RNA–Protein interactions for RNA: ENST00000555094.5

GABRB3-208, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,494 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-208ENST00000555094 PNPLA7Q6ZV29 1317 aa13.27□□□□□ -0.29
GABRB3-208ENST00000555094 TRIM6-TRIM34B2RNG4 842 aa13.26□□□□□ -0.29
GABRB3-208ENST00000555094 GTF2E1P29083 439 aaPredicted RBP13.26□□□□□ -0.29
GABRB3-208ENST00000555094 MFAP1P55081 439 aaKnown RBP13.26□□□□□ -0.29
GABRB3-208ENST00000555094 EN1Q05925 392 aaPredicted RBP13.26□□□□□ -0.29
GABRB3-208ENST00000555094 METTL24Q5JXM2 366 aa13.26□□□□□ -0.29
GABRB3-208ENST00000555094 CNBD1Q8NA66 436 aa13.26□□□□□ -0.29
GABRB3-208ENST00000555094 CNNM1Q9NRU3 951 aa13.26□□□□□ -0.29
GABRB3-208ENST00000555094 A0A1B0GUL7 405 aa13.25□□□□□ -0.29
GABRB3-208ENST00000555094 MAP4K4O95819 1239 aaPredicted RBP13.25□□□□□ -0.29
GABRB3-208ENST00000555094 ATP5JP18859 108 aa13.25□□□□□ -0.29
GABRB3-208ENST00000555094 PRR5LQ6MZQ0 368 aa13.25□□□□□ -0.29
GABRB3-208ENST00000555094 CCDC24Q8N4L8 307 aa13.25□□□□□ -0.29
GABRB3-208ENST00000555094 FLAD1Q8NFF5 587 aa13.25□□□□□ -0.29
GABRB3-208ENST00000555094 RILPL2Q969X0 211 aa13.25□□□□□ -0.29
GABRB3-208ENST00000555094 TBC1D32Q96NH3 1257 aa13.25□□□□□ -0.29
GABRB3-208ENST00000555094 MROH5Q6ZUA9 1318 aa13.25□□□□□ -0.29
GABRB3-208ENST00000555094 COL11A2P13942 1736 aaPredicted RBP13.24□□□□□ -0.29
GABRB3-208ENST00000555094 POLRMTO00411 1230 aaKnown RBP13.24□□□□□ -0.29
GABRB3-208ENST00000555094 CNTROBQ8N137 903 aa13.24□□□□□ -0.29
GABRB3-208ENST00000555094 CDC5LQ99459 802 aaKnown RBP13.24□□□□□ -0.29
GABRB3-208ENST00000555094 UPF2Q9HAU5 1272 aaKnown RBP13.24□□□□□ -0.29
GABRB3-208ENST00000555094 AKAP2Q9Y2D5 859 aa13.24□□□□□ -0.29
GABRB3-208ENST00000555094 AKAP11Q9UKA4 1901 aa13.24□□□□□ -0.29
GABRB3-208ENST00000555094 CHMLP26374 656 aa13.23□□□□□ -0.29
GABRB3-208ENST00000555094 ADORA1P30542 326 aa13.23□□□□□ -0.29
GABRB3-208ENST00000555094 IGHMBP2P38935 993 aaKnown RBP13.23□□□□□ -0.29
GABRB3-208ENST00000555094 ANP32AP39687 249 aaKnown RBP13.23□□□□□ -0.29
GABRB3-208ENST00000555094 BAG6P46379 1132 aa13.23□□□□□ -0.29
GABRB3-208ENST00000555094 TIMM10P62072 90 aa13.23□□□□□ -0.29
GABRB3-208ENST00000555094 ATP2B3Q16720 1220 aa13.23□□□□□ -0.29
GABRB3-208ENST00000555094 CASC1Q6TDU7 716 aa13.23□□□□□ -0.29
GABRB3-208ENST00000555094 UPF1Q92900 1129 aaKnown RBP eCLIP13.23□□□□□ -0.29
GABRB3-208ENST00000555094 NEUROD6Q96NK8 337 aa13.23□□□□□ -0.29
GABRB3-208ENST00000555094 NLRP3Q96P20 1036 aa13.23□□□□□ -0.29
GABRB3-208ENST00000555094 MPHOSPH8Q99549 860 aa13.23□□□□□ -0.29
GABRB3-208ENST00000555094 LRRC37AA6NMS7 1700 aa13.23□□□□□ -0.29
GABRB3-208ENST00000555094 PDE8BO95263 885 aa13.23□□□□□ -0.29
GABRB3-208ENST00000555094 SERPINB2P05120 415 aa13.23□□□□□ -0.29
GABRB3-208ENST00000555094 ANKRD18AQ8IVF6 992 aa13.23□□□□□ -0.29
GABRB3-208ENST00000555094 BOLA2Q9H3K6 86 aa13.23□□□□□ -0.29
GABRB3-208ENST00000555094 MYH7P12883 1935 aa13.22□□□□□ -0.29
GABRB3-208ENST00000555094 RFX7Q2KHR2 1363 aa13.22□□□□□ -0.29
GABRB3-208ENST00000555094 NPHP1O15259 732 aa13.22□□□□□ -0.29
GABRB3-208ENST00000555094 FGFR2P21802 821 aa13.22□□□□□ -0.29
GABRB3-208ENST00000555094 SF3B2Q13435 895 aaKnown RBP13.22□□□□□ -0.29
GABRB3-208ENST00000555094 PUM3Q15397 648 aaKnown RBP13.22□□□□□ -0.29
GABRB3-208ENST00000555094 SLC15A2Q16348 729 aa13.22□□□□□ -0.29
GABRB3-208ENST00000555094 DEFB132Q7Z7B7 95 aa13.22□□□□□ -0.29
GABRB3-208ENST00000555094 CELF1Q92879 486 aaKnown RBP13.22□□□□□ -0.29
GABRB3-208ENST00000555094 EVI5LQ96CN4 794 aa13.22□□□□□ -0.29
GABRB3-208ENST00000555094 XAGE2Q96GT9 111 aa13.22□□□□□ -0.29
GABRB3-208ENST00000555094 HAUS7Q99871 368 aa13.22□□□□□ -0.29
GABRB3-208ENST00000555094 ESYT1Q9BSJ8 1104 aa13.22□□□□□ -0.29
GABRB3-208ENST00000555094 STK32BQ9NY57 414 aa13.22□□□□□ -0.29
GABRB3-208ENST00000555094 ATF5Q9Y2D1 282 aaPredicted RBP13.22□□□□□ -0.29
GABRB3-208ENST00000555094 EIF5BO60841 1220 aaKnown RBP13.21□□□□□ -0.3
GABRB3-208ENST00000555094 ST5P78524 1137 aa13.21□□□□□ -0.3
GABRB3-208ENST00000555094 NLGN1Q8N2Q7 840 aa13.21□□□□□ -0.3
GABRB3-208ENST00000555094 HELBQ8NG08 1087 aaPredicted RBP13.21□□□□□ -0.3
GABRB3-208ENST00000555094 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.21□□□□□ -0.3
GABRB3-208ENST00000555094 C22orf23Q9BZE7 217 aa13.21□□□□□ -0.3
GABRB3-208ENST00000555094 CHRNDQ07001 517 aa13.2□□□□□ -0.3
GABRB3-208ENST00000555094 CRY2Q49AN0 593 aa13.2□□□□□ -0.3
GABRB3-208ENST00000555094 EDC3Q96F86 508 aaKnown RBP13.2□□□□□ -0.3
GABRB3-208ENST00000555094 BSDC1Q9NW68 430 aaPredicted RBP13.2□□□□□ -0.3
GABRB3-208ENST00000555094 DOCK2Q92608 1830 aa13.2□□□□□ -0.3
GABRB3-208ENST00000555094 RBM25P49756 843 aaKnown RBP13.19□□□□□ -0.3
GABRB3-208ENST00000555094 LPIN2Q92539 896 aa13.19□□□□□ -0.3
GABRB3-208ENST00000555094 IL25Q9H293 177 aa13.19□□□□□ -0.3
GABRB3-208ENST00000555094 NDUFB9Q9Y6M9 179 aa13.19□□□□□ -0.3
GABRB3-208ENST00000555094 LTBP1Q14766 1721 aa13.19□□□□□ -0.3
GABRB3-208ENST00000555094 MYO5AQ9Y4I1 1855 aaKnown RBP13.18□□□□□ -0.3
GABRB3-208ENST00000555094 TAF5LO75529 589 aa13.18□□□□□ -0.3
GABRB3-208ENST00000555094 REC8O95072 547 aa13.18□□□□□ -0.3
GABRB3-208ENST00000555094 MMP10P09238 476 aa13.18□□□□□ -0.3
GABRB3-208ENST00000555094 SLC5A1P13866 664 aa13.18□□□□□ -0.3
GABRB3-208ENST00000555094 RPS8P62241 208 aaKnown RBP13.18□□□□□ -0.3
GABRB3-208ENST00000555094 TTC39AQ5SRH9 613 aa13.18□□□□□ -0.3
GABRB3-208ENST00000555094 GORABQ5T7V8 394 aa13.18□□□□□ -0.3
GABRB3-208ENST00000555094 MSL1Q68DK7 614 aa13.18□□□□□ -0.3
GABRB3-208ENST00000555094 DDX46Q7L014 1031 aaKnown RBP13.18□□□□□ -0.3
GABRB3-208ENST00000555094 DNAJC2Q99543 621 aaKnown RBP13.18□□□□□ -0.3
GABRB3-208ENST00000555094 FSD1Q9BTV5 496 aa13.18□□□□□ -0.3
GABRB3-208ENST00000555094 MYH13Q9UKX3 1938 aa13.18□□□□□ -0.3
GABRB3-208ENST00000555094 KLRG2A4D1S0 409 aaPredicted RBP13.17□□□□□ -0.3
GABRB3-208ENST00000555094 SNAP23O00161 211 aa13.17□□□□□ -0.3
GABRB3-208ENST00000555094 IFIT1P09914 478 aaKnown RBP13.17□□□□□ -0.3
GABRB3-208ENST00000555094 GRAPQ13588 217 aa13.17□□□□□ -0.3
GABRB3-208ENST00000555094 SCARF1Q14162 830 aa13.17□□□□□ -0.3
GABRB3-208ENST00000555094 CCDC158Q5M9N0 1113 aa13.17□□□□□ -0.3
GABRB3-208ENST00000555094 GRAPLQ8TC17 118 aaPredicted RBP13.17□□□□□ -0.3
GABRB3-208ENST00000555094 ZNF512BQ96KM6 892 aaPredicted RBP13.17□□□□□ -0.3
GABRB3-208ENST00000555094 USP26Q9BXU7 913 aa13.17□□□□□ -0.3
GABRB3-208ENST00000555094 DIAPH3Q9NSV4 1193 aa13.17□□□□□ -0.3
GABRB3-208ENST00000555094 MINPP1Q9UNW1 487 aa13.17□□□□□ -0.3
GABRB3-208ENST00000555094 CACNA1SQ13698 1873 aa13.17□□□□□ -0.3
GABRB3-208ENST00000555094 SGSM2O43147 1006 aa13.16□□□□□ -0.3
GABRB3-208ENST00000555094 ARID4AP29374 1257 aaPredicted RBP13.16□□□□□ -0.3
GABRB3-208ENST00000555094 PHKA1P46020 1223 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms