RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 DBNDD1Q9H9R9 158 aa16.27■□□□□ 0.2
HNRNPC-221ENST00000555883 ANKIB1Q9P2G1 1089 aa16.27■□□□□ 0.2
HNRNPC-221ENST00000555883 GGA1Q9UJY5 639 aa16.27■□□□□ 0.2
HNRNPC-221ENST00000555883 THSD7BQ9C0I4 1608 aa16.27■□□□□ 0.19
HNRNPC-221ENST00000555883 XDHP47989 1333 aa16.26■□□□□ 0.19
HNRNPC-221ENST00000555883 H7C1W4 665 aa16.26■□□□□ 0.19
HNRNPC-221ENST00000555883 HIRAP54198 1017 aaPredicted RBP16.26■□□□□ 0.19
HNRNPC-221ENST00000555883 FLIIQ13045 1269 aa16.26■□□□□ 0.19
HNRNPC-221ENST00000555883 MICALL2Q8IY33 904 aa16.26■□□□□ 0.19
HNRNPC-221ENST00000555883 TTLL11Q8NHH1 800 aa16.26■□□□□ 0.19
HNRNPC-221ENST00000555883 HHIPL1Q96JK4 782 aa16.26■□□□□ 0.19
HNRNPC-221ENST00000555883 PLA2G12BQ9BX93 195 aa16.26■□□□□ 0.19
HNRNPC-221ENST00000555883 WBP1LQ9NX94 342 aa16.26■□□□□ 0.19
HNRNPC-221ENST00000555883 ABT1Q9ULW3 272 aaKnown RBP16.26■□□□□ 0.19
HNRNPC-221ENST00000555883 TLL2Q9Y6L7 1015 aa16.26■□□□□ 0.19
HNRNPC-221ENST00000555883 WDR33Q9C0J8 1336 aaKnown RBP16.25■□□□□ 0.19
HNRNPC-221ENST00000555883 RIMBP2O15034 1052 aa16.25■□□□□ 0.19
HNRNPC-221ENST00000555883 VAMP4O75379 141 aa16.25■□□□□ 0.19
HNRNPC-221ENST00000555883 UFL1O94874 794 aa16.25■□□□□ 0.19
HNRNPC-221ENST00000555883 VIL1P09327 827 aaKnown RBP16.25■□□□□ 0.19
HNRNPC-221ENST00000555883 ECE1P42892 770 aa16.25■□□□□ 0.19
HNRNPC-221ENST00000555883 CDC37L1Q7L3B6 337 aa16.25■□□□□ 0.19
HNRNPC-221ENST00000555883 G2E3Q7L622 706 aa16.25■□□□□ 0.19
HNRNPC-221ENST00000555883 BSDC1Q9NW68 430 aaPredicted RBP16.25■□□□□ 0.19
HNRNPC-221ENST00000555883 TRAF5O00463 557 aa16.24■□□□□ 0.19
HNRNPC-221ENST00000555883 ATP2B4P23634 1241 aa16.24■□□□□ 0.19
HNRNPC-221ENST00000555883 MAP2K1Q02750 393 aaPredicted RBP16.24■□□□□ 0.19
HNRNPC-221ENST00000555883 GCKRQ14397 625 aa16.24■□□□□ 0.19
HNRNPC-221ENST00000555883 CWF19L2Q2TBE0 894 aaKnown RBP16.24■□□□□ 0.19
HNRNPC-221ENST00000555883 LINS1Q8NG48 757 aa16.24■□□□□ 0.19
HNRNPC-221ENST00000555883 TRPM4Q8TD43 1214 aa16.24■□□□□ 0.19
HNRNPC-221ENST00000555883 AIDAQ96BJ3 306 aa16.24■□□□□ 0.19
HNRNPC-221ENST00000555883 MYH16Q9H6N6 1097 aa16.24■□□□□ 0.19
HNRNPC-221ENST00000555883 PRDM10Q9NQV6 1147 aa16.24■□□□□ 0.19
HNRNPC-221ENST00000555883 ZBTB12Q9Y330 459 aaPredicted RBP16.24■□□□□ 0.19
HNRNPC-221ENST00000555883 TRPM7Q96QT4 1865 aa16.24■□□□□ 0.19
HNRNPC-221ENST00000555883 FOXN1O15353 648 aa16.23■□□□□ 0.19
HNRNPC-221ENST00000555883 FKBP5Q13451 457 aaPredicted RBP16.23■□□□□ 0.19
HNRNPC-221ENST00000555883 DOK7Q18PE1 504 aa16.23■□□□□ 0.19
HNRNPC-221ENST00000555883 PODNQ7Z5L7 613 aa16.23■□□□□ 0.19
HNRNPC-221ENST00000555883 SAPCD2Q86UD0 394 aa16.23■□□□□ 0.19
HNRNPC-221ENST00000555883 TNS4Q8IZW8 715 aa16.23■□□□□ 0.19
HNRNPC-221ENST00000555883 DNAAF4Q8WXU2 420 aa16.23■□□□□ 0.19
HNRNPC-221ENST00000555883 JARID2Q92833 1246 aaPredicted RBP16.23■□□□□ 0.19
HNRNPC-221ENST00000555883 CACNA1FO60840 1977 aa16.23■□□□□ 0.19
HNRNPC-221ENST00000555883 CTCFP49711 727 aaPredicted RBP16.22■□□□□ 0.19
HNRNPC-221ENST00000555883 CASP7P55210 303 aa16.22■□□□□ 0.19
HNRNPC-221ENST00000555883 FMR1Q06787 632 aaKnown RBP eCLIP16.22■□□□□ 0.19
HNRNPC-221ENST00000555883 UBE3BQ7Z3V4 1068 aa16.22■□□□□ 0.19
HNRNPC-221ENST00000555883 AGBL3Q8NEM8 1001 aa16.22■□□□□ 0.19
HNRNPC-221ENST00000555883 GLIS2Q9BZE0 524 aaPredicted RBP16.22■□□□□ 0.19
HNRNPC-221ENST00000555883 GREM2Q9H772 168 aa16.22■□□□□ 0.19
HNRNPC-221ENST00000555883 MED23Q9ULK4 1368 aa16.22■□□□□ 0.19
HNRNPC-221ENST00000555883 MYH3P11055 1940 aa16.21■□□□□ 0.19
HNRNPC-221ENST00000555883 G3V3G9 751 aa16.21■□□□□ 0.19
HNRNPC-221ENST00000555883 CELF2O95319 508 aaKnown RBP16.21■□□□□ 0.19
HNRNPC-221ENST00000555883 CSF1RP07333 972 aa16.21■□□□□ 0.19
HNRNPC-221ENST00000555883 EXOSC9Q06265 439 aaKnown RBP16.21■□□□□ 0.19
HNRNPC-221ENST00000555883 DCAF8Q5TAQ9 597 aa16.21■□□□□ 0.19
HNRNPC-221ENST00000555883 CAPNS2Q96L46 248 aa16.21■□□□□ 0.19
HNRNPC-221ENST00000555883 GPR101Q96P66 508 aaPredicted RBP16.21■□□□□ 0.19
HNRNPC-221ENST00000555883 CCDC85AQ96PX6 553 aaPredicted RBP16.21■□□□□ 0.19
HNRNPC-221ENST00000555883 KCNQ5Q9NR82 932 aa16.21■□□□□ 0.19
HNRNPC-221ENST00000555883 MINPP1Q9UNW1 487 aa16.21■□□□□ 0.19
HNRNPC-221ENST00000555883 SHTN1A0MZ66 631 aa16.2■□□□□ 0.18
HNRNPC-221ENST00000555883 MAP2K2P36507 400 aa16.2■□□□□ 0.18
HNRNPC-221ENST00000555883 ZNF280AP59817 542 aaPredicted RBP16.2■□□□□ 0.18
HNRNPC-221ENST00000555883 RSBN1LQ6PCB5 846 aaPredicted RBP16.2■□□□□ 0.18
HNRNPC-221ENST00000555883 SAMD7Q7Z3H4 446 aa16.2■□□□□ 0.18
HNRNPC-221ENST00000555883 IGHMBP2P38935 993 aaKnown RBP16.19■□□□□ 0.18
HNRNPC-221ENST00000555883 MMP14P50281 582 aa16.19■□□□□ 0.18
HNRNPC-221ENST00000555883 LEMD3Q9Y2U8 911 aa16.19■□□□□ 0.18
HNRNPC-221ENST00000555883 PSME4Q14997 1843 aa16.19■□□□□ 0.18
HNRNPC-221ENST00000555883 SCN9AQ15858 1988 aa16.18■□□□□ 0.18
HNRNPC-221ENST00000555883 USP17L3A6NCW0 530 aa16.18■□□□□ 0.18
HNRNPC-221ENST00000555883 USP17L4A6NCW7 530 aa16.18■□□□□ 0.18
HNRNPC-221ENST00000555883 EGFRP00533 1210 aa16.18■□□□□ 0.18
HNRNPC-221ENST00000555883 ITGA6P23229 1130 aa16.18■□□□□ 0.18
HNRNPC-221ENST00000555883 CCT4P50991 539 aaKnown RBP16.18■□□□□ 0.18
HNRNPC-221ENST00000555883 KIF4BQ2VIQ3 1234 aa16.18■□□□□ 0.18
HNRNPC-221ENST00000555883 TBC1D10BQ4KMP7 808 aaPredicted RBP16.18■□□□□ 0.18
HNRNPC-221ENST00000555883 CYP4F22Q6NT55 531 aa16.18■□□□□ 0.18
HNRNPC-221ENST00000555883 USP17L1Q7RTZ2 530 aa16.18■□□□□ 0.18
HNRNPC-221ENST00000555883 DCPSQ96C86 337 aaKnown RBP16.18■□□□□ 0.18
HNRNPC-221ENST00000555883 GMLQ99445 158 aa16.18■□□□□ 0.18
HNRNPC-221ENST00000555883 ANKRD2Q9GZV1 360 aa16.18■□□□□ 0.18
HNRNPC-221ENST00000555883 SPINK5Q9NQ38 1064 aaPredicted RBP16.18■□□□□ 0.18
HNRNPC-221ENST00000555883 ZNF521Q96K83 1311 aa16.18■□□□□ 0.18
HNRNPC-221ENST00000555883 BEND3Q5T5X7 828 aa16.17■□□□□ 0.18
HNRNPC-221ENST00000555883 KRT26Q7Z3Y9 468 aa16.17■□□□□ 0.18
HNRNPC-221ENST00000555883 COA1Q9GZY4 146 aa16.17■□□□□ 0.18
HNRNPC-221ENST00000555883 SALL2Q9Y467 1007 aaPredicted RBP16.17■□□□□ 0.18
HNRNPC-221ENST00000555883 MYO3BQ8WXR4 1341 aa16.17■□□□□ 0.18
HNRNPC-221ENST00000555883 FAM161AQ3B820 660 aa16.16■□□□□ 0.18
HNRNPC-221ENST00000555883 USP48Q86UV5 1035 aa16.16■□□□□ 0.18
HNRNPC-221ENST00000555883 FAM9BQ8IZU0 186 aa16.16■□□□□ 0.18
HNRNPC-221ENST00000555883 PITPNM2Q9BZ72 1349 aa16.16■□□□□ 0.18
HNRNPC-221ENST00000555883 CA12O43570 354 aa16.15■□□□□ 0.18
HNRNPC-221ENST00000555883 USP17L8P0C7I0 530 aa16.15■□□□□ 0.18
HNRNPC-221ENST00000555883 HSPA8P11142 646 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms