RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 SHTN1A0MZ66 631 aa11.43□□□□□ -0.58
TDP1-208ENST00000553989 PSMD14O00487 310 aa11.43□□□□□ -0.58
TDP1-208ENST00000553989 IRS4O14654 1257 aaPredicted RBP11.43□□□□□ -0.58
TDP1-208ENST00000553989 DSG3P32926 999 aa11.43□□□□□ -0.58
TDP1-208ENST00000553989 MAP2K2P36507 400 aa11.43□□□□□ -0.58
TDP1-208ENST00000553989 RBM26Q5T8P6 1007 aaKnown RBP11.43□□□□□ -0.58
TDP1-208ENST00000553989 SPOCK2Q92563 424 aa11.43□□□□□ -0.58
TDP1-208ENST00000553989 ISCA1Q9BUE6 129 aa11.43□□□□□ -0.58
TDP1-208ENST00000553989 TAF1P21675 1872 aa11.42□□□□□ -0.58
TDP1-208ENST00000553989 SPDYE2BA6NHP3 402 aa11.42□□□□□ -0.58
TDP1-208ENST00000553989 CCDC85CA6NKD9 419 aa11.42□□□□□ -0.58
TDP1-208ENST00000553989 ECE2O60344 883 aa11.42□□□□□ -0.58
TDP1-208ENST00000553989 SPDYE6P0CI01 402 aa11.42□□□□□ -0.58
TDP1-208ENST00000553989 HIRAP54198 1017 aaPredicted RBP11.42□□□□□ -0.58
TDP1-208ENST00000553989 GPSM2P81274 684 aa11.42□□□□□ -0.58
TDP1-208ENST00000553989 SF3B3Q15393 1217 aaKnown RBP11.42□□□□□ -0.58
TDP1-208ENST00000553989 DOK7Q18PE1 504 aa11.42□□□□□ -0.58
TDP1-208ENST00000553989 SPDYE2Q495Y8 402 aa11.42□□□□□ -0.58
TDP1-208ENST00000553989 TBC1D10BQ4KMP7 808 aaPredicted RBP11.42□□□□□ -0.58
TDP1-208ENST00000553989 SAMD7Q7Z3H4 446 aa11.42□□□□□ -0.58
TDP1-208ENST00000553989 USP48Q86UV5 1035 aa11.42□□□□□ -0.58
TDP1-208ENST00000553989 CFAP44Q96MT7 982 aa11.42□□□□□ -0.58
TDP1-208ENST00000553989 MBIPQ9NS73 344 aa11.42□□□□□ -0.58
TDP1-208ENST00000553989 ADAMTS8Q9UP79 889 aa11.42□□□□□ -0.58
TDP1-208ENST00000553989 DDX60Q8IY21 1712 aaKnown RBP11.42□□□□□ -0.58
TDP1-208ENST00000553989 LRRC37AA6NMS7 1700 aa11.41□□□□□ -0.58
TDP1-208ENST00000553989 CA12O43570 354 aa11.41□□□□□ -0.58
TDP1-208ENST00000553989 HSP90B1P14625 803 aaKnown RBP11.41□□□□□ -0.58
TDP1-208ENST00000553989 HUNKP57058 714 aa11.41□□□□□ -0.58
TDP1-208ENST00000553989 KRT26Q7Z3Y9 468 aa11.41□□□□□ -0.58
TDP1-208ENST00000553989 DCPSQ96C86 337 aaKnown RBP11.41□□□□□ -0.58
TDP1-208ENST00000553989 HHIPL1Q96JK4 782 aa11.41□□□□□ -0.58
TDP1-208ENST00000553989 ANKIB1Q9P2G1 1089 aa11.41□□□□□ -0.58
TDP1-208ENST00000553989 POLLQ9UGP5 575 aa11.41□□□□□ -0.58
TDP1-208ENST00000553989 PGAP2Q9UHJ9 254 aa11.41□□□□□ -0.58
TDP1-208ENST00000553989 ELL2O00472 640 aaPredicted RBP11.4□□□□□ -0.58
TDP1-208ENST00000553989 UFL1O94874 794 aa11.4□□□□□ -0.58
TDP1-208ENST00000553989 RPS12P25398 132 aaKnown RBP11.4□□□□□ -0.58
TDP1-208ENST00000553989 BRPF1P55201 1214 aaPredicted RBP11.4□□□□□ -0.58
TDP1-208ENST00000553989 RPS8P62241 208 aaKnown RBP11.4□□□□□ -0.58
TDP1-208ENST00000553989 CALD1Q05682 793 aaKnown RBP11.4□□□□□ -0.58
TDP1-208ENST00000553989 NOGQ13253 232 aa11.4□□□□□ -0.58
TDP1-208ENST00000553989 FAM161AQ3B820 660 aa11.4□□□□□ -0.58
TDP1-208ENST00000553989 ZBTB38Q8NAP3 1195 aaPredicted RBP11.4□□□□□ -0.58
TDP1-208ENST00000553989 DPF2Q92785 391 aa11.4□□□□□ -0.58
TDP1-208ENST00000553989 MYD88Q99836 296 aa11.4□□□□□ -0.58
TDP1-208ENST00000553989 ZC3H12CQ9C0D7 883 aaKnown RBP11.4□□□□□ -0.58
TDP1-208ENST00000553989 KIF4BQ2VIQ3 1234 aa11.39□□□□□ -0.59
TDP1-208ENST00000553989 CCDC152Q4G0S7 254 aa11.39□□□□□ -0.59
TDP1-208ENST00000553989 DLK2Q6UY11 383 aa11.39□□□□□ -0.59
TDP1-208ENST00000553989 C2orf69Q8N8R5 385 aa11.39□□□□□ -0.59
TDP1-208ENST00000553989 TBC1D16Q8TBP0 767 aa11.39□□□□□ -0.59
TDP1-208ENST00000553989 CCDC85AQ96PX6 553 aaPredicted RBP11.39□□□□□ -0.59
TDP1-208ENST00000553989 PHAXQ9H814 394 aaKnown RBP11.39□□□□□ -0.59
TDP1-208ENST00000553989 GBA2Q9HCG7 927 aaPredicted RBP11.39□□□□□ -0.59
TDP1-208ENST00000553989 GGA1Q9UJY5 639 aa11.39□□□□□ -0.59
TDP1-208ENST00000553989 SSUH2Q9Y2M2 353 aa11.39□□□□□ -0.59
TDP1-208ENST00000553989 ADM5C9JUS6 153 aa11.38□□□□□ -0.59
TDP1-208ENST00000553989 APAF1O14727 1248 aa11.38□□□□□ -0.59
TDP1-208ENST00000553989 DDX58O95786 925 aaKnown RBP11.38□□□□□ -0.59
TDP1-208ENST00000553989 EGFRP00533 1210 aa11.38□□□□□ -0.59
TDP1-208ENST00000553989 GNAI1P63096 354 aa11.38□□□□□ -0.59
TDP1-208ENST00000553989 TRIM28Q13263 835 aaKnown RBP11.38□□□□□ -0.59
TDP1-208ENST00000553989 SULF1Q8IWU6 871 aa11.38□□□□□ -0.59
TDP1-208ENST00000553989 SEC31BQ9NQW1 1179 aa11.38□□□□□ -0.59
TDP1-208ENST00000553989 KCNQ5Q9NR82 932 aa11.38□□□□□ -0.59
TDP1-208ENST00000553989 IFT57Q9NWB7 429 aa11.38□□□□□ -0.59
TDP1-208ENST00000553989 GGA3Q9NZ52 723 aa11.38□□□□□ -0.59
TDP1-208ENST00000553989 RTL9Q8NET4 1388 aa11.38□□□□□ -0.59
TDP1-208ENST00000553989 COL4A1P02462 1669 aa11.37□□□□□ -0.59
TDP1-208ENST00000553989 RGMBQ6NW40 437 aa11.37□□□□□ -0.59
TDP1-208ENST00000553989 ANKRD18AQ8IVF6 992 aa11.37□□□□□ -0.59
TDP1-208ENST00000553989 JARID2Q92833 1246 aaPredicted RBP11.37□□□□□ -0.59
TDP1-208ENST00000553989 CWC25Q9NXE8 425 aaPredicted RBP11.37□□□□□ -0.59
TDP1-208ENST00000553989 PDE8AO60658 829 aa11.36□□□□□ -0.59
TDP1-208ENST00000553989 PCCAP05165 728 aaPredicted RBP11.36□□□□□ -0.59
TDP1-208ENST00000553989 ZNF157P51786 506 aaPredicted RBP11.36□□□□□ -0.59
TDP1-208ENST00000553989 MLLT1Q03111 559 aaPredicted RBP11.36□□□□□ -0.59
TDP1-208ENST00000553989 DGKZQ13574 1117 aa11.36□□□□□ -0.59
TDP1-208ENST00000553989 CCDC30Q5VVM6 783 aa11.36□□□□□ -0.59
TDP1-208ENST00000553989 POTEDQ86YR6 584 aa11.36□□□□□ -0.59
TDP1-208ENST00000553989 CCDC191Q8NCU4 936 aa11.36□□□□□ -0.59
TDP1-208ENST00000553989 CHMP4AQ9BY43 222 aa11.36□□□□□ -0.59
TDP1-208ENST00000553989 MCOLN1Q9GZU1 580 aa11.36□□□□□ -0.59
TDP1-208ENST00000553989 PODXL2Q9NZ53 605 aa11.36□□□□□ -0.59
TDP1-208ENST00000553989 CCER2I3L3R5 266 aa11.35□□□□□ -0.59
TDP1-208ENST00000553989 VIL1P09327 827 aaKnown RBP11.35□□□□□ -0.59
TDP1-208ENST00000553989 ZNF853P0CG23 659 aa11.35□□□□□ -0.59
TDP1-208ENST00000553989 PLCD3Q8N3E9 789 aa11.35□□□□□ -0.59
TDP1-208ENST00000553989 FBXW7Q969H0 707 aa11.35□□□□□ -0.59
TDP1-208ENST00000553989 CCDC102AQ96A19 550 aa11.35□□□□□ -0.59
TDP1-208ENST00000553989 ZIC5Q96T25 663 aa11.35□□□□□ -0.59
TDP1-208ENST00000553989 PRKRIP1Q9H875 184 aaPredicted RBP11.35□□□□□ -0.59
TDP1-208ENST00000553989 XDHP47989 1333 aa11.35□□□□□ -0.59
TDP1-208ENST00000553989 ECM2O94769 699 aaPredicted RBP11.34□□□□□ -0.59
TDP1-208ENST00000553989 NEXNQ0ZGT2 675 aa11.34□□□□□ -0.59
TDP1-208ENST00000553989 ANGEL2Q5VTE6 544 aaKnown RBP11.34□□□□□ -0.59
TDP1-208ENST00000553989 RSBN1LQ6PCB5 846 aaPredicted RBP11.34□□□□□ -0.59
TDP1-208ENST00000553989 C8orf58Q8NAV2 365 aa11.34□□□□□ -0.59
TDP1-208ENST00000553989 CDCA5Q96FF9 252 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms