RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 MTMR6Q9Y217 621 aa25.32■■□□□ 1.64
ARHGEF40-204ENST00000555038 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.32■■□□□ 1.64
ARHGEF40-204ENST00000555038 ERVV-1B6SEH8 477 aa25.31■■□□□ 1.64
ARHGEF40-204ENST00000555038 CCDC158Q5M9N0 1113 aa25.31■■□□□ 1.64
ARHGEF40-204ENST00000555038 USP48Q86UV5 1035 aa25.31■■□□□ 1.64
ARHGEF40-204ENST00000555038 PPP1R9BQ96SB3 815 aa25.31■■□□□ 1.64
ARHGEF40-204ENST00000555038 ZNF330Q9Y3S2 320 aaPredicted RBP25.31■■□□□ 1.64
ARHGEF40-204ENST00000555038 TOB2Q14106 344 aaPredicted RBP25.31■■□□□ 1.64
ARHGEF40-204ENST00000555038 RBM27Q9P2N5 1060 aaKnown RBP25.31■■□□□ 1.64
ARHGEF40-204ENST00000555038 THRAP3Q9Y2W1 955 aaKnown RBP25.31■■□□□ 1.64
ARHGEF40-204ENST00000555038 IL6STP40189 918 aaPredicted RBP25.3■■□□□ 1.64
ARHGEF40-204ENST00000555038 TAF7LQ5H9L4 462 aa25.3■■□□□ 1.64
ARHGEF40-204ENST00000555038 NLRP10Q86W26 655 aa25.3■■□□□ 1.64
ARHGEF40-204ENST00000555038 PUS3Q9BZE2 481 aaKnown RBP25.3■■□□□ 1.64
ARHGEF40-204ENST00000555038 NDUFB9Q9Y6M9 179 aa25.3■■□□□ 1.64
ARHGEF40-204ENST00000555038 RNF113AO15541 343 aaKnown RBP25.29■■□□□ 1.64
ARHGEF40-204ENST00000555038 ZFYP08048 801 aaPredicted RBP25.29■■□□□ 1.64
ARHGEF40-204ENST00000555038 FAM89AQ96GI7 184 aa25.29■■□□□ 1.64
ARHGEF40-204ENST00000555038 NSFL1CQ9UNZ2 370 aaKnown RBP25.29■■□□□ 1.64
ARHGEF40-204ENST00000555038 CYP21A2P08686 494 aa25.28■■□□□ 1.64
ARHGEF40-204ENST00000555038 UBE2HP62256 183 aa25.28■■□□□ 1.64
ARHGEF40-204ENST00000555038 SEC62Q99442 399 aaKnown RBP25.28■■□□□ 1.64
ARHGEF40-204ENST00000555038 PRIM1P49642 420 aaKnown RBP25.27■■□□□ 1.64
ARHGEF40-204ENST00000555038 CCDC129Q6ZRS4 1044 aa25.27■■□□□ 1.64
ARHGEF40-204ENST00000555038 TRIM44Q96DX7 344 aaPredicted RBP25.27■■□□□ 1.64
ARHGEF40-204ENST00000555038 SLC4A9Q96Q91 983 aa25.27■■□□□ 1.64
ARHGEF40-204ENST00000555038 TAF6LQ9Y6J9 622 aa25.27■■□□□ 1.64
ARHGEF40-204ENST00000555038 TTC39AQ5SRH9 613 aa25.26■■□□□ 1.63
ARHGEF40-204ENST00000555038 NECAB1Q8N987 351 aa25.26■■□□□ 1.63
ARHGEF40-204ENST00000555038 DOT1LQ8TEK3 1739 aa25.26■■□□□ 1.63
ARHGEF40-204ENST00000555038 GORABQ5T7V8 394 aa25.26■■□□□ 1.63
ARHGEF40-204ENST00000555038 LARP1BQ659C4 914 aaKnown RBP25.26■■□□□ 1.63
ARHGEF40-204ENST00000555038 XAGE2Q96GT9 111 aa25.26■■□□□ 1.63
ARHGEF40-204ENST00000555038 AK7Q96M32 723 aa25.26■■□□□ 1.63
ARHGEF40-204ENST00000555038 MYH3P11055 1940 aa25.25■■□□□ 1.63
ARHGEF40-204ENST00000555038 SYCE3A1L190 88 aa25.25■■□□□ 1.63
ARHGEF40-204ENST00000555038 LETM1O95202 739 aaPredicted RBP25.25■■□□□ 1.63
ARHGEF40-204ENST00000555038 CTSWP56202 376 aa25.25■■□□□ 1.63
ARHGEF40-204ENST00000555038 HLFQ16534 295 aa25.25■■□□□ 1.63
ARHGEF40-204ENST00000555038 CNPY2Q9Y2B0 182 aa25.25■■□□□ 1.63
ARHGEF40-204ENST00000555038 ZBTB1Q9Y2K1 713 aa25.25■■□□□ 1.63
ARHGEF40-204ENST00000555038 NRAPQ86VF7 1730 aa25.25■■□□□ 1.63
ARHGEF40-204ENST00000555038 RIC1Q4ADV7 1423 aa25.25■■□□□ 1.63
ARHGEF40-204ENST00000555038 TTLL11Q8NHH1 800 aa25.24■■□□□ 1.63
ARHGEF40-204ENST00000555038 GTF3C6Q969F1 213 aa25.24■■□□□ 1.63
ARHGEF40-204ENST00000555038 ZNF512BQ96KM6 892 aaPredicted RBP25.24■■□□□ 1.63
ARHGEF40-204ENST00000555038 RBSNQ9H1K0 784 aa25.24■■□□□ 1.63
ARHGEF40-204ENST00000555038 CICQ96RK0 1608 aaPredicted RBP25.24■■□□□ 1.63
ARHGEF40-204ENST00000555038 MAST3O60307 1309 aa25.24■■□□□ 1.63
ARHGEF40-204ENST00000555038 TCHHQ07283 1943 aa25.23■■□□□ 1.63
ARHGEF40-204ENST00000555038 ANKRD18BA2A2Z9 1011 aa25.23■■□□□ 1.63
ARHGEF40-204ENST00000555038 CCDC9Q9Y3X0 531 aaKnown RBP25.23■■□□□ 1.63
ARHGEF40-204ENST00000555038 RIPOR2Q9Y4F9 1068 aa25.23■■□□□ 1.63
ARHGEF40-204ENST00000555038 NUP98P52948 1817 aa25.23■■□□□ 1.63
ARHGEF40-204ENST00000555038 GADD45BO75293 160 aaPredicted RBP25.23■■□□□ 1.63
ARHGEF40-204ENST00000555038 DHX32Q7L7V1 743 aaKnown RBP25.23■■□□□ 1.63
ARHGEF40-204ENST00000555038 CHMP4CQ96CF2 233 aa25.23■■□□□ 1.63
ARHGEF40-204ENST00000555038 GDPD2Q9HCC8 539 aa25.23■■□□□ 1.63
ARHGEF40-204ENST00000555038 PDE8AO60658 829 aa25.22■■□□□ 1.63
ARHGEF40-204ENST00000555038 HSPD1P10809 573 aaKnown RBP25.22■■□□□ 1.63
ARHGEF40-204ENST00000555038 CCDC183Q5T5S1 534 aa25.22■■□□□ 1.63
ARHGEF40-204ENST00000555038 SPATA31A1Q5TZJ5 1347 aa25.22■■□□□ 1.63
ARHGEF40-204ENST00000555038 VPS37CA5D8V6 355 aaPredicted RBP25.21■■□□□ 1.63
ARHGEF40-204ENST00000555038 IRS4O14654 1257 aaPredicted RBP25.21■■□□□ 1.63
ARHGEF40-204ENST00000555038 ITGA6P23229 1130 aa25.21■■□□□ 1.63
ARHGEF40-204ENST00000555038 ATP2B3Q16720 1220 aa25.21■■□□□ 1.63
ARHGEF40-204ENST00000555038 FOXD4L6Q3SYB3 417 aaPredicted RBP25.21■■□□□ 1.63
ARHGEF40-204ENST00000555038 FOXD4L3Q6VB84 417 aaPredicted RBP25.21■■□□□ 1.63
ARHGEF40-204ENST00000555038 Q6ZUG5 572 aa25.21■■□□□ 1.63
ARHGEF40-204ENST00000555038 DZIP3Q86Y13 1208 aaKnown RBP25.21■■□□□ 1.63
ARHGEF40-204ENST00000555038 TCEANC2Q96MN5 208 aa25.21■■□□□ 1.63
ARHGEF40-204ENST00000555038 LLPHQ9BRT6 129 aaKnown RBP25.21■■□□□ 1.63
ARHGEF40-204ENST00000555038 CTNNA3Q9UI47 895 aa25.21■■□□□ 1.63
ARHGEF40-204ENST00000555038 CHGBP05060 677 aa25.21■■□□□ 1.63
ARHGEF40-204ENST00000555038 COL9A3Q14050 684 aaPredicted RBP25.21■■□□□ 1.63
ARHGEF40-204ENST00000555038 AGXT2Q9BYV1 514 aa25.21■■□□□ 1.63
ARHGEF40-204ENST00000555038 LRP5O75197 1615 aa25.2■■□□□ 1.62
ARHGEF40-204ENST00000555038 GPTP24298 496 aa25.2■■□□□ 1.62
ARHGEF40-204ENST00000555038 METTL24Q5JXM2 366 aa25.2■■□□□ 1.62
ARHGEF40-204ENST00000555038 LDHAL6AQ6ZMR3 332 aa25.2■■□□□ 1.62
ARHGEF40-204ENST00000555038 ZNF34Q8IZ26 560 aa25.2■■□□□ 1.62
ARHGEF40-204ENST00000555038 CERKQ8TCT0 537 aa25.2■■□□□ 1.62
ARHGEF40-204ENST00000555038 SYTL4Q96C24 671 aaPredicted RBP25.2■■□□□ 1.62
ARHGEF40-204ENST00000555038 TSPY26PQ9H489 355 aa25.2■■□□□ 1.62
ARHGEF40-204ENST00000555038 RRAGDQ9NQL2 400 aaPredicted RBP25.2■■□□□ 1.62
ARHGEF40-204ENST00000555038 TRMT112Q9UI30 125 aaKnown RBP25.2■■□□□ 1.62
ARHGEF40-204ENST00000555038 RREB1Q92766 1687 aa25.2■■□□□ 1.62
ARHGEF40-204ENST00000555038 ADORA1P30542 326 aa25.19■■□□□ 1.62
ARHGEF40-204ENST00000555038 ELP1O95163 1332 aa25.19■■□□□ 1.62
ARHGEF40-204ENST00000555038 KRT85P78386 507 aa25.18■■□□□ 1.62
ARHGEF40-204ENST00000555038 FKBP4Q02790 459 aaKnown RBP eCLIP25.18■■□□□ 1.62
ARHGEF40-204ENST00000555038 DDB1Q16531 1140 aa25.18■■□□□ 1.62
ARHGEF40-204ENST00000555038 FBXL16Q8N461 479 aa25.18■■□□□ 1.62
ARHGEF40-204ENST00000555038 GREM2Q9H772 168 aa25.18■■□□□ 1.62
ARHGEF40-204ENST00000555038 LAMA4Q16363 1823 aa25.18■■□□□ 1.62
ARHGEF40-204ENST00000555038 CLCN1P35523 988 aa25.18■■□□□ 1.62
ARHGEF40-204ENST00000555038 EIF5P55010 431 aaKnown RBP25.18■■□□□ 1.62
ARHGEF40-204ENST00000555038 EXOSC10Q01780 885 aaKnown RBP25.18■■□□□ 1.62
ARHGEF40-204ENST00000555038 DNM1Q05193 864 aaKnown RBP25.18■■□□□ 1.62
ARHGEF40-204ENST00000555038 HS1BP3Q53T59 392 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms