RNA–Protein interactions for RNA: ENST00000555295.1

PABPN1-205, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-205ENST00000555295 PAXIP1Q6ZW49 1069 aaPredicted RBP16.42■□□□□ 0.22
PABPN1-205ENST00000555295 DPF2Q92785 391 aa16.42■□□□□ 0.22
PABPN1-205ENST00000555295 JARID2Q92833 1246 aaPredicted RBP16.42■□□□□ 0.22
PABPN1-205ENST00000555295 CNOT7Q9UIV1 285 aaKnown RBP16.42■□□□□ 0.22
PABPN1-205ENST00000555295 XDHP47989 1333 aa16.42■□□□□ 0.22
PABPN1-205ENST00000555295 RASSF10A6NK89 507 aa16.41■□□□□ 0.22
PABPN1-205ENST00000555295 NEURL1BA8MQ27 555 aa16.41■□□□□ 0.22
PABPN1-205ENST00000555295 ECE1P42892 770 aa16.41■□□□□ 0.22
PABPN1-205ENST00000555295 VEGFBP49765 207 aa16.41■□□□□ 0.22
PABPN1-205ENST00000555295 MICALL2Q8IY33 904 aa16.41■□□□□ 0.22
PABPN1-205ENST00000555295 FAM9BQ8IZU0 186 aa16.41■□□□□ 0.22
PABPN1-205ENST00000555295 PSMD14O00487 310 aa16.4■□□□□ 0.22
PABPN1-205ENST00000555295 IGKV5-2P06315 115 aa16.4■□□□□ 0.22
PABPN1-205ENST00000555295 ATP2B4P23634 1241 aa16.4■□□□□ 0.22
PABPN1-205ENST00000555295 DOK7Q18PE1 504 aa16.4■□□□□ 0.22
PABPN1-205ENST00000555295 CWF19L2Q2TBE0 894 aaKnown RBP16.4■□□□□ 0.22
PABPN1-205ENST00000555295 UBE3BQ7Z3V4 1068 aa16.4■□□□□ 0.22
PABPN1-205ENST00000555295 DNAAF4Q8WXU2 420 aa16.4■□□□□ 0.22
PABPN1-205ENST00000555295 IGHMBP2P38935 993 aaKnown RBP16.39■□□□□ 0.21
PABPN1-205ENST00000555295 COL13A1Q5TAT6 717 aaPredicted RBP16.39■□□□□ 0.21
PABPN1-205ENST00000555295 CDC37L1Q7L3B6 337 aa16.39■□□□□ 0.21
PABPN1-205ENST00000555295 G2E3Q7L622 706 aa16.39■□□□□ 0.21
PABPN1-205ENST00000555295 TNS4Q8IZW8 715 aa16.39■□□□□ 0.21
PABPN1-205ENST00000555295 RTL9Q8NET4 1388 aa16.38■□□□□ 0.21
PABPN1-205ENST00000555295 TRAF5O00463 557 aa16.38■□□□□ 0.21
PABPN1-205ENST00000555295 EXOSC9Q06265 439 aaKnown RBP16.38■□□□□ 0.21
PABPN1-205ENST00000555295 GCKRQ14397 625 aa16.38■□□□□ 0.21
PABPN1-205ENST00000555295 LINS1Q8NG48 757 aa16.38■□□□□ 0.21
PABPN1-205ENST00000555295 TTLL11Q8NHH1 800 aa16.38■□□□□ 0.21
PABPN1-205ENST00000555295 GPR101Q96P66 508 aaPredicted RBP16.38■□□□□ 0.21
PABPN1-205ENST00000555295 ZBTB12Q9Y330 459 aaPredicted RBP16.38■□□□□ 0.21
PABPN1-205ENST00000555295 WDR33Q9C0J8 1336 aaKnown RBP16.38■□□□□ 0.21
PABPN1-205ENST00000555295 H7C1W4 665 aa16.37■□□□□ 0.21
PABPN1-205ENST00000555295 VAMP4O75379 141 aa16.37■□□□□ 0.21
PABPN1-205ENST00000555295 CELF2O95319 508 aaKnown RBP16.37■□□□□ 0.21
PABPN1-205ENST00000555295 MAP2K1Q02750 393 aaPredicted RBP16.37■□□□□ 0.21
PABPN1-205ENST00000555295 TRPM4Q8TD43 1214 aa16.37■□□□□ 0.21
PABPN1-205ENST00000555295 BEGAINQ9BUH8 593 aa16.37■□□□□ 0.21
PABPN1-205ENST00000555295 GLIS2Q9BZE0 524 aaPredicted RBP16.37■□□□□ 0.21
PABPN1-205ENST00000555295 GREM2Q9H772 168 aa16.37■□□□□ 0.21
PABPN1-205ENST00000555295 BSDC1Q9NW68 430 aaPredicted RBP16.37■□□□□ 0.21
PABPN1-205ENST00000555295 PGAP2Q9UHJ9 254 aa16.37■□□□□ 0.21
PABPN1-205ENST00000555295 COL4A1P02462 1669 aa16.37■□□□□ 0.21
PABPN1-205ENST00000555295 CTCFP49711 727 aaPredicted RBP16.36■□□□□ 0.21
PABPN1-205ENST00000555295 GRM1Q13255 1194 aa16.36■□□□□ 0.21
PABPN1-205ENST00000555295 DCPSQ96C86 337 aaKnown RBP16.36■□□□□ 0.21
PABPN1-205ENST00000555295 MPHOSPH8Q99549 860 aa16.36■□□□□ 0.21
PABPN1-205ENST00000555295 ZNF408Q9H9D4 720 aa16.36■□□□□ 0.21
PABPN1-205ENST00000555295 TLL2Q9Y6L7 1015 aa16.36■□□□□ 0.21
PABPN1-205ENST00000555295 CACNA1FO60840 1977 aa16.36■□□□□ 0.21
PABPN1-205ENST00000555295 TRPM7Q96QT4 1865 aa16.35■□□□□ 0.21
PABPN1-205ENST00000555295 MYH3P11055 1940 aa16.35■□□□□ 0.21
PABPN1-205ENST00000555295 TBC1D10BQ4KMP7 808 aaPredicted RBP16.35■□□□□ 0.21
PABPN1-205ENST00000555295 SAMD7Q7Z3H4 446 aa16.35■□□□□ 0.21
PABPN1-205ENST00000555295 PODNQ7Z5L7 613 aa16.35■□□□□ 0.21
PABPN1-205ENST00000555295 CAPNS2Q96L46 248 aa16.35■□□□□ 0.21
PABPN1-205ENST00000555295 PLA2G12BQ9BX93 195 aa16.35■□□□□ 0.21
PABPN1-205ENST00000555295 VIL1P09327 827 aaKnown RBP16.34■□□□□ 0.21
PABPN1-205ENST00000555295 HIRAP54198 1017 aaPredicted RBP16.34■□□□□ 0.21
PABPN1-205ENST00000555295 KIF4BQ2VIQ3 1234 aa16.34■□□□□ 0.21
PABPN1-205ENST00000555295 RBM26Q5T8P6 1007 aaKnown RBP16.34■□□□□ 0.21
PABPN1-205ENST00000555295 CST9Q5W186 159 aa16.34■□□□□ 0.21
PABPN1-205ENST00000555295 AGBL3Q8NEM8 1001 aa16.34■□□□□ 0.21
PABPN1-205ENST00000555295 ANKRD2Q9GZV1 360 aa16.34■□□□□ 0.21
PABPN1-205ENST00000555295 MED23Q9ULK4 1368 aa16.34■□□□□ 0.21
PABPN1-205ENST00000555295 SHTN1A0MZ66 631 aa16.33■□□□□ 0.2
PABPN1-205ENST00000555295 FOXN1O15353 648 aa16.33■□□□□ 0.2
PABPN1-205ENST00000555295 ITGA6P23229 1130 aa16.33■□□□□ 0.2
PABPN1-205ENST00000555295 KCNJ4P48050 445 aa16.33■□□□□ 0.2
PABPN1-205ENST00000555295 FMR1Q06787 632 aaKnown RBP eCLIP16.33■□□□□ 0.2
PABPN1-205ENST00000555295 RSBN1LQ6PCB5 846 aaPredicted RBP16.33■□□□□ 0.2
PABPN1-205ENST00000555295 KRT26Q7Z3Y9 468 aa16.33■□□□□ 0.2
PABPN1-205ENST00000555295 SULF1Q8IWU6 871 aa16.33■□□□□ 0.2
PABPN1-205ENST00000555295 WBP1LQ9NX94 342 aa16.33■□□□□ 0.2
PABPN1-205ENST00000555295 MINPP1Q9UNW1 487 aa16.33■□□□□ 0.2
PABPN1-205ENST00000555295 LEMD3Q9Y2U8 911 aa16.33■□□□□ 0.2
PABPN1-205ENST00000555295 ANKRD18BA2A2Z9 1011 aa16.32■□□□□ 0.2
PABPN1-205ENST00000555295 USP17L3A6NCW0 530 aa16.32■□□□□ 0.2
PABPN1-205ENST00000555295 USP17L4A6NCW7 530 aa16.32■□□□□ 0.2
PABPN1-205ENST00000555295 ZNF609O15014 1411 aa16.32■□□□□ 0.2
PABPN1-205ENST00000555295 CCT4P50991 539 aaKnown RBP16.32■□□□□ 0.2
PABPN1-205ENST00000555295 FAM161AQ3B820 660 aa16.32■□□□□ 0.2
PABPN1-205ENST00000555295 CYP4F22Q6NT55 531 aa16.32■□□□□ 0.2
PABPN1-205ENST00000555295 USP17L1Q7RTZ2 530 aa16.32■□□□□ 0.2
PABPN1-205ENST00000555295 USP48Q86UV5 1035 aa16.32■□□□□ 0.2
PABPN1-205ENST00000555295 HHIPL1Q96JK4 782 aa16.32■□□□□ 0.2
PABPN1-205ENST00000555295 PRDM10Q9NQV6 1147 aa16.32■□□□□ 0.2
PABPN1-205ENST00000555295 KCNQ5Q9NR82 932 aa16.32■□□□□ 0.2
PABPN1-205ENST00000555295 CHMP3Q9Y3E7 222 aa16.32■□□□□ 0.2
PABPN1-205ENST00000555295 USP17L8P0C7I0 530 aa16.31■□□□□ 0.2
PABPN1-205ENST00000555295 SAPCD2Q86UD0 394 aa16.31■□□□□ 0.2
PABPN1-205ENST00000555295 FBXW7Q969H0 707 aa16.31■□□□□ 0.2
PABPN1-205ENST00000555295 COA1Q9GZY4 146 aa16.31■□□□□ 0.2
PABPN1-205ENST00000555295 MYO3BQ8WXR4 1341 aa16.3■□□□□ 0.2
PABPN1-205ENST00000555295 MAP2K2P36507 400 aa16.3■□□□□ 0.2
PABPN1-205ENST00000555295 IFIT5Q13325 482 aaKnown RBP16.3■□□□□ 0.2
PABPN1-205ENST00000555295 TAF7LQ5H9L4 462 aa16.3■□□□□ 0.2
PABPN1-205ENST00000555295 OGFOD1Q8N543 542 aa16.3■□□□□ 0.2
PABPN1-205ENST00000555295 GGA3Q9NZ52 723 aa16.3■□□□□ 0.2
PABPN1-205ENST00000555295 SPEF2Q9C093 1822 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms