RNA–Protein interactions for RNA: ENST00000555961.1

NEK9-208, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-208ENST00000555961 SIK1P57059 783 aa3.41□□□□□ -1.86
NEK9-208ENST00000555961 CDCA8Q53HL2 280 aa3.41□□□□□ -1.86
NEK9-208ENST00000555961 GDF6Q6KF10 455 aaPredicted RBP3.41□□□□□ -1.86
NEK9-208ENST00000555961 PIK3R5Q8WYR1 880 aa3.41□□□□□ -1.86
NEK9-208ENST00000555961 SPACA7Q96KW9 195 aa3.41□□□□□ -1.86
NEK9-208ENST00000555961 NSUN5Q96P11 429 aaKnown RBP3.41□□□□□ -1.86
NEK9-208ENST00000555961 MRPL18Q9H0U6 180 aaKnown RBP3.41□□□□□ -1.86
NEK9-208ENST00000555961 MUC3BQ9H195 1237 aa3.41□□□□□ -1.86
NEK9-208ENST00000555961 ZFATQ9P243 1243 aa3.41□□□□□ -1.86
NEK9-208ENST00000555961 ZNF777Q9ULD5 760 aaPredicted RBP3.41□□□□□ -1.86
NEK9-208ENST00000555961 FNDC3AQ9Y2H6 1198 aaKnown RBP3.41□□□□□ -1.86
NEK9-208ENST00000555961 ACIN1Q9UKV3 1341 aaKnown RBP3.41□□□□□ -1.86
NEK9-208ENST00000555961 PRMT3O60678 531 aa3.4□□□□□ -1.87
NEK9-208ENST00000555961 PTCD1O75127 700 aaKnown RBP3.4□□□□□ -1.87
NEK9-208ENST00000555961 SOX18P35713 384 aa3.4□□□□□ -1.87
NEK9-208ENST00000555961 CFAP70Q5T0N1 1121 aa3.4□□□□□ -1.87
NEK9-208ENST00000555961 C16orf46Q6P387 395 aa3.4□□□□□ -1.87
NEK9-208ENST00000555961 NLRP13Q86W25 1043 aa3.4□□□□□ -1.87
NEK9-208ENST00000555961 IL22RA1Q8N6P7 574 aa3.4□□□□□ -1.87
NEK9-208ENST00000555961 PRIMPOLQ96LW4 560 aa3.4□□□□□ -1.87
NEK9-208ENST00000555961 AKTIPQ9H8T0 292 aa3.4□□□□□ -1.87
NEK9-208ENST00000555961 USP20Q9Y2K6 914 aa3.4□□□□□ -1.87
NEK9-208ENST00000555961 ZBTB42B2RXF5 422 aa3.39□□□□□ -1.87
NEK9-208ENST00000555961 UBAP1LF5GYI3 381 aa3.39□□□□□ -1.87
NEK9-208ENST00000555961 J3QW42 95 aa3.39□□□□□ -1.87
NEK9-208ENST00000555961 OPLAHO14841 1288 aa3.39□□□□□ -1.87
NEK9-208ENST00000555961 MMP20O60882 483 aa3.39□□□□□ -1.87
NEK9-208ENST00000555961 SMNDC1O75940 238 aaKnown RBP eCLIP3.39□□□□□ -1.87
NEK9-208ENST00000555961 GRNP28799 593 aaKnown RBP3.39□□□□□ -1.87
NEK9-208ENST00000555961 NOS3P29474 1203 aa3.39□□□□□ -1.87
NEK9-208ENST00000555961 SCNN1AP37088 669 aa3.39□□□□□ -1.87
NEK9-208ENST00000555961 HYAL2Q12891 473 aa3.39□□□□□ -1.87
NEK9-208ENST00000555961 FKBP5Q13451 457 aaPredicted RBP3.39□□□□□ -1.87
NEK9-208ENST00000555961 GRIK5Q16478 980 aa3.39□□□□□ -1.87
NEK9-208ENST00000555961 FOXD4L6Q3SYB3 417 aaPredicted RBP3.39□□□□□ -1.87
NEK9-208ENST00000555961 COX20Q5RI15 118 aa3.39□□□□□ -1.87
NEK9-208ENST00000555961 LCE5AQ5TCM9 118 aa3.39□□□□□ -1.87
NEK9-208ENST00000555961 TTC39BQ5VTQ0 682 aaPredicted RBP3.39□□□□□ -1.87
NEK9-208ENST00000555961 FAM117BQ6P1L5 589 aa3.39□□□□□ -1.87
NEK9-208ENST00000555961 FOXD4L3Q6VB84 417 aaPredicted RBP3.39□□□□□ -1.87
NEK9-208ENST00000555961 TTC16Q8NEE8 873 aa3.39□□□□□ -1.87
NEK9-208ENST00000555961 COL26A1Q96A83 441 aa3.39□□□□□ -1.87
NEK9-208ENST00000555961 PATL2C9JE40 543 aaKnown RBP3.38□□□□□ -1.87
NEK9-208ENST00000555961 SUPT5HO00267 1087 aaKnown RBP3.38□□□□□ -1.87
NEK9-208ENST00000555961 DLL1O00548 723 aa3.38□□□□□ -1.87
NEK9-208ENST00000555961 GSC2O15499 205 aa3.38□□□□□ -1.87
NEK9-208ENST00000555961 HOXD8P13378 290 aaPredicted RBP3.38□□□□□ -1.87
NEK9-208ENST00000555961 GLB1P16278 677 aa3.38□□□□□ -1.87
NEK9-208ENST00000555961 SLC51AQ86UW1 340 aa3.38□□□□□ -1.87
NEK9-208ENST00000555961 ABTB2Q8N961 1025 aa3.38□□□□□ -1.87
NEK9-208ENST00000555961 MKNK1Q9BUB5 465 aa3.38□□□□□ -1.87
NEK9-208ENST00000555961 SSBP4Q9BWG4 385 aaPredicted RBP3.38□□□□□ -1.87
NEK9-208ENST00000555961 CEP41Q9BYV8 373 aa3.38□□□□□ -1.87
NEK9-208ENST00000555961 PCMTD2Q9NV79 361 aa3.38□□□□□ -1.87
NEK9-208ENST00000555961 LRFN2Q9ULH4 789 aa3.38□□□□□ -1.87
NEK9-208ENST00000555961 RNF112Q9ULX5 631 aa3.38□□□□□ -1.87
NEK9-208ENST00000555961 PPME1Q9Y570 386 aa3.38□□□□□ -1.87
NEK9-208ENST00000555961 F8W735 103 aaPredicted RBP3.37□□□□□ -1.87
NEK9-208ENST00000555961 HYAL3O43820 417 aaPredicted RBP3.37□□□□□ -1.87
NEK9-208ENST00000555961 DEAF1O75398 565 aaPredicted RBP3.37□□□□□ -1.87
NEK9-208ENST00000555961 RPLP1P05386 114 aaKnown RBP3.37□□□□□ -1.87
NEK9-208ENST00000555961 PCSK2P16519 638 aa3.37□□□□□ -1.87
NEK9-208ENST00000555961 FSTP19883 344 aa3.37□□□□□ -1.87
NEK9-208ENST00000555961 CDC27P30260 824 aa3.37□□□□□ -1.87
NEK9-208ENST00000555961 ZAP70P43403 619 aa3.37□□□□□ -1.87
NEK9-208ENST00000555961 ELOAQ14241 798 aaKnown RBP3.37□□□□□ -1.87
NEK9-208ENST00000555961 CEP135Q66GS9 1140 aa3.37□□□□□ -1.87
NEK9-208ENST00000555961 PRR23CQ6ZRP0 262 aa3.37□□□□□ -1.87
NEK9-208ENST00000555961 TMEM130Q8N3G9 435 aa3.37□□□□□ -1.87
NEK9-208ENST00000555961 CCDC82Q8N4S0 544 aa3.37□□□□□ -1.87
NEK9-208ENST00000555961 OR13H1Q8NG92 308 aa3.37□□□□□ -1.87
NEK9-208ENST00000555961 MEGF10Q96KG7 1140 aa3.37□□□□□ -1.87
NEK9-208ENST00000555961 KCNMB2Q9Y691 235 aa3.37□□□□□ -1.87
NEK9-208ENST00000555961 DHX15O43143 795 aaKnown RBP3.36□□□□□ -1.87
NEK9-208ENST00000555961 PTPRAP18433 802 aa3.36□□□□□ -1.87
NEK9-208ENST00000555961 CABP4P57796 275 aa3.36□□□□□ -1.87
NEK9-208ENST00000555961 NAA30Q147X3 362 aaPredicted RBP3.36□□□□□ -1.87
NEK9-208ENST00000555961 ACAD11Q709F0 780 aa3.36□□□□□ -1.87
NEK9-208ENST00000555961 ILDR2Q71H61 639 aa3.36□□□□□ -1.87
NEK9-208ENST00000555961 NCAPG2Q86XI2 1143 aa3.36□□□□□ -1.87
NEK9-208ENST00000555961 ETFBKMTQ8IXQ9 262 aa3.36□□□□□ -1.87
NEK9-208ENST00000555961 GPR152Q8TDT2 470 aa3.36□□□□□ -1.87
NEK9-208ENST00000555961 PBXIP1Q96AQ6 731 aa3.36□□□□□ -1.87
NEK9-208ENST00000555961 LACRTQ9GZZ8 138 aa3.36□□□□□ -1.87
NEK9-208ENST00000555961 CXXC1Q9P0U4 656 aaPredicted RBP3.36□□□□□ -1.87
NEK9-208ENST00000555961 STIM2Q9P246 746 aa3.36□□□□□ -1.87
NEK9-208ENST00000555961 STOML1Q9UBI4 398 aa3.36□□□□□ -1.87
NEK9-208ENST00000555961 TRIM33Q9UPN9 1127 aa3.36□□□□□ -1.87
NEK9-208ENST00000555961 RAXQ9Y2V3 346 aa3.36□□□□□ -1.87
NEK9-208ENST00000555961 LINC01387J3KSC0 135 aa3.35□□□□□ -1.87
NEK9-208ENST00000555961 SART1O43290 800 aaKnown RBP3.35□□□□□ -1.87
NEK9-208ENST00000555961 ALX3O95076 343 aa3.35□□□□□ -1.87
NEK9-208ENST00000555961 ATG7O95352 703 aa3.35□□□□□ -1.87
NEK9-208ENST00000555961 CD68P34810 354 aaPredicted RBP3.35□□□□□ -1.87
NEK9-208ENST00000555961 GRIK1P39086 918 aa3.35□□□□□ -1.87
NEK9-208ENST00000555961 SETDB1Q15047 1291 aa3.35□□□□□ -1.87
NEK9-208ENST00000555961 TRIP4Q15650 581 aaPredicted RBP3.35□□□□□ -1.87
NEK9-208ENST00000555961 B4GALNT3Q6L9W6 998 aa3.35□□□□□ -1.87
NEK9-208ENST00000555961 ZNF438Q7Z4V0 828 aa3.35□□□□□ -1.87
NEK9-208ENST00000555961 DZIP1LQ8IYY4 767 aaKnown RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms