RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 DNMT3LQ9UJW3 386 aa12.77□□□□□ -0.37
GTF2A1-204ENST00000556268 KDF1Q8NAX2 398 aaPredicted RBP12.76□□□□□ -0.37
GTF2A1-204ENST00000556268 SCTRP47872 440 aa12.75□□□□□ -0.37
GTF2A1-204ENST00000556268 ERVK-9P63128 1117 aa12.75□□□□□ -0.37
GTF2A1-204ENST00000556268 NFX1Q12986 1120 aaKnown RBP12.75□□□□□ -0.37
GTF2A1-204ENST00000556268 SLC15A2Q16348 729 aa12.75□□□□□ -0.37
GTF2A1-204ENST00000556268 USP31Q70CQ4 1352 aa12.75□□□□□ -0.37
GTF2A1-204ENST00000556268 SBF2Q86WG5 1849 aa12.75□□□□□ -0.37
GTF2A1-204ENST00000556268 ZNF395Q9H8N7 513 aaPredicted RBP12.75□□□□□ -0.37
GTF2A1-204ENST00000556268 CCDC7Q96M83 1385 aa12.74□□□□□ -0.37
GTF2A1-204ENST00000556268 TTLL8A6PVC2 850 aa12.74□□□□□ -0.37
GTF2A1-204ENST00000556268 TERTO14746 1132 aaKnown RBP12.74□□□□□ -0.37
GTF2A1-204ENST00000556268 CSB-PGBD3P0DP91 1061 aa12.74□□□□□ -0.37
GTF2A1-204ENST00000556268 CC2D2BQ6DHV5 1058 aa12.74□□□□□ -0.37
GTF2A1-204ENST00000556268 TREML4Q6UXN2 200 aa12.74□□□□□ -0.37
GTF2A1-204ENST00000556268 CCDC85AQ96PX6 553 aaPredicted RBP12.74□□□□□ -0.37
GTF2A1-204ENST00000556268 INSM2Q96T92 566 aaPredicted RBP12.74□□□□□ -0.37
GTF2A1-204ENST00000556268 PIK3C2AO00443 1686 aa12.73□□□□□ -0.37
GTF2A1-204ENST00000556268 KTN1Q86UP2 1357 aaKnown RBP12.73□□□□□ -0.37
GTF2A1-204ENST00000556268 RAD21O60216 631 aa12.73□□□□□ -0.37
GTF2A1-204ENST00000556268 ZBTB7AO95365 584 aa12.73□□□□□ -0.37
GTF2A1-204ENST00000556268 NXF1Q9UBU9 619 aaKnown RBP12.73□□□□□ -0.37
GTF2A1-204ENST00000556268 QRICH2Q9H0J4 1663 aa12.73□□□□□ -0.37
GTF2A1-204ENST00000556268 ROCK2O75116 1388 aaKnown RBP12.72□□□□□ -0.37
GTF2A1-204ENST00000556268 RGPD3A6NKT7 1758 aaPredicted RBP12.72□□□□□ -0.37
GTF2A1-204ENST00000556268 RGPD4Q7Z3J3 1758 aa12.72□□□□□ -0.37
GTF2A1-204ENST00000556268 PTGIRP43119 386 aa12.72□□□□□ -0.37
GTF2A1-204ENST00000556268 CTSOP43234 321 aaPredicted RBP12.72□□□□□ -0.37
GTF2A1-204ENST00000556268 LCE2AQ5TA79 106 aaPredicted RBP12.72□□□□□ -0.37
GTF2A1-204ENST00000556268 PUS7Q96PZ0 661 aaKnown RBP12.72□□□□□ -0.37
GTF2A1-204ENST00000556268 STK32BQ9NY57 414 aa12.72□□□□□ -0.37
GTF2A1-204ENST00000556268 LRRC37A3O60309 1634 aa12.72□□□□□ -0.37
GTF2A1-204ENST00000556268 WFS1O76024 890 aa12.71□□□□□ -0.37
GTF2A1-204ENST00000556268 NEUROD1Q13562 356 aa12.71□□□□□ -0.37
GTF2A1-204ENST00000556268 SYT17Q9BSW7 474 aa12.71□□□□□ -0.37
GTF2A1-204ENST00000556268 POLMQ9NP87 494 aaPredicted RBP12.71□□□□□ -0.37
GTF2A1-204ENST00000556268 NFAT5O94916 1531 aa12.71□□□□□ -0.38
GTF2A1-204ENST00000556268 SBNO2Q9Y2G9 1366 aa12.7□□□□□ -0.38
GTF2A1-204ENST00000556268 FIGNL2A6NMB9 653 aa12.7□□□□□ -0.38
GTF2A1-204ENST00000556268 ATP5J2-PTCD1G3V325 749 aa12.7□□□□□ -0.38
GTF2A1-204ENST00000556268 VEGFBP49765 207 aa12.7□□□□□ -0.38
GTF2A1-204ENST00000556268 SLFNL1Q499Z3 407 aa12.7□□□□□ -0.38
GTF2A1-204ENST00000556268 PHTF2Q8N3S3 785 aa12.7□□□□□ -0.38
GTF2A1-204ENST00000556268 MTFR1LQ9H019 292 aa12.7□□□□□ -0.38
GTF2A1-204ENST00000556268 SLC12A5Q9H2X9 1139 aa12.7□□□□□ -0.38
GTF2A1-204ENST00000556268 TRPM1Q7Z4N2 1603 aa12.7□□□□□ -0.38
GTF2A1-204ENST00000556268 CASZ1Q86V15 1759 aa12.69□□□□□ -0.38
GTF2A1-204ENST00000556268 UTRNP46939 3433 aa12.69□□□□□ -0.38
GTF2A1-204ENST00000556268 IL2RBP14784 551 aa12.69□□□□□ -0.38
GTF2A1-204ENST00000556268 SOX11P35716 441 aa12.69□□□□□ -0.38
GTF2A1-204ENST00000556268 SEMA3FQ13275 785 aa12.69□□□□□ -0.38
GTF2A1-204ENST00000556268 NME9Q86XW9 330 aa12.69□□□□□ -0.38
GTF2A1-204ENST00000556268 RNF135Q8IUD6 432 aa12.69□□□□□ -0.38
GTF2A1-204ENST00000556268 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.69□□□□□ -0.38
GTF2A1-204ENST00000556268 WWC1Q8IX03 1113 aa12.69□□□□□ -0.38
GTF2A1-204ENST00000556268 NLRP2Q9NX02 1062 aa12.69□□□□□ -0.38
GTF2A1-204ENST00000556268 ABCC6O95255 1503 aa12.68□□□□□ -0.38
GTF2A1-204ENST00000556268 CD163L1Q9NR16 1453 aa12.68□□□□□ -0.38
GTF2A1-204ENST00000556268 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.68□□□□□ -0.38
GTF2A1-204ENST00000556268 LCE2CQ5TA81 110 aa12.68□□□□□ -0.38
GTF2A1-204ENST00000556268 FHDC1Q9C0D6 1143 aaPredicted RBP12.68□□□□□ -0.38
GTF2A1-204ENST00000556268 OSBPL3Q9H4L5 887 aa12.68□□□□□ -0.38
GTF2A1-204ENST00000556268 AKAP12Q02952 1782 aa12.67□□□□□ -0.38
GTF2A1-204ENST00000556268 RGPD5Q99666 1765 aa12.67□□□□□ -0.38
GTF2A1-204ENST00000556268 TSGA10IPQ3SY00 556 aa12.67□□□□□ -0.38
GTF2A1-204ENST00000556268 FOXD4L5Q5VV16 416 aaPredicted RBP12.67□□□□□ -0.38
GTF2A1-204ENST00000556268 CYP2U1Q7Z449 544 aa12.67□□□□□ -0.38
GTF2A1-204ENST00000556268 RNF217Q8TC41 542 aa12.67□□□□□ -0.38
GTF2A1-204ENST00000556268 ANKRD24Q8TF21 1146 aa12.67□□□□□ -0.38
GTF2A1-204ENST00000556268 IP6K1Q92551 441 aa12.67□□□□□ -0.38
GTF2A1-204ENST00000556268 ACSBG1Q96GR2 724 aa12.67□□□□□ -0.38
GTF2A1-204ENST00000556268 LRRC4BQ9NT99 713 aa12.67□□□□□ -0.38
GTF2A1-204ENST00000556268 DOLKQ9UPQ8 538 aa12.67□□□□□ -0.38
GTF2A1-204ENST00000556268 TNS2Q63HR2 1409 aa12.66□□□□□ -0.38
GTF2A1-204ENST00000556268 TRAK2O60296 914 aa12.66□□□□□ -0.38
GTF2A1-204ENST00000556268 H3BM21 787 aa12.65□□□□□ -0.38
GTF2A1-204ENST00000556268 HDGFL2Q7Z4V5 671 aaPredicted RBP12.65□□□□□ -0.38
GTF2A1-204ENST00000556268 NPAS3Q8IXF0 933 aa12.65□□□□□ -0.38
GTF2A1-204ENST00000556268 TMC1Q8TDI8 760 aa12.65□□□□□ -0.38
GTF2A1-204ENST00000556268 CLUAP1Q96AJ1 413 aa12.65□□□□□ -0.38
GTF2A1-204ENST00000556268 CARD11Q9BXL7 1154 aa12.65□□□□□ -0.38
GTF2A1-204ENST00000556268 TERF2IPQ9NYB0 399 aa12.65□□□□□ -0.38
GTF2A1-204ENST00000556268 POM121CA8CG34 1229 aa12.64□□□□□ -0.39
GTF2A1-204ENST00000556268 MYCP01106 439 aaPredicted RBP12.64□□□□□ -0.39
GTF2A1-204ENST00000556268 ARXQ96QS3 562 aa12.64□□□□□ -0.39
GTF2A1-204ENST00000556268 WNK3Q9BYP7 1800 aa12.63□□□□□ -0.39
GTF2A1-204ENST00000556268 A0A1W2PRU2 124 aa12.63□□□□□ -0.39
GTF2A1-204ENST00000556268 ZNF827Q17R98 1081 aa12.63□□□□□ -0.39
GTF2A1-204ENST00000556268 SLC27A3Q5K4L6 730 aa12.63□□□□□ -0.39
GTF2A1-204ENST00000556268 SLC16A10Q8TF71 515 aa12.63□□□□□ -0.39
GTF2A1-204ENST00000556268 MAP3K5Q99683 1374 aa12.63□□□□□ -0.39
GTF2A1-204ENST00000556268 EDC4Q6P2E9 1401 aaKnown RBP12.62□□□□□ -0.39
GTF2A1-204ENST00000556268 MEN1O00255 615 aa12.62□□□□□ -0.39
GTF2A1-204ENST00000556268 PIK3CDO00329 1044 aa12.62□□□□□ -0.39
GTF2A1-204ENST00000556268 PTSQ03393 145 aa12.62□□□□□ -0.39
GTF2A1-204ENST00000556268 OXLD1Q5BKU9 147 aa12.62□□□□□ -0.39
GTF2A1-204ENST00000556268 TESK2Q96S53 571 aa12.62□□□□□ -0.39
GTF2A1-204ENST00000556268 ALG2Q9H553 416 aa12.62□□□□□ -0.39
GTF2A1-204ENST00000556268 ARHGEF10LQ9HCE6 1279 aa12.62□□□□□ -0.39
GTF2A1-204ENST00000556268 DDX54Q8TDD1 881 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 189.4 ms