RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 USP42Q9H9J4 1324 aaKnown RBP8.96□□□□□ -0.98
ATXN3-221ENST00000553498 RGPD2P0DJD1 1756 aa8.96□□□□□ -0.98
ATXN3-221ENST00000553498 SCN11AQ9UI33 1791 aa8.95□□□□□ -0.98
ATXN3-221ENST00000553498 PRAMEF22A3QJZ6 481 aa8.95□□□□□ -0.98
ATXN3-221ENST00000553498 ANXA1P04083 346 aa8.95□□□□□ -0.98
ATXN3-221ENST00000553498 IGKV5-2P06315 115 aa8.95□□□□□ -0.98
ATXN3-221ENST00000553498 BARGINQ6ZT62 677 aa8.95□□□□□ -0.98
ATXN3-221ENST00000553498 RHPN1Q8TCX5 695 aa8.95□□□□□ -0.98
ATXN3-221ENST00000553498 NLRP7Q8WX94 980 aa8.95□□□□□ -0.98
ATXN3-221ENST00000553498 SNX21Q969T3 373 aa8.95□□□□□ -0.98
ATXN3-221ENST00000553498 EXOC6BQ9Y2D4 811 aa8.95□□□□□ -0.98
ATXN3-221ENST00000553498 ERC2O15083 957 aa8.94□□□□□ -0.98
ATXN3-221ENST00000553498 RNF40O75150 1001 aa8.94□□□□□ -0.98
ATXN3-221ENST00000553498 MYL6BP14649 208 aa8.94□□□□□ -0.98
ATXN3-221ENST00000553498 SDSP20132 328 aa8.94□□□□□ -0.98
ATXN3-221ENST00000553498 AIMP1Q12904 312 aaKnown RBP8.94□□□□□ -0.98
ATXN3-221ENST00000553498 TRIM28Q13263 835 aaKnown RBP8.94□□□□□ -0.98
ATXN3-221ENST00000553498 TICAM2Q86XR7 235 aa8.94□□□□□ -0.98
ATXN3-221ENST00000553498 C16orf71Q8IYS4 520 aaPredicted RBP8.94□□□□□ -0.98
ATXN3-221ENST00000553498 CLASRPQ8N2M8 674 aaKnown RBP8.94□□□□□ -0.98
ATXN3-221ENST00000553498 CCDC191Q8NCU4 936 aa8.94□□□□□ -0.98
ATXN3-221ENST00000553498 SPATA31A1Q5TZJ5 1347 aa8.94□□□□□ -0.98
ATXN3-221ENST00000553498 KCPQ6ZWJ8 1503 aa8.94□□□□□ -0.98
ATXN3-221ENST00000553498 GLRX3O76003 335 aaKnown RBP8.93□□□□□ -0.98
ATXN3-221ENST00000553498 G3BP1Q13283 466 aaKnown RBP eCLIP8.93□□□□□ -0.98
ATXN3-221ENST00000553498 CWF19L2Q2TBE0 894 aaKnown RBP8.93□□□□□ -0.98
ATXN3-221ENST00000553498 RABL6Q3YEC7 729 aaPredicted RBP8.93□□□□□ -0.98
ATXN3-221ENST00000553498 HSP90AB3PQ58FF7 597 aa8.93□□□□□ -0.98
ATXN3-221ENST00000553498 TJAP1Q5JTD0 557 aa8.93□□□□□ -0.98
ATXN3-221ENST00000553498 MYD88Q99836 296 aa8.93□□□□□ -0.98
ATXN3-221ENST00000553498 ATG3Q9NT62 314 aa8.93□□□□□ -0.98
ATXN3-221ENST00000553498 BCL9O00512 1426 aa8.93□□□□□ -0.98
ATXN3-221ENST00000553498 CACNA1FO60840 1977 aa8.93□□□□□ -0.98
ATXN3-221ENST00000553498 PLCH1Q4KWH8 1693 aa8.92□□□□□ -0.98
ATXN3-221ENST00000553498 COL16A1Q07092 1604 aaPredicted RBP8.92□□□□□ -0.98
ATXN3-221ENST00000553498 SPATA31A5Q5VU36 1347 aa8.92□□□□□ -0.98
ATXN3-221ENST00000553498 SPATA31A7Q8IWB4 1347 aa8.92□□□□□ -0.98
ATXN3-221ENST00000553498 SMARCA5O60264 1052 aaPredicted RBP8.92□□□□□ -0.98
ATXN3-221ENST00000553498 OS9Q13438 667 aaPredicted RBP8.92□□□□□ -0.98
ATXN3-221ENST00000553498 HSCBQ8IWL3 235 aa8.92□□□□□ -0.98
ATXN3-221ENST00000553498 PIGBQ92521 554 aa8.92□□□□□ -0.98
ATXN3-221ENST00000553498 CCDC102AQ96A19 550 aa8.92□□□□□ -0.98
ATXN3-221ENST00000553498 SUCLG2Q96I99 432 aa8.92□□□□□ -0.98
ATXN3-221ENST00000553498 COPRSQ9NQ92 184 aa8.92□□□□□ -0.98
ATXN3-221ENST00000553498 CWC25Q9NXE8 425 aaPredicted RBP8.92□□□□□ -0.98
ATXN3-221ENST00000553498 RGPD5Q99666 1765 aa8.91□□□□□ -0.98
ATXN3-221ENST00000553498 PAPPAQ13219 1627 aa8.91□□□□□ -0.98
ATXN3-221ENST00000553498 SLIT2O94813 1529 aa8.91□□□□□ -0.98
ATXN3-221ENST00000553498 JCADQ9P266 1359 aa8.91□□□□□ -0.98
ATXN3-221ENST00000553498 SPATA31A6Q5VVP1 1343 aa8.91□□□□□ -0.98
ATXN3-221ENST00000553498 H7C1W4 665 aa8.91□□□□□ -0.98
ATXN3-221ENST00000553498 APBB1O00213 710 aa8.91□□□□□ -0.98
ATXN3-221ENST00000553498 MCCP23508 829 aa8.91□□□□□ -0.98
ATXN3-221ENST00000553498 ANAPC15P60006 121 aa8.91□□□□□ -0.98
ATXN3-221ENST00000553498 RABEP1Q15276 862 aa8.91□□□□□ -0.98
ATXN3-221ENST00000553498 DDB1Q16531 1140 aa8.91□□□□□ -0.98
ATXN3-221ENST00000553498 NBPF14Q5TI25 921 aa8.91□□□□□ -0.98
ATXN3-221ENST00000553498 NBPF10Q6P3W6 841 aaKnown RBP8.91□□□□□ -0.98
ATXN3-221ENST00000553498 KIF6Q6ZMV9 814 aa8.91□□□□□ -0.98
ATXN3-221ENST00000553498 CNTROBQ8N137 903 aa8.91□□□□□ -0.98
ATXN3-221ENST00000553498 NBPF15Q8N660 670 aa8.91□□□□□ -0.98
ATXN3-221ENST00000553498 OTUD7AQ8TE49 926 aaPredicted RBP8.91□□□□□ -0.98
ATXN3-221ENST00000553498 BICC1Q9H694 974 aaKnown RBP8.91□□□□□ -0.98
ATXN3-221ENST00000553498 ECHDC1Q9NTX5 307 aa8.91□□□□□ -0.98
ATXN3-221ENST00000553498 GLI3P10071 1580 aa8.9□□□□□ -0.98
ATXN3-221ENST00000553498 VIRMAQ69YN4 1812 aaKnown RBP8.9□□□□□ -0.98
ATXN3-221ENST00000553498 A0A087WZG4 1122 aa8.9□□□□□ -0.98
ATXN3-221ENST00000553498 HIP1O00291 1037 aa8.9□□□□□ -0.98
ATXN3-221ENST00000553498 PTCD1O75127 700 aaKnown RBP8.9□□□□□ -0.98
ATXN3-221ENST00000553498 IFIT2P09913 472 aaKnown RBP8.9□□□□□ -0.98
ATXN3-221ENST00000553498 CASP7P55210 303 aa8.9□□□□□ -0.98
ATXN3-221ENST00000553498 SMARCC1Q92922 1105 aaPredicted RBP8.9□□□□□ -0.98
ATXN3-221ENST00000553498 IL17RAQ96F46 866 aa8.9□□□□□ -0.98
ATXN3-221ENST00000553498 KAZALD1Q96I82 304 aa8.9□□□□□ -0.98
ATXN3-221ENST00000553498 ISCA1Q9BUE6 129 aa8.9□□□□□ -0.98
ATXN3-221ENST00000553498 USP26Q9BXU7 913 aa8.9□□□□□ -0.98
ATXN3-221ENST00000553498 TBC1D2Q9BYX2 928 aa8.9□□□□□ -0.98
ATXN3-221ENST00000553498 ERVV-1B6SEH8 477 aa8.89□□□□□ -0.99
ATXN3-221ENST00000553498 UBAP1LF5GYI3 381 aa8.89□□□□□ -0.99
ATXN3-221ENST00000553498 IL6STP40189 918 aaPredicted RBP8.89□□□□□ -0.99
ATXN3-221ENST00000553498 SLC4A3P48751 1232 aa8.89□□□□□ -0.99
ATXN3-221ENST00000553498 TCIRG1Q13488 830 aa8.89□□□□□ -0.99
ATXN3-221ENST00000553498 VPS72Q15906 364 aa8.89□□□□□ -0.99
ATXN3-221ENST00000553498 RTL5Q5HYW3 569 aaPredicted RBP8.89□□□□□ -0.99
ATXN3-221ENST00000553498 UNC5CLQ8IV45 518 aa8.89□□□□□ -0.99
ATXN3-221ENST00000553498 PI4K2BQ8TCG2 481 aa8.89□□□□□ -0.99
ATXN3-221ENST00000553498 RUFY2Q8WXA3 655 aa8.89□□□□□ -0.99
ATXN3-221ENST00000553498 MTRQ99707 1265 aa8.89□□□□□ -0.99
ATXN3-221ENST00000553498 ESYT1Q9BSJ8 1104 aa8.89□□□□□ -0.99
ATXN3-221ENST00000553498 TMUB1Q9BVT8 246 aa8.89□□□□□ -0.99
ATXN3-221ENST00000553498 PLA2G12BQ9BX93 195 aa8.89□□□□□ -0.99
ATXN3-221ENST00000553498 GPR108Q9NPR9 543 aa8.89□□□□□ -0.99
ATXN3-221ENST00000553498 LAMB4A4D0S4 1761 aa8.89□□□□□ -0.99
ATXN3-221ENST00000553498 ADAMTS2O95450 1211 aa8.88□□□□□ -0.99
ATXN3-221ENST00000553498 A1BGP04217 495 aa8.88□□□□□ -0.99
ATXN3-221ENST00000553498 CYP19A1P11511 503 aaPredicted RBP8.88□□□□□ -0.99
ATXN3-221ENST00000553498 HSP90B1P14625 803 aaKnown RBP8.88□□□□□ -0.99
ATXN3-221ENST00000553498 CHMLP26374 656 aa8.88□□□□□ -0.99
ATXN3-221ENST00000553498 MCM2P49736 904 aa8.88□□□□□ -0.99
ATXN3-221ENST00000553498 KCNC4Q03721 635 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms