RNA–Protein interactions for RNA: ENST00000556305.1

CDKN3-210, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 3

Gene CDKN3, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-210ENST00000556305 MRPL58Q14197 206 aaKnown RBP6.95□□□□□ -1.3
CDKN3-210ENST00000556305 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.95□□□□□ -1.3
CDKN3-210ENST00000556305 VWA5B2Q8N398 1253 aa6.95□□□□□ -1.3
CDKN3-210ENST00000556305 C1orf127Q8N9H9 656 aa6.95□□□□□ -1.3
CDKN3-210ENST00000556305 NANOS1Q8WY41 292 aaKnown RBP6.95□□□□□ -1.3
CDKN3-210ENST00000556305 RBSNQ9H1K0 784 aa6.95□□□□□ -1.3
CDKN3-210ENST00000556305 NPHS2Q9NP85 383 aa6.95□□□□□ -1.3
CDKN3-210ENST00000556305 STRN4Q9NRL3 753 aa6.95□□□□□ -1.3
CDKN3-210ENST00000556305 TLR7Q9NYK1 1049 aaKnown RBP6.95□□□□□ -1.3
CDKN3-210ENST00000556305 TRAK1Q9UPV9 953 aa6.95□□□□□ -1.3
CDKN3-210ENST00000556305 AK5Q9Y6K8 562 aa6.95□□□□□ -1.3
CDKN3-210ENST00000556305 SCAMP3O14828 347 aaKnown RBP6.94□□□□□ -1.3
CDKN3-210ENST00000556305 EREGO14944 169 aa6.94□□□□□ -1.3
CDKN3-210ENST00000556305 MMP20O60882 483 aa6.94□□□□□ -1.3
CDKN3-210ENST00000556305 BMP4P12644 408 aa6.94□□□□□ -1.3
CDKN3-210ENST00000556305 ZNF385CQ66K41 422 aaPredicted RBP6.94□□□□□ -1.3
CDKN3-210ENST00000556305 NCAPG2Q86XI2 1143 aa6.94□□□□□ -1.3
CDKN3-210ENST00000556305 CRELD1Q96HD1 420 aa6.94□□□□□ -1.3
CDKN3-210ENST00000556305 SETDB2Q96T68 719 aa6.94□□□□□ -1.3
CDKN3-210ENST00000556305 CNTN3Q9P232 1028 aa6.94□□□□□ -1.3
CDKN3-210ENST00000556305 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.93□□□□□ -1.3
CDKN3-210ENST00000556305 RECKO95980 971 aa6.93□□□□□ -1.3
CDKN3-210ENST00000556305 NRLP54845 237 aa6.93□□□□□ -1.3
CDKN3-210ENST00000556305 USPL1Q5W0Q7 1092 aa6.93□□□□□ -1.3
CDKN3-210ENST00000556305 KANK3Q6NY19 840 aa6.93□□□□□ -1.3
CDKN3-210ENST00000556305 DHX32Q7L7V1 743 aaKnown RBP6.93□□□□□ -1.3
CDKN3-210ENST00000556305 GPR161Q8N6U8 529 aaKnown RBP6.93□□□□□ -1.3
CDKN3-210ENST00000556305 TMEM87AQ8NBN3 555 aa6.93□□□□□ -1.3
CDKN3-210ENST00000556305 FAM161BQ96MY7 647 aa6.93□□□□□ -1.3
CDKN3-210ENST00000556305 CHRDQ9H2X0 955 aa6.93□□□□□ -1.3
CDKN3-210ENST00000556305 C12orf49Q9H741 205 aa6.93□□□□□ -1.3
CDKN3-210ENST00000556305 AVENQ9NQS1 362 aaPredicted RBP6.93□□□□□ -1.3
CDKN3-210ENST00000556305 FAM8A1Q9UBU6 413 aa6.93□□□□□ -1.3
CDKN3-210ENST00000556305 GPR25O00155 361 aa6.92□□□□□ -1.3
CDKN3-210ENST00000556305 ADAM23O75077 832 aa6.92□□□□□ -1.3
CDKN3-210ENST00000556305 POLR3DP05423 398 aaPredicted RBP6.92□□□□□ -1.3
CDKN3-210ENST00000556305 HOXD8P13378 290 aaPredicted RBP6.92□□□□□ -1.3
CDKN3-210ENST00000556305 MX2P20592 715 aa6.92□□□□□ -1.3
CDKN3-210ENST00000556305 EPS8L3Q8TE67 593 aaKnown RBP6.92□□□□□ -1.3
CDKN3-210ENST00000556305 CNTNAP3BQ96NU0 1288 aa6.92□□□□□ -1.3
CDKN3-210ENST00000556305 SLC30A3Q99726 388 aa6.92□□□□□ -1.3
CDKN3-210ENST00000556305 KRTAP9-2Q9BYQ4 174 aa6.92□□□□□ -1.3
CDKN3-210ENST00000556305 CNTNAP3Q9BZ76 1288 aa6.92□□□□□ -1.3
CDKN3-210ENST00000556305 EHD4Q9H223 541 aa6.92□□□□□ -1.3
CDKN3-210ENST00000556305 SUV39H2Q9H5I1 410 aa6.92□□□□□ -1.3
CDKN3-210ENST00000556305 METTL5Q9NRN9 209 aaKnown RBP6.92□□□□□ -1.3
CDKN3-210ENST00000556305 KANSL3Q9P2N6 904 aa6.92□□□□□ -1.3
CDKN3-210ENST00000556305 GSTT1P30711 240 aa6.91□□□□□ -1.3
CDKN3-210ENST00000556305 IRS1P35568 1242 aa6.91□□□□□ -1.3
CDKN3-210ENST00000556305 MAP2K3P46734 347 aa6.91□□□□□ -1.3
CDKN3-210ENST00000556305 ZNF468Q5VIY5 522 aaPredicted RBP6.91□□□□□ -1.3
CDKN3-210ENST00000556305 RAB44Q7Z6P3 723 aaPredicted RBP6.91□□□□□ -1.3
CDKN3-210ENST00000556305 BACH2Q9BYV9 841 aa6.91□□□□□ -1.3
CDKN3-210ENST00000556305 UBE2OQ9C0C9 1292 aaKnown RBP6.91□□□□□ -1.3
CDKN3-210ENST00000556305 ZFATQ9P243 1243 aa6.91□□□□□ -1.3
CDKN3-210ENST00000556305 SIN3BO75182 1162 aa6.9□□□□□ -1.3
CDKN3-210ENST00000556305 ARHGEF15O94989 841 aa6.9□□□□□ -1.3
CDKN3-210ENST00000556305 GHRHP01286 108 aa6.9□□□□□ -1.3
CDKN3-210ENST00000556305 CYP2E1P05181 493 aaPredicted RBP6.9□□□□□ -1.3
CDKN3-210ENST00000556305 XRCC5P13010 732 aaKnown RBP6.9□□□□□ -1.3
CDKN3-210ENST00000556305 GPLD1P80108 840 aa6.9□□□□□ -1.3
CDKN3-210ENST00000556305 TBC1D8BQ0IIM8 1120 aa6.9□□□□□ -1.3
CDKN3-210ENST00000556305 KIAA0319Q5VV43 1072 aa6.9□□□□□ -1.3
CDKN3-210ENST00000556305 SYT9Q86SS6 491 aa6.9□□□□□ -1.3
CDKN3-210ENST00000556305 BCO2Q9BYV7 579 aa6.9□□□□□ -1.3
CDKN3-210ENST00000556305 ZFYVE1Q9HBF4 777 aa6.9□□□□□ -1.3
CDKN3-210ENST00000556305 SALL4Q9UJQ4 1053 aa6.9□□□□□ -1.3
CDKN3-210ENST00000556305 FAM177BA6PVY3 158 aa6.89□□□□□ -1.31
CDKN3-210ENST00000556305 KIF4AO95239 1232 aa6.89□□□□□ -1.31
CDKN3-210ENST00000556305 SLURP2P0DP57 97 aa6.89□□□□□ -1.31
CDKN3-210ENST00000556305 ADH6P28332 368 aa6.89□□□□□ -1.31
CDKN3-210ENST00000556305 CTBSQ01459 385 aa6.89□□□□□ -1.31
CDKN3-210ENST00000556305 SVOPQ8N4V2 548 aa6.89□□□□□ -1.31
CDKN3-210ENST00000556305 TRPM4Q8TD43 1214 aa6.89□□□□□ -1.31
CDKN3-210ENST00000556305 NSUN5Q96P11 429 aaKnown RBP6.89□□□□□ -1.31
CDKN3-210ENST00000556305 IGFLR1Q9H665 355 aa6.89□□□□□ -1.31
CDKN3-210ENST00000556305 LIN7BQ9HAP6 207 aa6.89□□□□□ -1.31
CDKN3-210ENST00000556305 MBIPQ9NS73 344 aa6.89□□□□□ -1.31
CDKN3-210ENST00000556305 A0A1W2PP55 124 aa6.88□□□□□ -1.31
CDKN3-210ENST00000556305 USP17L7P0C7H9 530 aa6.88□□□□□ -1.31
CDKN3-210ENST00000556305 ARAFP10398 606 aa6.88□□□□□ -1.31
CDKN3-210ENST00000556305 ZNF76P36508 570 aa6.88□□□□□ -1.31
CDKN3-210ENST00000556305 GRM2Q14416 872 aa6.88□□□□□ -1.31
CDKN3-210ENST00000556305 GRIN2CQ14957 1233 aa6.88□□□□□ -1.31
CDKN3-210ENST00000556305 NXPE4Q6UWF7 544 aa6.88□□□□□ -1.31
CDKN3-210ENST00000556305 PI16Q6UXB8 463 aa6.88□□□□□ -1.31
CDKN3-210ENST00000556305 MICALL1Q8N3F8 863 aa6.88□□□□□ -1.31
CDKN3-210ENST00000556305 RNF34Q969K3 372 aa6.88□□□□□ -1.31
CDKN3-210ENST00000556305 IGSF5Q9NSI5 407 aa6.88□□□□□ -1.31
CDKN3-210ENST00000556305 LOC102724428A0A0B4J2F2 783 aa6.87□□□□□ -1.31
CDKN3-210ENST00000556305 KRTAP9-6A0A140TA67 174 aa6.87□□□□□ -1.31
CDKN3-210ENST00000556305 SMNDC1O75940 238 aaKnown RBP eCLIP6.87□□□□□ -1.31
CDKN3-210ENST00000556305 EIF2AK2P19525 551 aaKnown RBP6.87□□□□□ -1.31
CDKN3-210ENST00000556305 SIK1P57059 783 aa6.87□□□□□ -1.31
CDKN3-210ENST00000556305 PRPF40BQ6NWY9 871 aaKnown RBP6.87□□□□□ -1.31
CDKN3-210ENST00000556305 TNFRSF25Q93038 417 aa6.87□□□□□ -1.31
CDKN3-210ENST00000556305 OSMRQ99650 979 aa6.87□□□□□ -1.31
CDKN3-210ENST00000556305 COL25A1Q9BXS0 654 aaPredicted RBP6.87□□□□□ -1.31
CDKN3-210ENST00000556305 OSBPL7Q9BZF2 842 aa6.87□□□□□ -1.31
CDKN3-210ENST00000556305 RNF19AQ9NV58 838 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms