4Q02790 459 aaKnown RBP eCLIP7.81□□□□□ -1.16
SRP54-211ENST00000556445 TRIM28Q13263 835 aaKnown RBP7.81□□□□□ -1.16
SRP54-211ENST00000556445 TRAPPC3LQ5T215 181 aa7.81□□□□□ -1.16
SRP54-211ENST00000556445 ALKBH2Q6NS38 261 aa7.81□□□□□ -1.16
SRP54-211ENST00000556445 XKR5Q6UX68 686 aa7.81□□□□□ -1.16
SRP54-211ENST00000556445 ELP3Q9H9T3 547 aa7.81□□□□□ -1.16
SRP54-211ENST00000556445 ANO2Q9NQ90 1003 aa7.81□□□□□ -1.16
SRP54-211ENST00000556445 ABI2Q9NYB9 513 aaPredicted RBP7.81□□□□□ -1.16
SRP54-211ENST00000556445 TMEM63CQ9P1W3 806 aa7.81□□□□□ -1.16
SRP54-211ENST00000556445 CC2D2AQ9P2K1 1620 aa7.81□□□□□ -1.16
SRP54-211ENST00000556445 FZD6O60353 706 aa7.8□□□□□ -1.16
SRP54-211ENST00000556445 FAM13AO94988 1023 aa7.8□□□□□ -1.16
SRP54-211ENST00000556445 ABL1P00519 1130 aa7.8□□□□□ -1.16
SRP54-211ENST00000556445 CYP2E1P05181 493 aaPredicted RBP7.8□□□□□ -1.16
SRP54-211ENST00000556445 RPLP1P05386 114 aaKnown RBP7.8□□□□□ -1.16
SRP54-211ENST00000556445 TTC39BQ5VTQ0 682 aaPredicted RBP7.8□□□□□ -1.16
SRP54-211ENST00000556445 MSL1Q68DK7 614 aa7.8□□□□□ -1.16
SRP54-211ENST00000556445 PLD4Q96BZ4 506 aa7.8□□□□□ -1.16
SRP54-211ENST00000556445 EGFL7Q9UHF1 273 aa7.8□□□□□ -1.16
SRP54-211ENST00000556445 POLIQ9UNA4 740 aa7.8□□□□□ -1.16
SRP54-211ENST00000556445 ABCC8Q09428 1581 aa7.8□□□□□ -1.16
SRP54-211ENST00000556445 A6NHS1 94 aa7.79□□□□□ -1.16
SRP54-211ENST00000556445 SERPINB4P48594 390 aa7.79□□□□□ -1.16
SRP54-211ENST00000556445 DMRTC2Q8IXT2 367 aaPredicted RBP7.79□□□□□ -1.16
SRP54-211ENST00000556445 CNTN3Q9P232 1028 aa7.79□□□□□ -1.16
SRP54-211ENST00000556445 ICMTO60725 284 aa7.78□□□□□ -1.16
SRP54-211ENST00000556445 KIF4AO95239 1232 aa7.78□□□□□ -1.16
SRP54-211ENST00000556445 GHRHP01286 108 aa7.78□□□□□ -1.16
SRP54-211ENST00000556445 PCSK2P16519 638 aa7.78□□□□□ -1.16
SRP54-211ENST00000556445 BAG6P46379 1132 aa7.78□□□□□ -1.16
SRP54-211ENST00000556445 HYAL2Q12891 473 aa7.78□□□□□ -1.16
SRP54-211ENST00000556445 GRIK4Q16099 956 aa7.78□□□□□ -1.16
SRP54-211ENST00000556445 ECM1Q16610 540 aa7.78□□□□□ -1.16
SRP54-211ENST00000556445 ZNF438Q7Z4V0 828 aa7.78□□□□□ -1.16
SRP54-211ENST00000556445 TXNDC2Q86VQ3 553 aa7.78□□□□□ -1.16
SRP54-211ENST00000556445 RGS22Q8NE09 1264 aa7.78□□□□□ -1.16
SRP54-211ENST00000556445 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.78□□□□□ -1.16
SRP54-211ENST00000556445 CFTRP13569 1480 aa7.78□□□□□ -1.16
SRP54-211ENST00000556445 PRDM2Q13029 1718 aa7.78□□□□□ -1.16
SRP54-211ENST00000556445 ELNP15502 786 aa7.77□□□□□ -1.17
SRP54-211ENST00000556445 RAC1P63000 192 aa7.77□□□□□ -1.17
SRP54-211ENST00000556445 WFDC8Q8IUA0 241 aa7.77□□□□□ -1.17
SRP54-211ENST00000556445 FMR1NBQ8N0W7 255 aaPredicted RBP7.77□□□□□ -1.17
SRP54-211ENST00000556445 CCDC87Q9NVE4 849 aa7.77□□□□□ -1.17
SRP54-211ENST00000556445 APBA3O96018 575 aa7.76□□□□□ -1.17
SRP54-211ENST00000556445 SELPP16109 830 aa7.76□□□□□ -1.17
SRP54-211ENST00000556445 ATP11AP98196 1134 aa7.76□□□□□ -1.17
SRP54-211ENST00000556445 PDE4CQ08493 712 aa7.76□□□□□ -1.17
SRP54-211ENST00000556445 C8orf34Q49A92 452 aa7.76□□□□□ -1.17
SRP54-211ENST00000556445 DTWD1Q8N5C7 304 aa7.76□□□□□ -1.17
SRP54-211ENST00000556445 C1orf127Q8N9H9 656 aa7.76□□□□□ -1.17
SRP54-211ENST00000556445 TRAIPQ9BWF2 469 aa7.76□□□□□ -1.17
SRP54-211ENST00000556445 CHRDQ9H2X0 955 aa7.76□□□□□ -1.17
SRP54-211ENST00000556445 TRIM33Q9UPN9 1127 aa7.76□□□□□ -1.17
SRP54-211ENST00000556445 H3BRB1 525 aa7.75□□□□□ -1.17
SRP54-211ENST00000556445 HMGB1P09429 215 aaKnown RBP7.75□□□□□ -1.17
SRP54-211ENST00000556445 AAMPQ13685 434 aa7.75□□□□□ -1.17
SRP54-211ENST00000556445 GJD3Q8N144 294 aa7.75□□□□□ -1.17
SRP54-211ENST00000556445 CEP120Q8N960 986 aa7.75□□□□□ -1.17
SRP54-211ENST00000556445 RBSNQ9H1K0 784 aa7.75□□□□□ -1.17
SRP54-211ENST00000556445 TUT1Q9H6E5 874 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms