RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 USP17L15C9J2P7 530 aa8.49□□□□□ -1.05
SNX6-204ENST00000555541 USP17L10C9JJH3 530 aa8.49□□□□□ -1.05
SNX6-204ENST00000555541 USP17L13C9JLJ4 530 aa8.49□□□□□ -1.05
SNX6-204ENST00000555541 USP17L12C9JPN9 530 aa8.49□□□□□ -1.05
SNX6-204ENST00000555541 USP17L11C9JVI0 530 aa8.49□□□□□ -1.05
SNX6-204ENST00000555541 USP17L21D6R901 530 aa8.49□□□□□ -1.05
SNX6-204ENST00000555541 USP17L18D6R9N7 530 aa8.49□□□□□ -1.05
SNX6-204ENST00000555541 USP17L22D6RA61 530 aa8.49□□□□□ -1.05
SNX6-204ENST00000555541 USP17L17D6RBQ6 530 aa8.49□□□□□ -1.05
SNX6-204ENST00000555541 USP17L19D6RCP7 530 aa8.49□□□□□ -1.05
SNX6-204ENST00000555541 USP17L20D6RJB6 530 aa8.49□□□□□ -1.05
SNX6-204ENST00000555541 PTCD1O75127 700 aaKnown RBP8.49□□□□□ -1.05
SNX6-204ENST00000555541 WISP1O95388 367 aa8.49□□□□□ -1.05
SNX6-204ENST00000555541 GLB1P16278 677 aa8.49□□□□□ -1.05
SNX6-204ENST00000555541 WEE1P30291 646 aa8.49□□□□□ -1.05
SNX6-204ENST00000555541 USP17L24Q0WX57 530 aa8.49□□□□□ -1.05
SNX6-204ENST00000555541 NFIAQ12857 509 aa8.49□□□□□ -1.05
SNX6-204ENST00000555541 DGKZQ13574 1117 aa8.49□□□□□ -1.05
SNX6-204ENST00000555541 ADGRE2Q9UHX3 823 aa8.49□□□□□ -1.05
SNX6-204ENST00000555541 TMEM132AQ24JP5 1023 aa8.48□□□□□ -1.05
SNX6-204ENST00000555541 GDF6Q6KF10 455 aaPredicted RBP8.48□□□□□ -1.05
SNX6-204ENST00000555541 INTS5Q6P9B9 1019 aaKnown RBP8.48□□□□□ -1.05
SNX6-204ENST00000555541 MYO19Q96H55 970 aa8.48□□□□□ -1.05
SNX6-204ENST00000555541 FAM46AQ96IP4 442 aaKnown RBP8.48□□□□□ -1.05
SNX6-204ENST00000555541 USP20Q9Y2K6 914 aa8.48□□□□□ -1.05
SNX6-204ENST00000555541 RTCBQ9Y3I0 505 aaKnown RBP8.48□□□□□ -1.05
SNX6-204ENST00000555541 SOX18P35713 384 aa8.47□□□□□ -1.05
SNX6-204ENST00000555541 CALR3Q96L12 384 aaKnown RBP8.47□□□□□ -1.05
SNX6-204ENST00000555541 C7orf69Q9H7B7 122 aa8.47□□□□□ -1.05
SNX6-204ENST00000555541 TRIM33Q9UPN9 1127 aa8.47□□□□□ -1.05
SNX6-204ENST00000555541 KCNMB2Q9Y691 235 aa8.47□□□□□ -1.05
SNX6-204ENST00000555541 DHX15O43143 795 aaKnown RBP8.46□□□□□ -1.06
SNX6-204ENST00000555541 MMP20O60882 483 aa8.46□□□□□ -1.06
SNX6-204ENST00000555541 RNF43Q68DV7 783 aa8.46□□□□□ -1.06
SNX6-204ENST00000555541 VRTNQ9H8Y1 702 aa8.46□□□□□ -1.06
SNX6-204ENST00000555541 KCNK4Q9NYG8 393 aa8.46□□□□□ -1.06
SNX6-204ENST00000555541 ARID4AP29374 1257 aaPredicted RBP8.45□□□□□ -1.06
SNX6-204ENST00000555541 LMOD1P29536 600 aaPredicted RBP8.45□□□□□ -1.06
SNX6-204ENST00000555541 C11orf91Q3C1V1 193 aa8.45□□□□□ -1.06
SNX6-204ENST00000555541 CFAP70Q5T0N1 1121 aa8.45□□□□□ -1.06
SNX6-204ENST00000555541 TRIM42Q8IWZ5 723 aa8.45□□□□□ -1.06
SNX6-204ENST00000555541 DCAF11Q8TEB1 546 aa8.45□□□□□ -1.06
SNX6-204ENST00000555541 LRFN2Q9ULH4 789 aa8.45□□□□□ -1.06
SNX6-204ENST00000555541 XYLBO75191 536 aa8.44□□□□□ -1.06
SNX6-204ENST00000555541 JAG1P78504 1218 aa8.44□□□□□ -1.06
SNX6-204ENST00000555541 UVSSAQ2YD98 709 aa8.44□□□□□ -1.06
SNX6-204ENST00000555541 ADAMTSL4Q6UY14 1074 aa8.44□□□□□ -1.06
SNX6-204ENST00000555541 NSUN5Q96P11 429 aaKnown RBP8.44□□□□□ -1.06
SNX6-204ENST00000555541 KRTAP4-2Q9BYR5 136 aa8.44□□□□□ -1.06
SNX6-204ENST00000555541 HMX2A2RU54 273 aa8.43□□□□□ -1.06
SNX6-204ENST00000555541 KIAA1211Q6ZU35 1233 aa8.43□□□□□ -1.06
SNX6-204ENST00000555541 CACTIN-AS1Q8N1I8 211 aa8.43□□□□□ -1.06
SNX6-204ENST00000555541 DBNDD2Q9BQY9 259 aa8.43□□□□□ -1.06
SNX6-204ENST00000555541 FOXO3O43524 673 aa8.42□□□□□ -1.06
SNX6-204ENST00000555541 PSAPP07602 524 aa8.42□□□□□ -1.06
SNX6-204ENST00000555541 MYRFLQ96LU7 910 aa8.42□□□□□ -1.06
SNX6-204ENST00000555541 MUC3BQ9H195 1237 aa8.42□□□□□ -1.06
SNX6-204ENST00000555541 PPME1Q9Y570 386 aa8.42□□□□□ -1.06
SNX6-204ENST00000555541 WNT11O96014 354 aa8.41□□□□□ -1.06
SNX6-204ENST00000555541 GHRHP01286 108 aa8.41□□□□□ -1.06
SNX6-204ENST00000555541 GRIK1P39086 918 aa8.41□□□□□ -1.06
SNX6-204ENST00000555541 CD68P34810 354 aaPredicted RBP8.4□□□□□ -1.06
SNX6-204ENST00000555541 CEP41Q9BYV8 373 aa8.4□□□□□ -1.06
SNX6-204ENST00000555541 LINC01387J3KSC0 135 aa8.39□□□□□ -1.07
SNX6-204ENST00000555541 TRIP4Q15650 581 aaPredicted RBP8.39□□□□□ -1.07
SNX6-204ENST00000555541 COL13A1Q5TAT6 717 aaPredicted RBP8.39□□□□□ -1.07
SNX6-204ENST00000555541 ACAD11Q709F0 780 aa8.39□□□□□ -1.07
SNX6-204ENST00000555541 RGL4Q8IZJ4 473 aa8.39□□□□□ -1.07
SNX6-204ENST00000555541 UTP4Q969X6 686 aaKnown RBP8.39□□□□□ -1.07
SNX6-204ENST00000555541 LCE4AQ5TA78 99 aa8.38□□□□□ -1.07
SNX6-204ENST00000555541 NFXL1Q6ZNB6 911 aa8.38□□□□□ -1.07
SNX6-204ENST00000555541 TREML1Q86YW5 311 aa8.38□□□□□ -1.07
SNX6-204ENST00000555541 FAM20CQ8IXL6 584 aa8.38□□□□□ -1.07
SNX6-204ENST00000555541 SHKBP1Q8TBC3 707 aa8.38□□□□□ -1.07
SNX6-204ENST00000555541 FAM83CQ9BQN1 747 aa8.38□□□□□ -1.07
SNX6-204ENST00000555541 ADAM11O75078 769 aa8.37□□□□□ -1.07
SNX6-204ENST00000555541 HOXA10P31260 410 aaPredicted RBP8.37□□□□□ -1.07
SNX6-204ENST00000555541 COX20Q5RI15 118 aa8.37□□□□□ -1.07
SNX6-204ENST00000555541 CLEC10AQ8IUN9 316 aa8.37□□□□□ -1.07
SNX6-204ENST00000555541 CMTR1Q8N1G2 835 aaKnown RBP8.37□□□□□ -1.07
SNX6-204ENST00000555541 FOXD4L4Q8WXT5 416 aaPredicted RBP8.37□□□□□ -1.07
SNX6-204ENST00000555541 COL26A1Q96A83 441 aa8.37□□□□□ -1.07
SNX6-204ENST00000555541 SRPK2P78362 688 aaKnown RBP8.36□□□□□ -1.07
SNX6-204ENST00000555541 FAM69CQ0P6D2 419 aa8.36□□□□□ -1.07
SNX6-204ENST00000555541 FKBP5Q13451 457 aaPredicted RBP8.36□□□□□ -1.07
SNX6-204ENST00000555541 CDCA8Q53HL2 280 aa8.36□□□□□ -1.07
SNX6-204ENST00000555541 FAM26DQ5JW98 314 aa8.36□□□□□ -1.07
SNX6-204ENST00000555541 OGFOD2Q6N063 350 aa8.36□□□□□ -1.07
SNX6-204ENST00000555541 TXNDC11Q6PKC3 985 aa8.36□□□□□ -1.07
SNX6-204ENST00000555541 CBLL1Q75N03 491 aa8.36□□□□□ -1.07
SNX6-204ENST00000555541 ABI1Q8IZP0 508 aa8.36□□□□□ -1.07
SNX6-204ENST00000555541 FAM200AQ8TCP9 573 aa8.36□□□□□ -1.07
SNX6-204ENST00000555541 RBSNQ9H1K0 784 aa8.36□□□□□ -1.07
SNX6-204ENST00000555541 ATP11AP98196 1134 aa8.35□□□□□ -1.07
SNX6-204ENST00000555541 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.35□□□□□ -1.07
SNX6-204ENST00000555541 OR13H1Q8NG92 308 aa8.35□□□□□ -1.07
SNX6-204ENST00000555541 ZNF777Q9ULD5 760 aaPredicted RBP8.35□□□□□ -1.07
SNX6-204ENST00000555541 OCLNQ16625 522 aa8.34□□□□□ -1.07
SNX6-204ENST00000555541 NLRP13Q86W25 1043 aa8.34□□□□□ -1.07
SNX6-204ENST00000555541 FSCN2O14926 492 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 178.5 ms