RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 USP48Q86UV5 1035 aa21.91■■□□□ 1.1
XRCC3-215ENST00000555964 CCDC191Q8NCU4 936 aa21.91■■□□□ 1.1
XRCC3-215ENST00000555964 TBC1D16Q8TBP0 767 aa21.91■■□□□ 1.1
XRCC3-215ENST00000555964 DCPSQ96C86 337 aaKnown RBP21.91■■□□□ 1.1
XRCC3-215ENST00000555964 PODXL2Q9NZ53 605 aa21.91■■□□□ 1.1
XRCC3-215ENST00000555964 PSME4Q14997 1843 aa21.9■■□□□ 1.1
XRCC3-215ENST00000555964 ZNF853P0CG23 659 aa21.9■■□□□ 1.1
XRCC3-215ENST00000555964 HUNKP57058 714 aa21.9■■□□□ 1.1
XRCC3-215ENST00000555964 SAMD7Q7Z3H4 446 aa21.9■■□□□ 1.1
XRCC3-215ENST00000555964 ANKIB1Q9P2G1 1089 aa21.9■■□□□ 1.1
XRCC3-215ENST00000555964 SCN9AQ15858 1988 aa21.9■■□□□ 1.1
XRCC3-215ENST00000555964 MYH3P11055 1940 aa21.89■■□□□ 1.09
XRCC3-215ENST00000555964 SHTN1A0MZ66 631 aa21.89■■□□□ 1.09
XRCC3-215ENST00000555964 TBC1D10BQ4KMP7 808 aaPredicted RBP21.89■■□□□ 1.09
XRCC3-215ENST00000555964 C2orf69Q8N8R5 385 aa21.89■■□□□ 1.09
XRCC3-215ENST00000555964 GGA1Q9UJY5 639 aa21.89■■□□□ 1.09
XRCC3-215ENST00000555964 UFL1O94874 794 aa21.88■■□□□ 1.09
XRCC3-215ENST00000555964 PCCAP05165 728 aaPredicted RBP21.88■■□□□ 1.09
XRCC3-215ENST00000555964 DOK7Q18PE1 504 aa21.88■■□□□ 1.09
XRCC3-215ENST00000555964 MYD88Q99836 296 aa21.88■■□□□ 1.09
XRCC3-215ENST00000555964 GBA2Q9HCG7 927 aaPredicted RBP21.88■■□□□ 1.09
XRCC3-215ENST00000555964 CWC25Q9NXE8 425 aaPredicted RBP21.88■■□□□ 1.09
XRCC3-215ENST00000555964 AKAP11Q9UKA4 1901 aa21.88■■□□□ 1.09
XRCC3-215ENST00000555964 ZNF609O15014 1411 aa21.88■■□□□ 1.09
XRCC3-215ENST00000555964 RTL9Q8NET4 1388 aa21.87■■□□□ 1.09
XRCC3-215ENST00000555964 PDE8AO60658 829 aa21.87■■□□□ 1.09
XRCC3-215ENST00000555964 KIF4BQ2VIQ3 1234 aa21.87■■□□□ 1.09
XRCC3-215ENST00000555964 CCDC30Q5VVM6 783 aa21.87■■□□□ 1.09
XRCC3-215ENST00000555964 SULF1Q8IWU6 871 aa21.87■■□□□ 1.09
XRCC3-215ENST00000555964 PRKRIP1Q9H875 184 aaPredicted RBP21.87■■□□□ 1.09
XRCC3-215ENST00000555964 TSKSQ9UJT2 592 aa21.87■■□□□ 1.09
XRCC3-215ENST00000555964 COL4A1P02462 1669 aa21.86■■□□□ 1.09
XRCC3-215ENST00000555964 CCDC85CA6NKD9 419 aa21.86■■□□□ 1.09
XRCC3-215ENST00000555964 APAF1O14727 1248 aa21.86■■□□□ 1.09
XRCC3-215ENST00000555964 VIL1P09327 827 aaKnown RBP21.86■■□□□ 1.09
XRCC3-215ENST00000555964 RGMBQ6NW40 437 aa21.86■■□□□ 1.09
XRCC3-215ENST00000555964 CCDC102AQ96A19 550 aa21.86■■□□□ 1.09
XRCC3-215ENST00000555964 RBM26Q5T8P6 1007 aaKnown RBP21.85■■□□□ 1.09
XRCC3-215ENST00000555964 PHAXQ9H814 394 aaKnown RBP21.85■■□□□ 1.09
XRCC3-215ENST00000555964 XDHP47989 1333 aa21.84■■□□□ 1.09
XRCC3-215ENST00000555964 ANKRD18AQ8IVF6 992 aa21.84■■□□□ 1.09
XRCC3-215ENST00000555964 AGBL3Q8NEM8 1001 aa21.84■■□□□ 1.09
XRCC3-215ENST00000555964 METTL22Q9BUU2 404 aaPredicted RBP21.84■■□□□ 1.09
XRCC3-215ENST00000555964 SEC31BQ9NQW1 1179 aa21.84■■□□□ 1.09
XRCC3-215ENST00000555964 ELL2O00472 640 aaPredicted RBP21.83■■□□□ 1.09
XRCC3-215ENST00000555964 CDC5LQ99459 802 aaKnown RBP21.83■■□□□ 1.09
XRCC3-215ENST00000555964 SAGE1Q9NXZ1 904 aa21.83■■□□□ 1.09
XRCC3-215ENST00000555964 GGA3Q9NZ52 723 aa21.83■■□□□ 1.09
XRCC3-215ENST00000555964 ADM5C9JUS6 153 aa21.82■■□□□ 1.08
XRCC3-215ENST00000555964 EGFRP00533 1210 aa21.82■■□□□ 1.08
XRCC3-215ENST00000555964 RSBN1LQ6PCB5 846 aaPredicted RBP21.82■■□□□ 1.08
XRCC3-215ENST00000555964 KCNQ5Q9NR82 932 aa21.82■■□□□ 1.08
XRCC3-215ENST00000555964 ATP2B4P23634 1241 aa21.81■■□□□ 1.08
XRCC3-215ENST00000555964 NEXNQ0ZGT2 675 aa21.81■■□□□ 1.08
XRCC3-215ENST00000555964 FAM161AQ3B820 660 aa21.81■■□□□ 1.08
XRCC3-215ENST00000555964 MCOLN1Q9GZU1 580 aa21.81■■□□□ 1.08
XRCC3-215ENST00000555964 ZNF157P51786 506 aaPredicted RBP21.8■■□□□ 1.08
XRCC3-215ENST00000555964 ZNF280AP59817 542 aaPredicted RBP21.8■■□□□ 1.08
XRCC3-215ENST00000555964 MLLT1Q03111 559 aaPredicted RBP21.8■■□□□ 1.08
XRCC3-215ENST00000555964 PODNQ7Z5L7 613 aa21.8■■□□□ 1.08
XRCC3-215ENST00000555964 STK31Q9BXU1 1019 aa21.8■■□□□ 1.08
XRCC3-215ENST00000555964 SPEF2Q9C093 1822 aa21.8■■□□□ 1.08
XRCC3-215ENST00000555964 CACNA1FO60840 1977 aa21.79■■□□□ 1.08
XRCC3-215ENST00000555964 CTSWP56202 376 aa21.79■■□□□ 1.08
XRCC3-215ENST00000555964 REM2Q8IYK8 340 aaPredicted RBP21.79■■□□□ 1.08
XRCC3-215ENST00000555964 MAP3K2Q9Y2U5 619 aa21.79■■□□□ 1.08
XRCC3-215ENST00000555964 PAPPA2Q9BXP8 1791 aa21.79■■□□□ 1.08
XRCC3-215ENST00000555964 PITPNM2Q9BZ72 1349 aa21.79■■□□□ 1.08
XRCC3-215ENST00000555964 USP17L8P0C7I0 530 aa21.78■■□□□ 1.08
XRCC3-215ENST00000555964 FKBP1BP68106 108 aa21.78■■□□□ 1.08
XRCC3-215ENST00000555964 DGKZQ13574 1117 aa21.78■■□□□ 1.08
XRCC3-215ENST00000555964 KSR2Q6VAB6 950 aa21.78■■□□□ 1.08
XRCC3-215ENST00000555964 C8orf58Q8NAV2 365 aa21.78■■□□□ 1.08
XRCC3-215ENST00000555964 CCDC85AQ96PX6 553 aaPredicted RBP21.78■■□□□ 1.08
XRCC3-215ENST00000555964 MED23Q9ULK4 1368 aa21.77■■□□□ 1.08
XRCC3-215ENST00000555964 USP17L3A6NCW0 530 aa21.77■■□□□ 1.08
XRCC3-215ENST00000555964 USP17L4A6NCW7 530 aa21.77■■□□□ 1.08
XRCC3-215ENST00000555964 FAM155AB1AL88 458 aaPredicted RBP21.77■■□□□ 1.08
XRCC3-215ENST00000555964 RGS19P49795 217 aa21.77■■□□□ 1.08
XRCC3-215ENST00000555964 USP17L1Q7RTZ2 530 aa21.77■■□□□ 1.08
XRCC3-215ENST00000555964 CDCA5Q96FF9 252 aa21.77■■□□□ 1.08
XRCC3-215ENST00000555964 SLC10A3P09131 477 aa21.76■■□□□ 1.07
XRCC3-215ENST00000555964 SCARF1Q14162 830 aa21.76■■□□□ 1.07
XRCC3-215ENST00000555964 ANGEL2Q5VTE6 544 aaKnown RBP21.76■■□□□ 1.07
XRCC3-215ENST00000555964 DLK2Q6UY11 383 aa21.76■■□□□ 1.07
XRCC3-215ENST00000555964 MYOZ2Q9NPC6 264 aa21.76■■□□□ 1.07
XRCC3-215ENST00000555964 KIF23Q02241 960 aaPredicted RBP21.75■■□□□ 1.07
XRCC3-215ENST00000555964 ZIC5Q96T25 663 aa21.75■■□□□ 1.07
XRCC3-215ENST00000555964 BSDC1Q9NW68 430 aaPredicted RBP21.75■■□□□ 1.07
XRCC3-215ENST00000555964 MYO3BQ8WXR4 1341 aa21.75■■□□□ 1.07
XRCC3-215ENST00000555964 PI4KAP2A4QPH2 592 aa21.74■■□□□ 1.07
XRCC3-215ENST00000555964 MMP14P50281 582 aa21.74■■□□□ 1.07
XRCC3-215ENST00000555964 OGFOD1Q8N543 542 aa21.74■■□□□ 1.07
XRCC3-215ENST00000555964 PI4KAP1Q8N8J0 262 aa21.74■■□□□ 1.07
XRCC3-215ENST00000555964 JARID2Q92833 1246 aaPredicted RBP21.74■■□□□ 1.07
XRCC3-215ENST00000555964 GMLQ99445 158 aa21.74■■□□□ 1.07
XRCC3-215ENST00000555964 TTLL11Q8NHH1 800 aa21.73■■□□□ 1.07
XRCC3-215ENST00000555964 IGHMBP2P38935 993 aaKnown RBP21.72■■□□□ 1.07
XRCC3-215ENST00000555964 CCDC27Q2M243 656 aa21.72■■□□□ 1.07
XRCC3-215ENST00000555964 ASTN2O75129 1339 aaPredicted RBP21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms