RNA–Protein interactions for RNA: ENST00000553691.5

VIPAS39-205, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-205ENST00000553691 JMYQ8N9B5 988 aa8.85□□□□□ -0.99
VIPAS39-205ENST00000553691 HPS1Q92902 700 aa8.85□□□□□ -0.99
VIPAS39-205ENST00000553691 KLRG1Q96E93 195 aa8.85□□□□□ -0.99
VIPAS39-205ENST00000553691 SIAH2O43255 324 aa8.84□□□□□ -0.99
VIPAS39-205ENST00000553691 RFC5P40937 340 aa8.84□□□□□ -0.99
VIPAS39-205ENST00000553691 AGERQ15109 404 aa8.84□□□□□ -0.99
VIPAS39-205ENST00000553691 NR6A1Q15406 480 aa8.84□□□□□ -0.99
VIPAS39-205ENST00000553691 SLC27A3Q5K4L6 730 aa8.84□□□□□ -0.99
VIPAS39-205ENST00000553691 C16orf71Q8IYS4 520 aaPredicted RBP8.84□□□□□ -0.99
VIPAS39-205ENST00000553691 AAASQ9NRG9 546 aa8.84□□□□□ -0.99
VIPAS39-205ENST00000553691 DACH1Q9UI36 760 aa8.84□□□□□ -0.99
VIPAS39-205ENST00000553691 KAT6BQ8WYB5 2073 aa8.84□□□□□ -0.99
VIPAS39-205ENST00000553691 ITGB4P16144 1822 aa8.83□□□□□ -1
VIPAS39-205ENST00000553691 POLR3GLQ9BT43 218 aa8.83□□□□□ -1
VIPAS39-205ENST00000553691 PNPLA7Q6ZV29 1317 aa8.82□□□□□ -1
VIPAS39-205ENST00000553691 HTRA3P83110 453 aa8.82□□□□□ -1
VIPAS39-205ENST00000553691 EIF4A2Q14240 407 aaKnown RBP8.82□□□□□ -1
VIPAS39-205ENST00000553691 C4orf48Q5BLP8 95 aa8.82□□□□□ -1
VIPAS39-205ENST00000553691 EPS8L1Q8TE68 723 aa8.82□□□□□ -1
VIPAS39-205ENST00000553691 CD2APQ9Y5K6 639 aa8.82□□□□□ -1
VIPAS39-205ENST00000553691 POTECB2RU33 542 aa8.81□□□□□ -1
VIPAS39-205ENST00000553691 AXIN1O15169 862 aa8.81□□□□□ -1
VIPAS39-205ENST00000553691 CYP27B1O15528 508 aa8.81□□□□□ -1
VIPAS39-205ENST00000553691 USP17L8P0C7I0 530 aa8.81□□□□□ -1
VIPAS39-205ENST00000553691 ARID5BQ14865 1188 aa8.81□□□□□ -1
VIPAS39-205ENST00000553691 ZCRB1Q8TBF4 217 aaKnown RBP8.81□□□□□ -1
VIPAS39-205ENST00000553691 DDX54Q8TDD1 881 aaKnown RBP8.81□□□□□ -1
VIPAS39-205ENST00000553691 HMX1Q9NP08 348 aaPredicted RBP8.81□□□□□ -1
VIPAS39-205ENST00000553691 LRRC4BQ9NT99 713 aa8.81□□□□□ -1
VIPAS39-205ENST00000553691 WASF2Q9Y6W5 498 aa8.81□□□□□ -1
VIPAS39-205ENST00000553691 IGSF1Q8N6C5 1336 aa8.8□□□□□ -1
VIPAS39-205ENST00000553691 VARSP26640 1264 aaKnown RBP8.8□□□□□ -1
VIPAS39-205ENST00000553691 TNNT2P45379 298 aaPredicted RBP8.8□□□□□ -1
VIPAS39-205ENST00000553691 ZNF787Q6DD87 383 aa8.8□□□□□ -1
VIPAS39-205ENST00000553691 GOPCQ9HD26 462 aa8.8□□□□□ -1
VIPAS39-205ENST00000553691 COL3A1P02461 1466 aaPredicted RBP8.8□□□□□ -1
VIPAS39-205ENST00000553691 TAF1LQ8IZX4 1826 aa8.8□□□□□ -1
VIPAS39-205ENST00000553691 PLEKHG2Q9H7P9 1386 aa8.79□□□□□ -1
VIPAS39-205ENST00000553691 MAGEB6P1A0A0J9YX57 407 aa8.79□□□□□ -1
VIPAS39-205ENST00000553691 AVPP01185 164 aa8.79□□□□□ -1
VIPAS39-205ENST00000553691 MSL1Q68DK7 614 aa8.79□□□□□ -1
VIPAS39-205ENST00000553691 TNRC18O15417 2968 aaPredicted RBP8.79□□□□□ -1
VIPAS39-205ENST00000553691 PCDH11XQ9BZA7 1347 aa8.79□□□□□ -1
VIPAS39-205ENST00000553691 PCDH11YQ9BZA8 1340 aa8.79□□□□□ -1
VIPAS39-205ENST00000553691 KDRP35968 1356 aa8.78□□□□□ -1
VIPAS39-205ENST00000553691 NPC1L1Q9UHC9 1359 aa8.78□□□□□ -1
VIPAS39-205ENST00000553691 PPM1GO15355 546 aaPredicted RBP8.78□□□□□ -1
VIPAS39-205ENST00000553691 HSPA1AP0DMV8 641 aaKnown RBP8.78□□□□□ -1
VIPAS39-205ENST00000553691 HSPA1BP0DMV9 641 aaKnown RBP8.78□□□□□ -1
VIPAS39-205ENST00000553691 TATP17735 454 aaPredicted RBP8.78□□□□□ -1
VIPAS39-205ENST00000553691 HMGB2P26583 209 aaKnown RBP8.78□□□□□ -1
VIPAS39-205ENST00000553691 ARMC2Q8NEN0 867 aa8.78□□□□□ -1
VIPAS39-205ENST00000553691 FAM174AQ8TBP5 190 aa8.78□□□□□ -1
VIPAS39-205ENST00000553691 RAPGEF4Q8WZA2 1011 aa8.78□□□□□ -1
VIPAS39-205ENST00000553691 SYTL4Q96C24 671 aaPredicted RBP8.78□□□□□ -1
VIPAS39-205ENST00000553691 C5P01031 1676 aa8.78□□□□□ -1
VIPAS39-205ENST00000553691 IL13P35225 146 aa8.77□□□□□ -1.01
VIPAS39-205ENST00000553691 FSTL1Q12841 308 aa8.77□□□□□ -1.01
VIPAS39-205ENST00000553691 BPHLQ86WA6 291 aaPredicted RBP8.77□□□□□ -1.01
VIPAS39-205ENST00000553691 ADAMTS7Q9UKP4 1686 aa8.76□□□□□ -1.01
VIPAS39-205ENST00000553691 KCNQ4P56696 695 aa8.76□□□□□ -1.01
VIPAS39-205ENST00000553691 MORC1Q86VD1 984 aa8.76□□□□□ -1.01
VIPAS39-205ENST00000553691 AEBP1Q8IUX7 1158 aa8.76□□□□□ -1.01
VIPAS39-205ENST00000553691 FLAD1Q8NFF5 587 aa8.76□□□□□ -1.01
VIPAS39-205ENST00000553691 FKBPLQ9UIM3 349 aa8.76□□□□□ -1.01
VIPAS39-205ENST00000553691 CCNL1Q9UK58 526 aaPredicted RBP8.76□□□□□ -1.01
VIPAS39-205ENST00000553691 KNSTRNQ9Y448 316 aa8.76□□□□□ -1.01
VIPAS39-205ENST00000553691 KDM6AO15550 1401 aaPredicted RBP8.76□□□□□ -1.01
VIPAS39-205ENST00000553691 PHKG2P15735 406 aa8.75□□□□□ -1.01
VIPAS39-205ENST00000553691 SH3BP5LQ7L8J4 393 aa8.75□□□□□ -1.01
VIPAS39-205ENST00000553691 COL23A1Q86Y22 540 aaPredicted RBP8.75□□□□□ -1.01
VIPAS39-205ENST00000553691 VIRMAQ69YN4 1812 aaKnown RBP8.75□□□□□ -1.01
VIPAS39-205ENST00000553691 C4BP0C0L5 1744 aa8.74□□□□□ -1.01
VIPAS39-205ENST00000553691 SCN11AQ9UI33 1791 aa8.74□□□□□ -1.01
VIPAS39-205ENST00000553691 NNTQ13423 1086 aa8.74□□□□□ -1.01
VIPAS39-205ENST00000553691 CTC1Q2NKJ3 1217 aa8.74□□□□□ -1.01
VIPAS39-205ENST00000553691 DIEXFQ68CQ4 756 aaKnown RBP8.74□□□□□ -1.01
VIPAS39-205ENST00000553691 SH3RF1Q7Z6J0 888 aa8.74□□□□□ -1.01
VIPAS39-205ENST00000553691 CRIPAKQ8N1N5 446 aa8.74□□□□□ -1.01
VIPAS39-205ENST00000553691 PIGBQ92521 554 aa8.74□□□□□ -1.01
VIPAS39-205ENST00000553691 NMRK2Q9NPI5 230 aa8.74□□□□□ -1.01
VIPAS39-205ENST00000553691 GMPR2Q9P2T1 348 aaKnown RBP8.74□□□□□ -1.01
VIPAS39-205ENST00000553691 ZNF831Q5JPB2 1677 aa8.74□□□□□ -1.01
VIPAS39-205ENST00000553691 UBR3Q6ZT12 1888 aa8.74□□□□□ -1.01
VIPAS39-205ENST00000553691 PALLDQ8WX93 1383 aa8.73□□□□□ -1.01
VIPAS39-205ENST00000553691 CICQ96RK0 1608 aaPredicted RBP8.73□□□□□ -1.01
VIPAS39-205ENST00000553691 TNRC6CQ9HCJ0 1690 aaKnown RBP8.73□□□□□ -1.01
VIPAS39-205ENST00000553691 SMCPP49901 116 aaPredicted RBP8.73□□□□□ -1.01
VIPAS39-205ENST00000553691 MTHFSP49914 203 aa8.73□□□□□ -1.01
VIPAS39-205ENST00000553691 TMEM259Q4ZIN3 620 aa8.73□□□□□ -1.01
VIPAS39-205ENST00000553691 CC2D1BQ5T0F9 858 aaKnown RBP8.73□□□□□ -1.01
VIPAS39-205ENST00000553691 AMIGO3Q86WK7 504 aa8.73□□□□□ -1.01
VIPAS39-205ENST00000553691 ARHGAP9Q9BRR9 750 aa8.73□□□□□ -1.01
VIPAS39-205ENST00000553691 COL5A3P25940 1745 aaPredicted RBP8.73□□□□□ -1.01
VIPAS39-205ENST00000553691 PDE4DIPQ5VU43 2346 aa8.72□□□□□ -1.01
VIPAS39-205ENST00000553691 MRC1P22897 1456 aa8.72□□□□□ -1.01
VIPAS39-205ENST00000553691 ARHGAP27Q6ZUM4 889 aa8.72□□□□□ -1.01
VIPAS39-205ENST00000553691 SPG7Q9UQ90 795 aa8.72□□□□□ -1.01
VIPAS39-205ENST00000553691 KDM2BQ8NHM5 1336 aa8.72□□□□□ -1.01
VIPAS39-205ENST00000553691 CAPN5O15484 640 aaPredicted RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms