RNA–Protein interactions for RNA: ENST00000555322.5

RPGRIP1-207, Transcript of RPGR interacting protein 1, humanhuman

TSL 1 (best)

Gene RPGRIP1, Length 2,373 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-207ENST00000555322 INTS4Q96HW7 963 aaKnown RBP11.04□□□□□ -0.64
RPGRIP1-207ENST00000555322 ZNF594Q96JF6 807 aaPredicted RBP11.04□□□□□ -0.64
RPGRIP1-207ENST00000555322 IL25Q9H293 177 aa11.04□□□□□ -0.64
RPGRIP1-207ENST00000555322 NIP7Q9Y221 180 aaKnown RBP eCLIP11.04□□□□□ -0.64
RPGRIP1-207ENST00000555322 ZKSCAN1P17029 563 aaPredicted RBP11.03□□□□□ -0.64
RPGRIP1-207ENST00000555322 ATP2B3Q16720 1220 aa11.03□□□□□ -0.64
RPGRIP1-207ENST00000555322 TSGA10IPQ3SY00 556 aa11.03□□□□□ -0.64
RPGRIP1-207ENST00000555322 METTL24Q5JXM2 366 aa11.03□□□□□ -0.64
RPGRIP1-207ENST00000555322 SEPT12Q8IYM1 358 aa11.03□□□□□ -0.64
RPGRIP1-207ENST00000555322 NEUROD6Q96NK8 337 aa11.03□□□□□ -0.64
RPGRIP1-207ENST00000555322 CCNL1Q9UK58 526 aaPredicted RBP11.03□□□□□ -0.64
RPGRIP1-207ENST00000555322 SNX14Q9Y5W7 946 aa11.03□□□□□ -0.64
RPGRIP1-207ENST00000555322 C4AP0C0L4 1744 aa11.03□□□□□ -0.64
RPGRIP1-207ENST00000555322 IFIT1P09914 478 aaKnown RBP11.03□□□□□ -0.64
RPGRIP1-207ENST00000555322 NECTIN1Q15223 517 aa11.03□□□□□ -0.64
RPGRIP1-207ENST00000555322 SLC10A5Q5PT55 438 aa11.03□□□□□ -0.64
RPGRIP1-207ENST00000555322 USPL1Q5W0Q7 1092 aa11.03□□□□□ -0.64
RPGRIP1-207ENST00000555322 PUS3Q9BZE2 481 aaKnown RBP11.03□□□□□ -0.64
RPGRIP1-207ENST00000555322 CNNM1Q9NRU3 951 aa11.03□□□□□ -0.64
RPGRIP1-207ENST00000555322 PALD1Q9ULE6 856 aa11.03□□□□□ -0.64
RPGRIP1-207ENST00000555322 PDE8BO95263 885 aa11.02□□□□□ -0.65
RPGRIP1-207ENST00000555322 UQCRFS1P1P0C7P4 283 aa11.02□□□□□ -0.65
RPGRIP1-207ENST00000555322 NEK4P51957 841 aa11.02□□□□□ -0.65
RPGRIP1-207ENST00000555322 CUL4AQ13619 759 aa11.02□□□□□ -0.65
RPGRIP1-207ENST00000555322 KRT32Q14532 448 aa11.02□□□□□ -0.65
RPGRIP1-207ENST00000555322 PUM3Q15397 648 aaKnown RBP11.02□□□□□ -0.65
RPGRIP1-207ENST00000555322 SLC27A3Q5K4L6 730 aa11.02□□□□□ -0.65
RPGRIP1-207ENST00000555322 TTC39AQ5SRH9 613 aa11.02□□□□□ -0.65
RPGRIP1-207ENST00000555322 XAGE2Q96GT9 111 aa11.02□□□□□ -0.65
RPGRIP1-207ENST00000555322 RPAP1Q9BWH6 1393 aaPredicted RBP11.02□□□□□ -0.65
RPGRIP1-207ENST00000555322 A0A0D9SFI3 127 aa11.02□□□□□ -0.65
RPGRIP1-207ENST00000555322 PSMA5P28066 241 aa11.02□□□□□ -0.65
RPGRIP1-207ENST00000555322 SSFA2P28290 1259 aa11.02□□□□□ -0.65
RPGRIP1-207ENST00000555322 NUCB2P80303 420 aa11.02□□□□□ -0.65
RPGRIP1-207ENST00000555322 NBR1Q14596 966 aa11.02□□□□□ -0.65
RPGRIP1-207ENST00000555322 RAB3GAP1Q15042 981 aa11.02□□□□□ -0.65
RPGRIP1-207ENST00000555322 TTF1Q15361 905 aaPredicted RBP11.02□□□□□ -0.65
RPGRIP1-207ENST00000555322 SF3B3Q15393 1217 aaKnown RBP11.02□□□□□ -0.65
RPGRIP1-207ENST00000555322 MCMDC2Q4G0Z9 681 aa11.02□□□□□ -0.65
RPGRIP1-207ENST00000555322 FAM196AQ6ZSG2 479 aa11.02□□□□□ -0.65
RPGRIP1-207ENST00000555322 LPIN2Q92539 896 aa11.02□□□□□ -0.65
RPGRIP1-207ENST00000555322 CDC5LQ99459 802 aaKnown RBP11.02□□□□□ -0.65
RPGRIP1-207ENST00000555322 ALDH8A1Q9H2A2 487 aaPredicted RBP11.02□□□□□ -0.65
RPGRIP1-207ENST00000555322 RTCBQ9Y3I0 505 aaKnown RBP11.02□□□□□ -0.65
RPGRIP1-207ENST00000555322 U3KPZ7 1027 aaPredicted RBP11.02□□□□□ -0.65
RPGRIP1-207ENST00000555322 ZBTB22O15209 634 aa11.01□□□□□ -0.65
RPGRIP1-207ENST00000555322 GORABQ5T7V8 394 aa11.01□□□□□ -0.65
RPGRIP1-207ENST00000555322 CLEC17AQ6ZS10 378 aa11.01□□□□□ -0.65
RPGRIP1-207ENST00000555322 FAM227BQ96M60 508 aa11.01□□□□□ -0.65
RPGRIP1-207ENST00000555322 DNAJC2Q99543 621 aaKnown RBP11.01□□□□□ -0.65
RPGRIP1-207ENST00000555322 FGFR2P21802 821 aa11.01□□□□□ -0.65
RPGRIP1-207ENST00000555322 ARID4AP29374 1257 aaPredicted RBP11.01□□□□□ -0.65
RPGRIP1-207ENST00000555322 IGHMBP2P38935 993 aaKnown RBP11.01□□□□□ -0.65
RPGRIP1-207ENST00000555322 TIMM10P62072 90 aa11.01□□□□□ -0.65
RPGRIP1-207ENST00000555322 ZMYM1Q5SVZ6 1142 aa11.01□□□□□ -0.65
RPGRIP1-207ENST00000555322 VPS53Q5VIR6 699 aa11.01□□□□□ -0.65
RPGRIP1-207ENST00000555322 ZSCAN25Q6NSZ9 544 aa11.01□□□□□ -0.65
RPGRIP1-207ENST00000555322 TTC14Q96N46 770 aa11.01□□□□□ -0.65
RPGRIP1-207ENST00000555322 DSCC1Q9BVC3 393 aa11.01□□□□□ -0.65
RPGRIP1-207ENST00000555322 ANO8Q9HCE9 1232 aaPredicted RBP11.01□□□□□ -0.65
RPGRIP1-207ENST00000555322 RBM8AQ9Y5S9 174 aaKnown RBP11.01□□□□□ -0.65
RPGRIP1-207ENST00000555322 A0A1B0GUL6 1792 aa11□□□□□ -0.65
RPGRIP1-207ENST00000555322 KAT6BQ8WYB5 2073 aa11□□□□□ -0.65
RPGRIP1-207ENST00000555322 DDX11L8A8MPP1 907 aa11□□□□□ -0.65
RPGRIP1-207ENST00000555322 TAF5LO75529 589 aa11□□□□□ -0.65
RPGRIP1-207ENST00000555322 SLC5A1P13866 664 aa11□□□□□ -0.65
RPGRIP1-207ENST00000555322 SYNE4Q8N205 404 aa11□□□□□ -0.65
RPGRIP1-207ENST00000555322 QTRT2Q9H974 415 aaKnown RBP11□□□□□ -0.65
RPGRIP1-207ENST00000555322 ZSWIM6Q9HCJ5 1215 aa11□□□□□ -0.65
RPGRIP1-207ENST00000555322 CASZ1Q86V15 1759 aa11□□□□□ -0.65
RPGRIP1-207ENST00000555322 GNPATO15228 680 aa10.99□□□□□ -0.65
RPGRIP1-207ENST00000555322 RNF113AO15541 343 aaKnown RBP10.99□□□□□ -0.65
RPGRIP1-207ENST00000555322 ZPR1O75312 459 aa10.99□□□□□ -0.65
RPGRIP1-207ENST00000555322 PTH1RQ03431 593 aa10.99□□□□□ -0.65
RPGRIP1-207ENST00000555322 CREB3L3Q68CJ9 461 aa10.99□□□□□ -0.65
RPGRIP1-207ENST00000555322 GBP4Q96PP9 640 aa10.99□□□□□ -0.65
RPGRIP1-207ENST00000555322 MPHOSPH8Q99549 860 aa10.99□□□□□ -0.65
RPGRIP1-207ENST00000555322 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.99□□□□□ -0.65
RPGRIP1-207ENST00000555322 RGPD3A6NKT7 1758 aaPredicted RBP10.99□□□□□ -0.65
RPGRIP1-207ENST00000555322 RGPD4Q7Z3J3 1758 aa10.99□□□□□ -0.65
RPGRIP1-207ENST00000555322 GOLIM4O00461 696 aa10.99□□□□□ -0.65
RPGRIP1-207ENST00000555322 KCNJ4P48050 445 aa10.99□□□□□ -0.65
RPGRIP1-207ENST00000555322 ANKRD1Q15327 319 aa10.99□□□□□ -0.65
RPGRIP1-207ENST00000555322 ZNF772Q68DY9 489 aaPredicted RBP10.99□□□□□ -0.65
RPGRIP1-207ENST00000555322 TMX3Q96JJ7 454 aa10.99□□□□□ -0.65
RPGRIP1-207ENST00000555322 ZSCAN31Q96LW9 406 aaPredicted RBP10.99□□□□□ -0.65
RPGRIP1-207ENST00000555322 CARMIL3Q8ND23 1372 aa10.99□□□□□ -0.65
RPGRIP1-207ENST00000555322 SLC27A2O14975 620 aa10.98□□□□□ -0.65
RPGRIP1-207ENST00000555322 DDX46Q7L014 1031 aaKnown RBP10.98□□□□□ -0.65
RPGRIP1-207ENST00000555322 BCL2L12Q9HB09 334 aa10.98□□□□□ -0.65
RPGRIP1-207ENST00000555322 SH2B1Q9NRF2 756 aaPredicted RBP10.98□□□□□ -0.65
RPGRIP1-207ENST00000555322 CYP46A1Q9Y6A2 500 aa10.98□□□□□ -0.65
RPGRIP1-207ENST00000555322 UBR3Q6ZT12 1888 aa10.98□□□□□ -0.65
RPGRIP1-207ENST00000555322 HCLS1P14317 486 aaPredicted RBP10.98□□□□□ -0.65
RPGRIP1-207ENST00000555322 PRPF40BQ6NWY9 871 aaKnown RBP10.98□□□□□ -0.65
RPGRIP1-207ENST00000555322 KRT27Q7Z3Y8 459 aa10.98□□□□□ -0.65
RPGRIP1-207ENST00000555322 SETDB2Q96T68 719 aa10.98□□□□□ -0.65
RPGRIP1-207ENST00000555322 DOCK2Q92608 1830 aa10.98□□□□□ -0.65
RPGRIP1-207ENST00000555322 MYH7P12883 1935 aa10.98□□□□□ -0.65
RPGRIP1-207ENST00000555322 BRWD3Q6RI45 1802 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms