RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 ASB16Q96NS5 453 aa9.01□□□□□ -0.97
SCFD1-211ENST00000554437 MDFIQ99750 246 aa9.01□□□□□ -0.97
SCFD1-211ENST00000554437 CPB1P15086 417 aa9□□□□□ -0.97
SCFD1-211ENST00000554437 FAM35AQ86V20 835 aa9□□□□□ -0.97
SCFD1-211ENST00000554437 PMEPA1Q969W9 287 aa9□□□□□ -0.97
SCFD1-211ENST00000554437 KANSL3Q9P2N6 904 aa9□□□□□ -0.97
SCFD1-211ENST00000554437 LOC102724428A0A0B4J2F2 783 aa8.99□□□□□ -0.97
SCFD1-211ENST00000554437 J3QW42 95 aa8.99□□□□□ -0.97
SCFD1-211ENST00000554437 ARHGEF15O94989 841 aa8.99□□□□□ -0.97
SCFD1-211ENST00000554437 IGHA2P01877 340 aa8.99□□□□□ -0.97
SCFD1-211ENST00000554437 SIK1P57059 783 aa8.99□□□□□ -0.97
SCFD1-211ENST00000554437 PLCB3Q01970 1234 aa8.99□□□□□ -0.97
SCFD1-211ENST00000554437 HYAL2Q12891 473 aa8.99□□□□□ -0.97
SCFD1-211ENST00000554437 CHSY3Q70JA7 882 aa8.99□□□□□ -0.97
SCFD1-211ENST00000554437 CHRDQ9H2X0 955 aa8.99□□□□□ -0.97
SCFD1-211ENST00000554437 HOXD8P13378 290 aaPredicted RBP8.98□□□□□ -0.97
SCFD1-211ENST00000554437 ORC1Q13415 861 aa8.98□□□□□ -0.97
SCFD1-211ENST00000554437 COL13A1Q5TAT6 717 aaPredicted RBP8.98□□□□□ -0.97
SCFD1-211ENST00000554437 NCAPG2Q86XI2 1143 aa8.98□□□□□ -0.97
SCFD1-211ENST00000554437 SPACA7Q96KW9 195 aa8.98□□□□□ -0.97
SCFD1-211ENST00000554437 RRAGCQ9HB90 399 aa8.98□□□□□ -0.97
SCFD1-211ENST00000554437 ZFYVE28Q9HCC9 887 aa8.98□□□□□ -0.97
SCFD1-211ENST00000554437 EREGO14944 169 aa8.97□□□□□ -0.97
SCFD1-211ENST00000554437 GHRHP01286 108 aa8.97□□□□□ -0.97
SCFD1-211ENST00000554437 EIF2AK2P19525 551 aaKnown RBP8.97□□□□□ -0.97
SCFD1-211ENST00000554437 ALKBH8Q96BT7 664 aaKnown RBP8.97□□□□□ -0.97
SCFD1-211ENST00000554437 RBSNQ9H1K0 784 aa8.97□□□□□ -0.97
SCFD1-211ENST00000554437 NAGPAQ9UK23 515 aa8.97□□□□□ -0.97
SCFD1-211ENST00000554437 ADAMTS8Q9UP79 889 aa8.97□□□□□ -0.97
SCFD1-211ENST00000554437 TREHO43280 583 aa8.96□□□□□ -0.98
SCFD1-211ENST00000554437 CPNE3O75131 537 aaKnown RBP8.96□□□□□ -0.98
SCFD1-211ENST00000554437 GPAT2Q6NUI2 795 aa8.96□□□□□ -0.98
SCFD1-211ENST00000554437 PSAPL1Q6NUJ1 521 aa8.96□□□□□ -0.98
SCFD1-211ENST00000554437 ELMSAN1Q6PJG2 1045 aa8.96□□□□□ -0.98
SCFD1-211ENST00000554437 AMOTL2Q9Y2J4 779 aa8.96□□□□□ -0.98
SCFD1-211ENST00000554437 STARD13Q9Y3M8 1113 aa8.96□□□□□ -0.98
SCFD1-211ENST00000554437 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.96□□□□□ -0.98
SCFD1-211ENST00000554437 ANKRD33BA6NCL7 494 aa8.95□□□□□ -0.98
SCFD1-211ENST00000554437 EIF1AYO14602 144 aaKnown RBP8.95□□□□□ -0.98
SCFD1-211ENST00000554437 POLR3DP05423 398 aaPredicted RBP8.95□□□□□ -0.98
SCFD1-211ENST00000554437 DSC3Q14574 896 aa8.95□□□□□ -0.98
SCFD1-211ENST00000554437 PERM1Q5SV97 790 aa8.95□□□□□ -0.98
SCFD1-211ENST00000554437 KANK3Q6NY19 840 aa8.95□□□□□ -0.98
SCFD1-211ENST00000554437 MICALL1Q8N3F8 863 aa8.95□□□□□ -0.98
SCFD1-211ENST00000554437 NUDT8Q8WV74 236 aa8.95□□□□□ -0.98
SCFD1-211ENST00000554437 CSRNP1Q96S65 589 aa8.95□□□□□ -0.98
SCFD1-211ENST00000554437 SALL4Q9UJQ4 1053 aa8.95□□□□□ -0.98
SCFD1-211ENST00000554437 M0R082 166 aa8.94□□□□□ -0.98
SCFD1-211ENST00000554437 RGS9O75916 674 aaPredicted RBP8.94□□□□□ -0.98
SCFD1-211ENST00000554437 KIF4AO95239 1232 aa8.94□□□□□ -0.98
SCFD1-211ENST00000554437 ALBP02768 609 aa8.94□□□□□ -0.98
SCFD1-211ENST00000554437 MAPK8P45983 427 aa8.94□□□□□ -0.98
SCFD1-211ENST00000554437 USPL1Q5W0Q7 1092 aa8.94□□□□□ -0.98
SCFD1-211ENST00000554437 DNAJC14Q6Y2X3 702 aaPredicted RBP8.94□□□□□ -0.98
SCFD1-211ENST00000554437 ZNF417Q8TAU3 575 aa8.94□□□□□ -0.98
SCFD1-211ENST00000554437 ZNF587Q96SQ5 575 aaPredicted RBP8.94□□□□□ -0.98
SCFD1-211ENST00000554437 KRTAP4-8Q9BYQ9 185 aa8.94□□□□□ -0.98
SCFD1-211ENST00000554437 SMG9Q9H0W8 520 aaKnown RBP8.94□□□□□ -0.98
SCFD1-211ENST00000554437 DNAJC25Q9H1X3 360 aa8.94□□□□□ -0.98
SCFD1-211ENST00000554437 EDN3P14138 238 aa8.93□□□□□ -0.98
SCFD1-211ENST00000554437 MFAP1P55081 439 aaKnown RBP8.93□□□□□ -0.98
SCFD1-211ENST00000554437 CEP120Q8N960 986 aa8.93□□□□□ -0.98
SCFD1-211ENST00000554437 PLD4Q96BZ4 506 aa8.93□□□□□ -0.98
SCFD1-211ENST00000554437 LPIN3Q9BQK8 851 aa8.93□□□□□ -0.98
SCFD1-211ENST00000554437 JPH1Q9HDC5 661 aaPredicted RBP8.93□□□□□ -0.98
SCFD1-211ENST00000554437 FRRS1LQ9P0K9 344 aa8.93□□□□□ -0.98
SCFD1-211ENST00000554437 FMR1Q06787 632 aaKnown RBP eCLIP8.92□□□□□ -0.98
SCFD1-211ENST00000554437 C20orf204Q6ZNR8 217 aa8.92□□□□□ -0.98
SCFD1-211ENST00000554437 C8orf86Q6ZUL3 223 aa8.92□□□□□ -0.98
SCFD1-211ENST00000554437 PNMA6FA0A0J9YX94 578 aa8.91□□□□□ -0.98
SCFD1-211ENST00000554437 RNF225M0QZC1 329 aaPredicted RBP8.91□□□□□ -0.98
SCFD1-211ENST00000554437 LILRB5O75023 590 aa8.91□□□□□ -0.98
SCFD1-211ENST00000554437 SNRPNP63162 240 aaKnown RBP8.91□□□□□ -0.98
SCFD1-211ENST00000554437 ATP11AP98196 1134 aa8.91□□□□□ -0.98
SCFD1-211ENST00000554437 RASSF4Q9H2L5 321 aa8.91□□□□□ -0.98
SCFD1-211ENST00000554437 SMNDC1O75940 238 aaKnown RBP eCLIP8.9□□□□□ -0.98
SCFD1-211ENST00000554437 P4HBP07237 508 aaKnown RBP8.9□□□□□ -0.98
SCFD1-211ENST00000554437 ACPPP15309 386 aa8.9□□□□□ -0.98
SCFD1-211ENST00000554437 ERCC3P19447 782 aa8.9□□□□□ -0.98
SCFD1-211ENST00000554437 DGKGP49619 791 aa8.9□□□□□ -0.98
SCFD1-211ENST00000554437 ENOX2Q16206 610 aaKnown RBP8.9□□□□□ -0.98
SCFD1-211ENST00000554437 CEP135Q66GS9 1140 aa8.9□□□□□ -0.98
SCFD1-211ENST00000554437 GALNT12Q8IXK2 581 aa8.9□□□□□ -0.98
SCFD1-211ENST00000554437 CCDC74AQ96AQ1 378 aa8.9□□□□□ -0.98
SCFD1-211ENST00000554437 PBX4Q9BYU1 374 aa8.9□□□□□ -0.98
SCFD1-211ENST00000554437 LATS2Q9NRM7 1088 aa8.9□□□□□ -0.98
SCFD1-211ENST00000554437 TRPA1O75762 1119 aa8.89□□□□□ -0.99
SCFD1-211ENST00000554437 HOXB4P17483 251 aaPredicted RBP8.89□□□□□ -0.99
SCFD1-211ENST00000554437 PODNQ7Z5L7 613 aa8.89□□□□□ -0.99
SCFD1-211ENST00000554437 NPAS4Q8IUM7 802 aa8.89□□□□□ -0.99
SCFD1-211ENST00000554437 TTC9Q92623 222 aa8.89□□□□□ -0.99
SCFD1-211ENST00000554437 OSMRQ99650 979 aa8.89□□□□□ -0.99
SCFD1-211ENST00000554437 DZANK1Q9NVP4 752 aa8.89□□□□□ -0.99
SCFD1-211ENST00000554437 IGHA1P01876 353 aa8.88□□□□□ -0.99
SCFD1-211ENST00000554437 AFF1P51825 1210 aaKnown RBP8.88□□□□□ -0.99
SCFD1-211ENST00000554437 ATP2B2Q01814 1243 aa8.88□□□□□ -0.99
SCFD1-211ENST00000554437 EAPPQ56P03 285 aaPredicted RBP8.88□□□□□ -0.99
SCFD1-211ENST00000554437 PEAR1Q5VY43 1037 aaPredicted RBP8.88□□□□□ -0.99
SCFD1-211ENST00000554437 GDF6Q6KF10 455 aaPredicted RBP8.88□□□□□ -0.99
SCFD1-211ENST00000554437 BEND7Q8N7W2 519 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms