RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 RPS12P25398 132 aaKnown RBP24.09■■□□□ 1.45
CPSF2-203ENST00000554290 HIRAP54198 1017 aaPredicted RBP24.09■■□□□ 1.45
CPSF2-203ENST00000554290 MAP2K1Q02750 393 aaPredicted RBP24.09■■□□□ 1.45
CPSF2-203ENST00000554290 DOK7Q18PE1 504 aa24.09■■□□□ 1.45
CPSF2-203ENST00000554290 DCAF8Q5TAQ9 597 aa24.09■■□□□ 1.45
CPSF2-203ENST00000554290 PAXIP1Q6ZW49 1069 aaPredicted RBP24.09■■□□□ 1.45
CPSF2-203ENST00000554290 MICALL2Q8IY33 904 aa24.09■■□□□ 1.45
CPSF2-203ENST00000554290 ZBTB12Q9Y330 459 aaPredicted RBP24.09■■□□□ 1.45
CPSF2-203ENST00000554290 UFL1O94874 794 aa24.08■■□□□ 1.45
CPSF2-203ENST00000554290 CDC37L1Q7L3B6 337 aa24.08■■□□□ 1.45
CPSF2-203ENST00000554290 ANKRD18AQ8IVF6 992 aa24.08■■□□□ 1.45
CPSF2-203ENST00000554290 TRPM4Q8TD43 1214 aa24.08■■□□□ 1.45
CPSF2-203ENST00000554290 GLIS2Q9BZE0 524 aaPredicted RBP24.08■■□□□ 1.45
CPSF2-203ENST00000554290 PRDM10Q9NQV6 1147 aa24.08■■□□□ 1.45
CPSF2-203ENST00000554290 GGA1Q9UJY5 639 aa24.08■■□□□ 1.45
CPSF2-203ENST00000554290 TLL2Q9Y6L7 1015 aa24.08■■□□□ 1.45
CPSF2-203ENST00000554290 CAPNS2Q96L46 248 aa24.07■■□□□ 1.44
CPSF2-203ENST00000554290 CCDC85AQ96PX6 553 aaPredicted RBP24.07■■□□□ 1.44
CPSF2-203ENST00000554290 COL4A1P02462 1669 aa24.06■■□□□ 1.44
CPSF2-203ENST00000554290 CAPN15O75808 1086 aa24.06■■□□□ 1.44
CPSF2-203ENST00000554290 CELF2O95319 508 aaKnown RBP24.06■■□□□ 1.44
CPSF2-203ENST00000554290 SLC4A2P04920 1241 aa24.06■■□□□ 1.44
CPSF2-203ENST00000554290 IGKV5-2P06315 115 aa24.06■■□□□ 1.44
CPSF2-203ENST00000554290 GPR101Q96P66 508 aaPredicted RBP24.06■■□□□ 1.44
CPSF2-203ENST00000554290 SHTN1A0MZ66 631 aa24.05■■□□□ 1.44
CPSF2-203ENST00000554290 CDC5LQ99459 802 aaKnown RBP24.05■■□□□ 1.44
CPSF2-203ENST00000554290 ZNF316A6NFI3 1004 aaPredicted RBP24.04■■□□□ 1.44
CPSF2-203ENST00000554290 CTSWP56202 376 aa24.04■■□□□ 1.44
CPSF2-203ENST00000554290 GRM1Q13255 1194 aa24.04■■□□□ 1.44
CPSF2-203ENST00000554290 CYP4F22Q6NT55 531 aa24.04■■□□□ 1.44
CPSF2-203ENST00000554290 KCNQ5Q9NR82 932 aa24.04■■□□□ 1.44
CPSF2-203ENST00000554290 CWF19L2Q2TBE0 894 aaKnown RBP24.03■■□□□ 1.44
CPSF2-203ENST00000554290 G2E3Q7L622 706 aa24.03■■□□□ 1.44
CPSF2-203ENST00000554290 SAMD7Q7Z3H4 446 aa24.03■■□□□ 1.44
CPSF2-203ENST00000554290 XDHP47989 1333 aa24.03■■□□□ 1.44
CPSF2-203ENST00000554290 RTL9Q8NET4 1388 aa24.03■■□□□ 1.44
CPSF2-203ENST00000554290 NEURL1BA8MQ27 555 aa24.02■■□□□ 1.44
CPSF2-203ENST00000554290 VIL1P09327 827 aaKnown RBP24.02■■□□□ 1.44
CPSF2-203ENST00000554290 TBC1D10BQ4KMP7 808 aaPredicted RBP24.02■■□□□ 1.44
CPSF2-203ENST00000554290 SAPCD2Q86UD0 394 aa24.02■■□□□ 1.44
CPSF2-203ENST00000554290 WDR63Q8IWG1 891 aa24.02■■□□□ 1.44
CPSF2-203ENST00000554290 TTLL11Q8NHH1 800 aa24.02■■□□□ 1.44
CPSF2-203ENST00000554290 BEGAINQ9BUH8 593 aa24.02■■□□□ 1.44
CPSF2-203ENST00000554290 ZNF408Q9H9D4 720 aa24.02■■□□□ 1.44
CPSF2-203ENST00000554290 TRPM7Q96QT4 1865 aa24.02■■□□□ 1.44
CPSF2-203ENST00000554290 ATP2B4P23634 1241 aa24.01■■□□□ 1.43
CPSF2-203ENST00000554290 LBX1P52954 281 aa24.01■■□□□ 1.43
CPSF2-203ENST00000554290 RBM26Q5T8P6 1007 aaKnown RBP24.01■■□□□ 1.43
CPSF2-203ENST00000554290 USP48Q86UV5 1035 aa24.01■■□□□ 1.43
CPSF2-203ENST00000554290 HHIPL1Q96JK4 782 aa24.01■■□□□ 1.43
CPSF2-203ENST00000554290 H7C1W4 665 aa24■■□□□ 1.43
CPSF2-203ENST00000554290 MAP2K2P36507 400 aa24■■□□□ 1.43
CPSF2-203ENST00000554290 FLIIQ13045 1269 aa24■■□□□ 1.43
CPSF2-203ENST00000554290 UBE3BQ7Z3V4 1068 aa24■■□□□ 1.43
CPSF2-203ENST00000554290 DCPSQ96C86 337 aaKnown RBP24■■□□□ 1.43
CPSF2-203ENST00000554290 FANCIQ9NVI1 1328 aa24■■□□□ 1.43
CPSF2-203ENST00000554290 KRT26Q7Z3Y9 468 aa23.99■■□□□ 1.43
CPSF2-203ENST00000554290 GREM2Q9H772 168 aa23.99■■□□□ 1.43
CPSF2-203ENST00000554290 BSDC1Q9NW68 430 aaPredicted RBP23.99■■□□□ 1.43
CPSF2-203ENST00000554290 SALL2Q9Y467 1007 aaPredicted RBP23.99■■□□□ 1.43
CPSF2-203ENST00000554290 FKBP5Q13451 457 aaPredicted RBP23.98■■□□□ 1.43
CPSF2-203ENST00000554290 MYH16Q9H6N6 1097 aa23.98■■□□□ 1.43
CPSF2-203ENST00000554290 EGFRP00533 1210 aa23.97■■□□□ 1.43
CPSF2-203ENST00000554290 HSPA8P11142 646 aaKnown RBP23.97■■□□□ 1.43
CPSF2-203ENST00000554290 GCKRQ14397 625 aa23.97■■□□□ 1.43
CPSF2-203ENST00000554290 PODNQ7Z5L7 613 aa23.97■■□□□ 1.43
CPSF2-203ENST00000554290 AGBL3Q8NEM8 1001 aa23.97■■□□□ 1.43
CPSF2-203ENST00000554290 MINPP1Q9UNW1 487 aa23.97■■□□□ 1.43
CPSF2-203ENST00000554290 KIF4BQ2VIQ3 1234 aa23.96■■□□□ 1.43
CPSF2-203ENST00000554290 RSBN1LQ6PCB5 846 aaPredicted RBP23.96■■□□□ 1.43
CPSF2-203ENST00000554290 LINS1Q8NG48 757 aa23.96■■□□□ 1.43
CPSF2-203ENST00000554290 DNAAF4Q8WXU2 420 aa23.96■■□□□ 1.43
CPSF2-203ENST00000554290 AOC2O75106 756 aa23.95■■□□□ 1.42
CPSF2-203ENST00000554290 VAMP4O75379 141 aa23.95■■□□□ 1.42
CPSF2-203ENST00000554290 IGHMBP2P38935 993 aaKnown RBP23.95■■□□□ 1.42
CPSF2-203ENST00000554290 EXOSC9Q06265 439 aaKnown RBP23.94■■□□□ 1.42
CPSF2-203ENST00000554290 PLA2G12BQ9BX93 195 aa23.94■■□□□ 1.42
CPSF2-203ENST00000554290 THSD7BQ9C0I4 1608 aa23.93■■□□□ 1.42
CPSF2-203ENST00000554290 USP17L3A6NCW0 530 aa23.93■■□□□ 1.42
CPSF2-203ENST00000554290 USP17L4A6NCW7 530 aa23.93■■□□□ 1.42
CPSF2-203ENST00000554290 CCT4P50991 539 aaKnown RBP23.93■■□□□ 1.42
CPSF2-203ENST00000554290 ZNF280AP59817 542 aaPredicted RBP23.93■■□□□ 1.42
CPSF2-203ENST00000554290 USP17L1Q7RTZ2 530 aa23.93■■□□□ 1.42
CPSF2-203ENST00000554290 SULF1Q8IWU6 871 aa23.93■■□□□ 1.42
CPSF2-203ENST00000554290 C2orf69Q8N8R5 385 aa23.93■■□□□ 1.42
CPSF2-203ENST00000554290 ZNF609O15014 1411 aa23.93■■□□□ 1.42
CPSF2-203ENST00000554290 MED23Q9ULK4 1368 aa23.92■■□□□ 1.42
CPSF2-203ENST00000554290 HUNKP57058 714 aa23.92■■□□□ 1.42
CPSF2-203ENST00000554290 GGA3Q9NZ52 723 aa23.92■■□□□ 1.42
CPSF2-203ENST00000554290 CA12O43570 354 aa23.91■■□□□ 1.42
CPSF2-203ENST00000554290 USP17L8P0C7I0 530 aa23.91■■□□□ 1.42
CPSF2-203ENST00000554290 ITGA6P23229 1130 aa23.91■■□□□ 1.42
CPSF2-203ENST00000554290 DLK2Q6UY11 383 aa23.91■■□□□ 1.42
CPSF2-203ENST00000554290 GMLQ99445 158 aa23.91■■□□□ 1.42
CPSF2-203ENST00000554290 MPHOSPH8Q99549 860 aa23.91■■□□□ 1.42
CPSF2-203ENST00000554290 ANKRD2Q9GZV1 360 aa23.91■■□□□ 1.42
CPSF2-203ENST00000554290 GBA2Q9HCG7 927 aaPredicted RBP23.91■■□□□ 1.42
CPSF2-203ENST00000554290 LEMD3Q9Y2U8 911 aa23.91■■□□□ 1.42
CPSF2-203ENST00000554290 ADM5C9JUS6 153 aa23.9■■□□□ 1.42
CPSF2-203ENST00000554290 CSF1RP07333 972 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms