RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 ADCK5Q3MIX3 580 aa18.27■□□□□ 0.52
SYNE3-203ENST00000554873 CCDC83Q8IWF9 413 aa18.27■□□□□ 0.52
SYNE3-203ENST00000554873 KCNQ3O43525 872 aa18.27■□□□□ 0.52
SYNE3-203ENST00000554873 GLRX3O76003 335 aaKnown RBP18.27■□□□□ 0.52
SYNE3-203ENST00000554873 TUBB4AP04350 444 aa18.27■□□□□ 0.52
SYNE3-203ENST00000554873 IVLP07476 585 aa18.27■□□□□ 0.52
SYNE3-203ENST00000554873 HSP90AB4PQ58FF6 505 aa18.27■□□□□ 0.52
SYNE3-203ENST00000554873 DDX19AQ9NUU7 478 aaKnown RBP18.27■□□□□ 0.52
SYNE3-203ENST00000554873 GJB2P29033 226 aa18.27■□□□□ 0.51
SYNE3-203ENST00000554873 ABTB2Q8N961 1025 aa18.27■□□□□ 0.51
SYNE3-203ENST00000554873 TBX22Q9Y458 520 aa18.27■□□□□ 0.51
SYNE3-203ENST00000554873 TTC41PQ6P2S7 1318 aa18.26■□□□□ 0.51
SYNE3-203ENST00000554873 CEBPAP49715 358 aaPredicted RBP18.26■□□□□ 0.51
SYNE3-203ENST00000554873 OS9Q13438 667 aaPredicted RBP18.26■□□□□ 0.51
SYNE3-203ENST00000554873 PDRG1Q9NUG6 133 aa18.26■□□□□ 0.51
SYNE3-203ENST00000554873 CHMP3Q9Y3E7 222 aa18.26■□□□□ 0.51
SYNE3-203ENST00000554873 CEMIPQ8WUJ3 1361 aa18.26■□□□□ 0.51
SYNE3-203ENST00000554873 DIP2AQ14689 1571 aa18.26■□□□□ 0.51
SYNE3-203ENST00000554873 TPM1P09493 284 aa18.26■□□□□ 0.51
SYNE3-203ENST00000554873 PRPF40BQ6NWY9 871 aaKnown RBP18.26■□□□□ 0.51
SYNE3-203ENST00000554873 JAKMIP1Q96N16 626 aaKnown RBP18.26■□□□□ 0.51
SYNE3-203ENST00000554873 DNAJC25Q9H1X3 360 aa18.26■□□□□ 0.51
SYNE3-203ENST00000554873 DACT1Q9NYF0 836 aa18.26■□□□□ 0.51
SYNE3-203ENST00000554873 VPS53Q5VIR6 699 aa18.25■□□□□ 0.51
SYNE3-203ENST00000554873 TTC6Q86TZ1 520 aa18.25■□□□□ 0.51
SYNE3-203ENST00000554873 KCNG1Q9UIX4 513 aa18.25■□□□□ 0.51
SYNE3-203ENST00000554873 GOLGA6L19H0YKK7 550 aa18.25■□□□□ 0.51
SYNE3-203ENST00000554873 TBC1D8O95759 1140 aa18.25■□□□□ 0.51
SYNE3-203ENST00000554873 LMAN1P49257 510 aa18.25■□□□□ 0.51
SYNE3-203ENST00000554873 KRT85P78386 507 aa18.25■□□□□ 0.51
SYNE3-203ENST00000554873 CLSTN2Q9H4D0 955 aa18.25■□□□□ 0.51
SYNE3-203ENST00000554873 ZSWIM6Q9HCJ5 1215 aa18.25■□□□□ 0.51
SYNE3-203ENST00000554873 CCDC91Q7Z6B0 441 aa18.24■□□□□ 0.51
SYNE3-203ENST00000554873 RUFY2Q8WXA3 655 aa18.24■□□□□ 0.51
SYNE3-203ENST00000554873 SASH3O75995 380 aa18.24■□□□□ 0.51
SYNE3-203ENST00000554873 SEC31AO94979 1220 aaKnown RBP18.24■□□□□ 0.51
SYNE3-203ENST00000554873 CLASRPQ8N2M8 674 aaKnown RBP18.24■□□□□ 0.51
SYNE3-203ENST00000554873 DDX54Q8TDD1 881 aaKnown RBP18.24■□□□□ 0.51
SYNE3-203ENST00000554873 ADAM21Q9UKJ8 722 aa18.24■□□□□ 0.51
SYNE3-203ENST00000554873 ST3GAL1Q11201 340 aa18.23■□□□□ 0.51
SYNE3-203ENST00000554873 LEKR1Q6ZMV7 388 aa18.23■□□□□ 0.51
SYNE3-203ENST00000554873 SUGP1Q8IWZ8 645 aaKnown RBP18.23■□□□□ 0.51
SYNE3-203ENST00000554873 KCNB2Q92953 911 aa18.23■□□□□ 0.51
SYNE3-203ENST00000554873 ECHDC1Q9NTX5 307 aa18.23■□□□□ 0.51
SYNE3-203ENST00000554873 ADCY9O60503 1353 aa18.23■□□□□ 0.51
SYNE3-203ENST00000554873 HOXB7P09629 217 aa18.23■□□□□ 0.51
SYNE3-203ENST00000554873 CCDC158Q5M9N0 1113 aa18.23■□□□□ 0.51
SYNE3-203ENST00000554873 TM6SF1Q9BZW5 370 aa18.23■□□□□ 0.51
SYNE3-203ENST00000554873 CYP46A1Q9Y6A2 500 aa18.23■□□□□ 0.51
SYNE3-203ENST00000554873 GSDMDP57764 484 aa18.22■□□□□ 0.51
SYNE3-203ENST00000554873 MTX1Q13505 466 aa18.22■□□□□ 0.51
SYNE3-203ENST00000554873 PPM1EQ8WY54 764 aa18.22■□□□□ 0.51
SYNE3-203ENST00000554873 ZSCAN31Q96LW9 406 aaPredicted RBP18.22■□□□□ 0.51
SYNE3-203ENST00000554873 ME3Q16798 604 aa18.22■□□□□ 0.51
SYNE3-203ENST00000554873 SWT1Q5T5J6 900 aaKnown RBP18.22■□□□□ 0.51
SYNE3-203ENST00000554873 NBPF6Q5VWK0 638 aa18.22■□□□□ 0.51
SYNE3-203ENST00000554873 PPP1R13BQ96KQ4 1090 aa18.22■□□□□ 0.51
SYNE3-203ENST00000554873 NBPF4Q96M43 638 aa18.22■□□□□ 0.51
SYNE3-203ENST00000554873 SRRTQ9BXP5 876 aaKnown RBP18.22■□□□□ 0.51
SYNE3-203ENST00000554873 PA2G4Q9UQ80 394 aaKnown RBP18.22■□□□□ 0.51
SYNE3-203ENST00000554873 USP16Q9Y5T5 823 aa18.22■□□□□ 0.51
SYNE3-203ENST00000554873 SART3Q15020 963 aaKnown RBP18.22■□□□□ 0.51
SYNE3-203ENST00000554873 NECTIN1Q15223 517 aa18.22■□□□□ 0.51
SYNE3-203ENST00000554873 NECAB1Q8N987 351 aa18.22■□□□□ 0.51
SYNE3-203ENST00000554873 SH2B1Q9NRF2 756 aaPredicted RBP18.22■□□□□ 0.51
SYNE3-203ENST00000554873 DONSONQ9NYP3 566 aa18.22■□□□□ 0.51
SYNE3-203ENST00000554873 PSDA5PKW4 1024 aaPredicted RBP18.21■□□□□ 0.51
SYNE3-203ENST00000554873 IQCB1Q15051 598 aa18.21■□□□□ 0.51
SYNE3-203ENST00000554873 E4F1Q66K89 784 aaPredicted RBP18.21■□□□□ 0.51
SYNE3-203ENST00000554873 CC2D1AQ6P1N0 951 aaPredicted RBP18.21■□□□□ 0.51
SYNE3-203ENST00000554873 MARF1Q9Y4F3 1742 aaKnown RBP18.21■□□□□ 0.51
SYNE3-203ENST00000554873 CRYBG1Q9Y4K1 1723 aa18.21■□□□□ 0.51
SYNE3-203ENST00000554873 GOLGA6L4A6NEF3 574 aa18.21■□□□□ 0.51
SYNE3-203ENST00000554873 GSCP56915 257 aaPredicted RBP18.21■□□□□ 0.51
SYNE3-203ENST00000554873 C14orf37Q86TY3 774 aa18.21■□□□□ 0.51
SYNE3-203ENST00000554873 MNS1Q8NEH6 495 aa18.21■□□□□ 0.51
SYNE3-203ENST00000554873 VPS37CA5D8V6 355 aaPredicted RBP18.2■□□□□ 0.5
SYNE3-203ENST00000554873 EFCAB8A8MWE9 144 aa18.2■□□□□ 0.5
SYNE3-203ENST00000554873 EIF3CLB5ME19 914 aaKnown RBP18.2■□□□□ 0.5
SYNE3-203ENST00000554873 TADA3O75528 432 aa18.2■□□□□ 0.5
SYNE3-203ENST00000554873 EP400NLQ6ZTU2 488 aa18.2■□□□□ 0.5
SYNE3-203ENST00000554873 EIF3CQ99613 913 aaKnown RBP18.2■□□□□ 0.5
SYNE3-203ENST00000554873 CXorf56Q9H5V9 222 aa18.2■□□□□ 0.5
SYNE3-203ENST00000554873 IFIT2P09913 472 aaKnown RBP18.2■□□□□ 0.5
SYNE3-203ENST00000554873 CARD10Q9BWT7 1032 aa18.2■□□□□ 0.5
SYNE3-203ENST00000554873 C9orf78Q9NZ63 289 aaPredicted RBP18.19■□□□□ 0.5
SYNE3-203ENST00000554873 BTBD11A6QL63 1104 aa18.19■□□□□ 0.5
SYNE3-203ENST00000554873 RPS6KA5O75582 802 aa18.19■□□□□ 0.5
SYNE3-203ENST00000554873 COL9A3Q14050 684 aaPredicted RBP18.19■□□□□ 0.5
SYNE3-203ENST00000554873 MCTP2Q6DN12 878 aa18.19■□□□□ 0.5
SYNE3-203ENST00000554873 EVI5LQ96CN4 794 aa18.19■□□□□ 0.5
SYNE3-203ENST00000554873 CCDC34Q96HJ3 373 aa18.19■□□□□ 0.5
SYNE3-203ENST00000554873 TPCN1Q9ULQ1 816 aa18.19■□□□□ 0.5
SYNE3-203ENST00000554873 MAP3K2Q9Y2U5 619 aa18.19■□□□□ 0.5
SYNE3-203ENST00000554873 NPHP3Q7Z494 1330 aa18.19■□□□□ 0.5
SYNE3-203ENST00000554873 GORABQ5T7V8 394 aa18.18■□□□□ 0.5
SYNE3-203ENST00000554873 CREB3L3Q68CJ9 461 aa18.18■□□□□ 0.5
SYNE3-203ENST00000554873 IP6K1Q92551 441 aa18.18■□□□□ 0.5
SYNE3-203ENST00000554873 RBM8AQ9Y5S9 174 aaKnown RBP18.18■□□□□ 0.5
SYNE3-203ENST00000554873 SETD1BQ9UPS6 1966 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms