RNA–Protein interactions for RNA: ENST00000554624.5

PSMC1-204, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

TSL 2

Gene PSMC1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-204ENST00000554624 VPS9D1Q9Y2B5 631 aa13.13□□□□□ -0.31
PSMC1-204ENST00000554624 RRP7AQ9Y3A4 280 aaKnown RBP13.13□□□□□ -0.31
PSMC1-204ENST00000554624 FAM177BA6PVY3 158 aa13.12□□□□□ -0.31
PSMC1-204ENST00000554624 LDHDQ86WU2 507 aa13.12□□□□□ -0.31
PSMC1-204ENST00000554624 NGEFQ8N5V2 710 aa13.12□□□□□ -0.31
PSMC1-204ENST00000554624 BABAM1Q9NWV8 329 aa13.12□□□□□ -0.31
PSMC1-204ENST00000554624 MAP3K15Q6ZN16 1313 aa13.12□□□□□ -0.31
PSMC1-204ENST00000554624 TNRC6CQ9HCJ0 1690 aaKnown RBP13.12□□□□□ -0.31
PSMC1-204ENST00000554624 HOXA10P31260 410 aaPredicted RBP13.11□□□□□ -0.31
PSMC1-204ENST00000554624 CRY2Q49AN0 593 aa13.11□□□□□ -0.31
PSMC1-204ENST00000554624 COL13A1Q5TAT6 717 aaPredicted RBP13.11□□□□□ -0.31
PSMC1-204ENST00000554624 SYNE4Q8N205 404 aa13.11□□□□□ -0.31
PSMC1-204ENST00000554624 TAF1DQ9H5J8 278 aaPredicted RBP13.11□□□□□ -0.31
PSMC1-204ENST00000554624 MAPK8IP3Q9UPT6 1336 aa13.11□□□□□ -0.31
PSMC1-204ENST00000554624 PCNTO95613 3336 aa13.1□□□□□ -0.31
PSMC1-204ENST00000554624 SIPA1L3O60292 1781 aaPredicted RBP13.1□□□□□ -0.31
PSMC1-204ENST00000554624 PNMA8AQ86V59 439 aaPredicted RBP13.1□□□□□ -0.31
PSMC1-204ENST00000554624 JDP2Q8WYK2 163 aa13.1□□□□□ -0.31
PSMC1-204ENST00000554624 RPGRQ92834 1020 aaKnown RBP13.1□□□□□ -0.31
PSMC1-204ENST00000554624 PSMD1Q99460 953 aa13.1□□□□□ -0.31
PSMC1-204ENST00000554624 ZNF277Q9NRM2 450 aaPredicted RBP13.1□□□□□ -0.31
PSMC1-204ENST00000554624 KIAA1468Q9P260 1216 aa13.1□□□□□ -0.31
PSMC1-204ENST00000554624 ERBB4Q15303 1308 aa13.1□□□□□ -0.31
PSMC1-204ENST00000554624 DLEC1Q9Y238 1755 aa13.09□□□□□ -0.31
PSMC1-204ENST00000554624 FZD9O00144 591 aa13.09□□□□□ -0.31
PSMC1-204ENST00000554624 TRIM66O15016 1216 aa13.09□□□□□ -0.31
PSMC1-204ENST00000554624 MYL6BP14649 208 aa13.09□□□□□ -0.31
PSMC1-204ENST00000554624 IARSP41252 1262 aaKnown RBP13.09□□□□□ -0.31
PSMC1-204ENST00000554624 PPP1R42Q7Z4L9 355 aa13.09□□□□□ -0.31
PSMC1-204ENST00000554624 METTL3Q86U44 580 aaKnown RBP13.09□□□□□ -0.31
PSMC1-204ENST00000554624 ZNF34Q8IZ26 560 aa13.09□□□□□ -0.31
PSMC1-204ENST00000554624 TATDN2Q93075 761 aa13.09□□□□□ -0.31
PSMC1-204ENST00000554624 WDR90Q96KV7 1748 aa13.09□□□□□ -0.31
PSMC1-204ENST00000554624 TMX4Q9H1E5 349 aaPredicted RBP13.09□□□□□ -0.31
PSMC1-204ENST00000554624 HACL1Q9UJ83 578 aa13.09□□□□□ -0.31
PSMC1-204ENST00000554624 VIRMAQ69YN4 1812 aaKnown RBP13.09□□□□□ -0.31
PSMC1-204ENST00000554624 RALBP1Q15311 655 aa13.08□□□□□ -0.32
PSMC1-204ENST00000554624 PARP10Q53GL7 1025 aa13.08□□□□□ -0.32
PSMC1-204ENST00000554624 ADGRD1Q6QNK2 874 aa13.08□□□□□ -0.32
PSMC1-204ENST00000554624 GIGYF2Q6Y7W6 1299 aaKnown RBP13.08□□□□□ -0.32
PSMC1-204ENST00000554624 TTLL7Q6ZT98 887 aa13.08□□□□□ -0.32
PSMC1-204ENST00000554624 GPC2Q8N158 579 aa13.08□□□□□ -0.32
PSMC1-204ENST00000554624 PXYLP1Q8TE99 480 aa13.08□□□□□ -0.32
PSMC1-204ENST00000554624 RBM17Q96I25 401 aaKnown RBP13.08□□□□□ -0.32
PSMC1-204ENST00000554624 CRAMP1Q96RY5 1269 aa13.08□□□□□ -0.32
PSMC1-204ENST00000554624 SCN7AQ01118 1682 aa13.08□□□□□ -0.32
PSMC1-204ENST00000554624 HSPA1AP0DMV8 641 aaKnown RBP13.07□□□□□ -0.32
PSMC1-204ENST00000554624 HSPA1BP0DMV9 641 aaKnown RBP13.07□□□□□ -0.32
PSMC1-204ENST00000554624 EPHX2P34913 555 aa13.07□□□□□ -0.32
PSMC1-204ENST00000554624 RIPK4P57078 832 aa13.07□□□□□ -0.32
PSMC1-204ENST00000554624 LMOD3Q0VAK6 560 aa13.07□□□□□ -0.32
PSMC1-204ENST00000554624 AMHR2Q16671 573 aa13.07□□□□□ -0.32
PSMC1-204ENST00000554624 SLC10A5Q5PT55 438 aa13.07□□□□□ -0.32
PSMC1-204ENST00000554624 SUSD4Q5VX71 490 aa13.07□□□□□ -0.32
PSMC1-204ENST00000554624 NUDT18Q6ZVK8 323 aa13.07□□□□□ -0.32
PSMC1-204ENST00000554624 NUTM1Q86Y26 1132 aa13.07□□□□□ -0.32
PSMC1-204ENST00000554624 TNS4Q8IZW8 715 aa13.07□□□□□ -0.32
PSMC1-204ENST00000554624 NLRP3Q96P20 1036 aa13.07□□□□□ -0.32
PSMC1-204ENST00000554624 THUMPD2Q9BTF0 503 aaKnown RBP13.07□□□□□ -0.32
PSMC1-204ENST00000554624 NBPF3Q9H094 633 aa13.07□□□□□ -0.32
PSMC1-204ENST00000554624 VPS33BQ9H267 617 aa13.07□□□□□ -0.32
PSMC1-204ENST00000554624 TSPYL4Q9UJ04 414 aa13.07□□□□□ -0.32
PSMC1-204ENST00000554624 PNMA3Q9UL41 463 aa13.07□□□□□ -0.32
PSMC1-204ENST00000554624 ANKRD31Q8N7Z5 1873 aa13.06□□□□□ -0.32
PSMC1-204ENST00000554624 TMEM88BA6NKF7 163 aa13.06□□□□□ -0.32
PSMC1-204ENST00000554624 ITGBL1O95965 494 aaPredicted RBP13.06□□□□□ -0.32
PSMC1-204ENST00000554624 GPTP24298 496 aa13.06□□□□□ -0.32
PSMC1-204ENST00000554624 EIF6P56537 245 aaKnown RBP13.06□□□□□ -0.32
PSMC1-204ENST00000554624 EAPPQ56P03 285 aaPredicted RBP13.06□□□□□ -0.32
PSMC1-204ENST00000554624 OLFM4Q6UX06 510 aa13.06□□□□□ -0.32
PSMC1-204ENST00000554624 CDAN1Q8IWY9 1227 aa13.06□□□□□ -0.32
PSMC1-204ENST00000554624 KRTAP3-3Q9BYR6 98 aa13.06□□□□□ -0.32
PSMC1-204ENST00000554624 KRTAP3-2Q9BYR7 98 aa13.06□□□□□ -0.32
PSMC1-204ENST00000554624 ZBTB3Q9H5J0 574 aa13.06□□□□□ -0.32
PSMC1-204ENST00000554624 SLX4Q8IY92 1834 aa13.06□□□□□ -0.32
PSMC1-204ENST00000554624 IBTKQ9P2D0 1353 aaPredicted RBP13.06□□□□□ -0.32
PSMC1-204ENST00000554624 BHMG1C9JSJ3 638 aaPredicted RBP13.05□□□□□ -0.32
PSMC1-204ENST00000554624 LAPTM4BQ86VI4 370 aa13.05□□□□□ -0.32
PSMC1-204ENST00000554624 UTP14AQ9BVJ6 771 aaKnown RBP13.05□□□□□ -0.32
PSMC1-204ENST00000554624 PCDH10Q9P2E7 1040 aa13.05□□□□□ -0.32
PSMC1-204ENST00000554624 FER1L6Q2WGJ9 1857 aa13.05□□□□□ -0.32
PSMC1-204ENST00000554624 PASKQ96RG2 1323 aa13.05□□□□□ -0.32
PSMC1-204ENST00000554624 BBOX1O75936 387 aa13.04□□□□□ -0.32
PSMC1-204ENST00000554624 EIF2S2P20042 333 aaKnown RBP13.04□□□□□ -0.32
PSMC1-204ENST00000554624 HSP90AB3PQ58FF7 597 aa13.04□□□□□ -0.32
PSMC1-204ENST00000554624 CNTROBQ8N137 903 aa13.04□□□□□ -0.32
PSMC1-204ENST00000554624 MKRN1Q9UHC7 482 aaKnown RBP13.04□□□□□ -0.32
PSMC1-204ENST00000554624 ZNF541Q9H0D2 1346 aa13.04□□□□□ -0.32
PSMC1-204ENST00000554624 HRO43593 1189 aa13.03□□□□□ -0.32
PSMC1-204ENST00000554624 NTSR2O95665 410 aa13.03□□□□□ -0.32
PSMC1-204ENST00000554624 LMOD1P29536 600 aaPredicted RBP13.03□□□□□ -0.32
PSMC1-204ENST00000554624 TMPOP42166 694 aaKnown RBP13.03□□□□□ -0.32
PSMC1-204ENST00000554624 FAM161AQ3B820 660 aa13.03□□□□□ -0.32
PSMC1-204ENST00000554624 ANKRD13DQ6ZTN6 518 aa13.03□□□□□ -0.32
PSMC1-204ENST00000554624 LARGE2Q8N3Y3 721 aa13.03□□□□□ -0.32
PSMC1-204ENST00000554624 RNF123Q5XPI4 1314 aa13.03□□□□□ -0.32
PSMC1-204ENST00000554624 UBN2Q6ZU65 1347 aa13.03□□□□□ -0.32
PSMC1-204ENST00000554624 RIC1Q4ADV7 1423 aa13.03□□□□□ -0.32
PSMC1-204ENST00000554624 PPEF1O14829 653 aaPredicted RBP13.02□□□□□ -0.33
PSMC1-204ENST00000554624 PDE4DQ08499 809 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms