RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 C10orf71Q711Q0 1435 aa9.7□□□□□ -0.86
ATXN3-224ENST00000554040 ITPK1Q13572 414 aa9.69□□□□□ -0.86
ATXN3-224ENST00000554040 USP54Q70EL1 1684 aa9.69□□□□□ -0.86
ATXN3-224ENST00000554040 TRIM46Q7Z4K8 759 aa9.69□□□□□ -0.86
ATXN3-224ENST00000554040 DCAF5Q96JK2 942 aa9.69□□□□□ -0.86
ATXN3-224ENST00000554040 PIM2Q9P1W9 311 aa9.69□□□□□ -0.86
ATXN3-224ENST00000554040 MAP10Q9P2G4 905 aa9.69□□□□□ -0.86
ATXN3-224ENST00000554040 LTN1O94822 1766 aa9.68□□□□□ -0.86
ATXN3-224ENST00000554040 C5P01031 1676 aa9.68□□□□□ -0.86
ATXN3-224ENST00000554040 KCPQ6ZWJ8 1503 aa9.68□□□□□ -0.86
ATXN3-224ENST00000554040 A0A1W2PP64 1363 aa9.68□□□□□ -0.86
ATXN3-224ENST00000554040 PER1O15534 1290 aaPredicted RBP9.68□□□□□ -0.86
ATXN3-224ENST00000554040 WFS1O76024 890 aa9.68□□□□□ -0.86
ATXN3-224ENST00000554040 QPCTQ16769 361 aa9.68□□□□□ -0.86
ATXN3-224ENST00000554040 DALRD3Q5D0E6 543 aaKnown RBP9.68□□□□□ -0.86
ATXN3-224ENST00000554040 PUS7Q96PZ0 661 aaKnown RBP9.68□□□□□ -0.86
ATXN3-224ENST00000554040 SENP2Q9HC62 589 aa9.68□□□□□ -0.86
ATXN3-224ENST00000554040 C4BP0C0L5 1744 aa9.68□□□□□ -0.86
ATXN3-224ENST00000554040 SLC24A1O60721 1099 aa9.67□□□□□ -0.86
ATXN3-224ENST00000554040 BMP1P13497 986 aa9.67□□□□□ -0.86
ATXN3-224ENST00000554040 RRS1Q15050 365 aaKnown RBP9.67□□□□□ -0.86
ATXN3-224ENST00000554040 MPNDQ8N594 471 aa9.67□□□□□ -0.86
ATXN3-224ENST00000554040 ASAP1Q9ULH1 1129 aa9.67□□□□□ -0.86
ATXN3-224ENST00000554040 RTCBQ9Y3I0 505 aaKnown RBP9.67□□□□□ -0.86
ATXN3-224ENST00000554040 PARP3Q9Y6F1 533 aa9.67□□□□□ -0.86
ATXN3-224ENST00000554040 MON2Q7Z3U7 1717 aa9.67□□□□□ -0.86
ATXN3-224ENST00000554040 GYS1P13807 737 aa9.66□□□□□ -0.86
ATXN3-224ENST00000554040 VEGFAP15692 232 aaPredicted RBP9.66□□□□□ -0.86
ATXN3-224ENST00000554040 VARSP26640 1264 aaKnown RBP9.66□□□□□ -0.86
ATXN3-224ENST00000554040 CSPP1Q1MSJ5 1256 aa9.66□□□□□ -0.86
ATXN3-224ENST00000554040 TUSC1Q2TAM9 212 aa9.66□□□□□ -0.86
ATXN3-224ENST00000554040 WASF2Q9Y6W5 498 aa9.66□□□□□ -0.86
ATXN3-224ENST00000554040 FAM208AQ9UK61 1670 aaKnown RBP9.66□□□□□ -0.86
ATXN3-224ENST00000554040 RTL1A6NKG5 1358 aa9.65□□□□□ -0.86
ATXN3-224ENST00000554040 GLTPD2A6NH11 291 aa9.65□□□□□ -0.86
ATXN3-224ENST00000554040 CAPN5O15484 640 aaPredicted RBP9.65□□□□□ -0.86
ATXN3-224ENST00000554040 LILRB3O75022 631 aa9.65□□□□□ -0.86
ATXN3-224ENST00000554040 CTHP32929 405 aa9.65□□□□□ -0.86
ATXN3-224ENST00000554040 HSP90AB2PQ58FF8 381 aa9.65□□□□□ -0.86
ATXN3-224ENST00000554040 FOXJ1Q92949 421 aa9.65□□□□□ -0.86
ATXN3-224ENST00000554040 PRDM10Q9NQV6 1147 aa9.65□□□□□ -0.86
ATXN3-224ENST00000554040 ATG3Q9NT62 314 aa9.65□□□□□ -0.86
ATXN3-224ENST00000554040 TMOD3Q9NYL9 352 aa9.65□□□□□ -0.86
ATXN3-224ENST00000554040 TAF1LQ8IZX4 1826 aa9.65□□□□□ -0.86
ATXN3-224ENST00000554040 TOGARAM1Q9Y4F4 1720 aa9.65□□□□□ -0.87
ATXN3-224ENST00000554040 UBR3Q6ZT12 1888 aa9.64□□□□□ -0.87
ATXN3-224ENST00000554040 ZC3H4Q9UPT8 1303 aaKnown RBP9.64□□□□□ -0.87
ATXN3-224ENST00000554040 RFC4P35249 363 aa9.64□□□□□ -0.87
ATXN3-224ENST00000554040 C4orf48Q5BLP8 95 aa9.64□□□□□ -0.87
ATXN3-224ENST00000554040 KIFC2Q96AC6 838 aa9.64□□□□□ -0.87
ATXN3-224ENST00000554040 SMG6Q86US8 1419 aaKnown RBP9.64□□□□□ -0.87
ATXN3-224ENST00000554040 TERTO14746 1132 aaKnown RBP9.63□□□□□ -0.87
ATXN3-224ENST00000554040 FOXN1O15353 648 aa9.63□□□□□ -0.87
ATXN3-224ENST00000554040 KLF16Q9BXK1 252 aaPredicted RBP9.63□□□□□ -0.87
ATXN3-224ENST00000554040 SPG7Q9UQ90 795 aa9.63□□□□□ -0.87
ATXN3-224ENST00000554040 INSRP06213 1382 aa9.63□□□□□ -0.87
ATXN3-224ENST00000554040 KIF13BQ9NQT8 1826 aa9.62□□□□□ -0.87
ATXN3-224ENST00000554040 FYB1O15117 783 aa9.62□□□□□ -0.87
ATXN3-224ENST00000554040 RPS6KA4O75676 772 aa9.62□□□□□ -0.87
ATXN3-224ENST00000554040 LMNB1P20700 586 aa9.62□□□□□ -0.87
ATXN3-224ENST00000554040 CHRNA5P30532 468 aa9.62□□□□□ -0.87
ATXN3-224ENST00000554040 NNTQ13423 1086 aa9.62□□□□□ -0.87
ATXN3-224ENST00000554040 RTL5Q5HYW3 569 aaPredicted RBP9.62□□□□□ -0.87
ATXN3-224ENST00000554040 SLC4A9Q96Q91 983 aa9.62□□□□□ -0.87
ATXN3-224ENST00000554040 CARD11Q9BXL7 1154 aa9.62□□□□□ -0.87
ATXN3-224ENST00000554040 N4BP2Q86UW6 1770 aaPredicted RBP9.62□□□□□ -0.87
ATXN3-224ENST00000554040 CDK15Q96Q40 435 aa9.61□□□□□ -0.87
ATXN3-224ENST00000554040 SIN3AQ96ST3 1273 aa9.61□□□□□ -0.87
ATXN3-224ENST00000554040 GGNBP2Q9H3C7 697 aa9.61□□□□□ -0.87
ATXN3-224ENST00000554040 MKRN1Q9UHC7 482 aaKnown RBP9.61□□□□□ -0.87
ATXN3-224ENST00000554040 KIAA1551Q9HCM1 1747 aa9.61□□□□□ -0.87
ATXN3-224ENST00000554040 CNTNAP4Q9C0A0 1308 aa9.6□□□□□ -0.87
ATXN3-224ENST00000554040 WIPF1O43516 503 aa9.6□□□□□ -0.87
ATXN3-224ENST00000554040 PHKG2P15735 406 aa9.6□□□□□ -0.87
ATXN3-224ENST00000554040 TIMP2P16035 220 aa9.6□□□□□ -0.87
ATXN3-224ENST00000554040 CTCFP49711 727 aaPredicted RBP9.6□□□□□ -0.87
ATXN3-224ENST00000554040 RASSF7Q02833 373 aa9.6□□□□□ -0.87
ATXN3-224ENST00000554040 IFNL2Q8IZJ0 200 aa9.6□□□□□ -0.87
ATXN3-224ENST00000554040 MAP2P11137 1827 aaKnown RBP9.6□□□□□ -0.87
ATXN3-224ENST00000554040 RGPD2P0DJD1 1756 aa9.6□□□□□ -0.87
ATXN3-224ENST00000554040 ADH1CP00326 375 aa9.59□□□□□ -0.87
ATXN3-224ENST00000554040 DDR1Q08345 913 aa9.59□□□□□ -0.87
ATXN3-224ENST00000554040 NEUROD1Q13562 356 aa9.59□□□□□ -0.87
ATXN3-224ENST00000554040 SRP68Q9UHB9 627 aaKnown RBP9.59□□□□□ -0.87
ATXN3-224ENST00000554040 FLT4P35916 1363 aa9.59□□□□□ -0.87
ATXN3-224ENST00000554040 KIF24Q5T7B8 1368 aa9.59□□□□□ -0.87
ATXN3-224ENST00000554040 KDM6AO15550 1401 aaPredicted RBP9.58□□□□□ -0.88
ATXN3-224ENST00000554040 POLRMTO00411 1230 aaKnown RBP9.58□□□□□ -0.88
ATXN3-224ENST00000554040 TM4SF1P30408 202 aa9.58□□□□□ -0.88
ATXN3-224ENST00000554040 CLK2P49760 499 aaKnown RBP9.58□□□□□ -0.88
ATXN3-224ENST00000554040 FAM174AQ8TBP5 190 aa9.58□□□□□ -0.88
ATXN3-224ENST00000554040 AIDAQ96BJ3 306 aa9.58□□□□□ -0.88
ATXN3-224ENST00000554040 KDRP35968 1356 aa9.58□□□□□ -0.88
ATXN3-224ENST00000554040 ERVV-2B6SEH9 535 aa9.57□□□□□ -0.88
ATXN3-224ENST00000554040 NR3C2P08235 984 aa9.57□□□□□ -0.88
ATXN3-224ENST00000554040 SH3RF1Q7Z6J0 888 aa9.57□□□□□ -0.88
ATXN3-224ENST00000554040 ABHD8Q96I13 439 aa9.57□□□□□ -0.88
ATXN3-224ENST00000554040 ZFP42Q96MM3 310 aa9.57□□□□□ -0.88
ATXN3-224ENST00000554040 CNTNAP1P78357 1384 aa9.57□□□□□ -0.88
ATXN3-224ENST00000554040 TONSLQ96HA7 1378 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms