RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 CHMP3Q9Y3E7 222 aa18.52■□□□□ 0.56
ABCD4-218ENST00000553486 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.52■□□□□ 0.56
ABCD4-218ENST00000553486 RAD50Q92878 1312 aa18.51■□□□□ 0.55
ABCD4-218ENST00000553486 NEK4P51957 841 aa18.51■□□□□ 0.55
ABCD4-218ENST00000553486 TNNI3KQ59H18 835 aa18.51■□□□□ 0.55
ABCD4-218ENST00000553486 CWC27Q6UX04 472 aaKnown RBP18.51■□□□□ 0.55
ABCD4-218ENST00000553486 PIM2Q9P1W9 311 aa18.51■□□□□ 0.55
ABCD4-218ENST00000553486 ZNF330Q9Y3S2 320 aaPredicted RBP18.51■□□□□ 0.55
ABCD4-218ENST00000553486 FPGT-TNNI3KV9GXZ4 949 aa18.51■□□□□ 0.55
ABCD4-218ENST00000553486 TFCP2Q12800 502 aa18.51■□□□□ 0.55
ABCD4-218ENST00000553486 RAB3GAP1Q15042 981 aa18.51■□□□□ 0.55
ABCD4-218ENST00000553486 IL25Q9H293 177 aa18.51■□□□□ 0.55
ABCD4-218ENST00000553486 NARFQ9UHQ1 456 aa18.51■□□□□ 0.55
ABCD4-218ENST00000553486 LSG1Q9H089 658 aaKnown RBP18.5■□□□□ 0.55
ABCD4-218ENST00000553486 CWC22Q9HCG8 908 aaKnown RBP18.5■□□□□ 0.55
ABCD4-218ENST00000553486 TLR7Q9NYK1 1049 aaKnown RBP18.5■□□□□ 0.55
ABCD4-218ENST00000553486 PALD1Q9ULE6 856 aa18.5■□□□□ 0.55
ABCD4-218ENST00000553486 BRCA1P38398 1863 aaKnown RBP18.49■□□□□ 0.55
ABCD4-218ENST00000553486 KIF3CO14782 793 aa18.49■□□□□ 0.55
ABCD4-218ENST00000553486 MAP3K15Q6ZN16 1313 aa18.49■□□□□ 0.55
ABCD4-218ENST00000553486 DALRD3Q5D0E6 543 aaKnown RBP18.49■□□□□ 0.55
ABCD4-218ENST00000553486 BOLA2Q9H3K6 86 aa18.49■□□□□ 0.55
ABCD4-218ENST00000553486 ATP5JP18859 108 aa18.48■□□□□ 0.55
ABCD4-218ENST00000553486 CHRNA5P30532 468 aa18.48■□□□□ 0.55
ABCD4-218ENST00000553486 NFIXQ14938 502 aa18.48■□□□□ 0.55
ABCD4-218ENST00000553486 HSP90AB3PQ58FF7 597 aa18.48■□□□□ 0.55
ABCD4-218ENST00000553486 GBP4Q96PP9 640 aa18.48■□□□□ 0.55
ABCD4-218ENST00000553486 DDX11L8A8MPP1 907 aa18.47■□□□□ 0.55
ABCD4-218ENST00000553486 PCCAP05165 728 aaPredicted RBP18.47■□□□□ 0.55
ABCD4-218ENST00000553486 IL15P40933 162 aaPredicted RBP18.47■□□□□ 0.55
ABCD4-218ENST00000553486 GIGYF2Q6Y7W6 1299 aaKnown RBP18.47■□□□□ 0.55
ABCD4-218ENST00000553486 TNPO1Q92973 898 aaKnown RBP18.47■□□□□ 0.55
ABCD4-218ENST00000553486 GPR108Q9NPR9 543 aa18.47■□□□□ 0.55
ABCD4-218ENST00000553486 HSPA6P17066 643 aa18.46■□□□□ 0.55
ABCD4-218ENST00000553486 BCL2L12Q9HB09 334 aa18.46■□□□□ 0.55
ABCD4-218ENST00000553486 DBNLQ9UJU6 430 aaKnown RBP18.46■□□□□ 0.55
ABCD4-218ENST00000553486 NUCB2P80303 420 aa18.46■□□□□ 0.55
ABCD4-218ENST00000553486 FSD1Q9BTV5 496 aa18.46■□□□□ 0.55
ABCD4-218ENST00000553486 ANKRD36CQ5JPF3 1778 aa18.45■□□□□ 0.54
ABCD4-218ENST00000553486 CIAO1O76071 339 aa18.45■□□□□ 0.54
ABCD4-218ENST00000553486 ZBTB38Q8NAP3 1195 aaPredicted RBP18.45■□□□□ 0.54
ABCD4-218ENST00000553486 PLA2G12BQ9BX93 195 aa18.45■□□□□ 0.54
ABCD4-218ENST00000553486 EYA2O00167 538 aa18.44■□□□□ 0.54
ABCD4-218ENST00000553486 PTMSP20962 102 aa18.44■□□□□ 0.54
ABCD4-218ENST00000553486 EIF5P55010 431 aaKnown RBP18.44■□□□□ 0.54
ABCD4-218ENST00000553486 C9orf131Q5VYM1 1079 aa18.44■□□□□ 0.54
ABCD4-218ENST00000553486 ATG9AQ7Z3C6 839 aa18.44■□□□□ 0.54
ABCD4-218ENST00000553486 FBXO3Q9UK99 471 aa18.44■□□□□ 0.54
ABCD4-218ENST00000553486 SNX14Q9Y5W7 946 aa18.44■□□□□ 0.54
ABCD4-218ENST00000553486 ARFGEF1Q9Y6D6 1849 aa18.44■□□□□ 0.54
ABCD4-218ENST00000553486 IL6STP40189 918 aaPredicted RBP18.44■□□□□ 0.54
ABCD4-218ENST00000553486 TMX3Q96JJ7 454 aa18.44■□□□□ 0.54
ABCD4-218ENST00000553486 SNRKQ9NRH2 765 aa18.44■□□□□ 0.54
ABCD4-218ENST00000553486 NUP98P52948 1817 aa18.43■□□□□ 0.54
ABCD4-218ENST00000553486 NMIQ13287 307 aaPredicted RBP18.43■□□□□ 0.54
ABCD4-218ENST00000553486 CCDC57Q2TAC2 916 aa18.43■□□□□ 0.54
ABCD4-218ENST00000553486 DBNDD2Q9BQY9 259 aa18.43■□□□□ 0.54
ABCD4-218ENST00000553486 CDHR2Q9BYE9 1310 aa18.43■□□□□ 0.54
ABCD4-218ENST00000553486 RFX7Q2KHR2 1363 aa18.42■□□□□ 0.54
ABCD4-218ENST00000553486 ERVV-1B6SEH8 477 aa18.42■□□□□ 0.54
ABCD4-218ENST00000553486 SERPINB2P05120 415 aa18.42■□□□□ 0.54
ABCD4-218ENST00000553486 CCDC171Q6TFL3 1326 aa18.42■□□□□ 0.54
ABCD4-218ENST00000553486 CUL4AQ13619 759 aa18.42■□□□□ 0.54
ABCD4-218ENST00000553486 HLFQ16534 295 aa18.42■□□□□ 0.54
ABCD4-218ENST00000553486 HAUS7Q99871 368 aa18.42■□□□□ 0.54
ABCD4-218ENST00000553486 NRXN2Q9P2S2 1712 aa18.41■□□□□ 0.54
ABCD4-218ENST00000553486 TOMM70O94826 608 aa18.41■□□□□ 0.54
ABCD4-218ENST00000553486 PTH1RQ03431 593 aa18.41■□□□□ 0.54
ABCD4-218ENST00000553486 NLRP10Q86W26 655 aa18.41■□□□□ 0.54
ABCD4-218ENST00000553486 FAM89AQ96GI7 184 aa18.41■□□□□ 0.54
ABCD4-218ENST00000553486 FAM227BQ96M60 508 aa18.41■□□□□ 0.54
ABCD4-218ENST00000553486 NEUROD6Q96NK8 337 aa18.41■□□□□ 0.54
ABCD4-218ENST00000553486 UPF3BQ9BZI7 483 aaKnown RBP18.41■□□□□ 0.54
ABCD4-218ENST00000553486 NMRK2Q9NPI5 230 aa18.41■□□□□ 0.54
ABCD4-218ENST00000553486 CSF1RP07333 972 aa18.4■□□□□ 0.54
ABCD4-218ENST00000553486 CLEC17AQ6ZS10 378 aa18.4■□□□□ 0.54
ABCD4-218ENST00000553486 KCNB2Q92953 911 aa18.4■□□□□ 0.54
ABCD4-218ENST00000553486 INTS4Q96HW7 963 aaKnown RBP18.4■□□□□ 0.54
ABCD4-218ENST00000553486 ZNF594Q96JF6 807 aaPredicted RBP18.4■□□□□ 0.54
ABCD4-218ENST00000553486 MYH3P11055 1940 aa18.4■□□□□ 0.54
ABCD4-218ENST00000553486 LRRC24Q50LG9 513 aa18.39■□□□□ 0.54
ABCD4-218ENST00000553486 TICAM2Q86XR7 235 aa18.39■□□□□ 0.54
ABCD4-218ENST00000553486 DZIP3Q86Y13 1208 aaKnown RBP18.39■□□□□ 0.54
ABCD4-218ENST00000553486 RASEFQ8IZ41 740 aa18.39■□□□□ 0.54
ABCD4-218ENST00000553486 RNF181Q9P0P0 153 aa18.39■□□□□ 0.54
ABCD4-218ENST00000553486 CEP126Q9P2H0 1117 aa18.39■□□□□ 0.54
ABCD4-218ENST00000553486 GOLGA6L22H0YM25 854 aa18.39■□□□□ 0.53
ABCD4-218ENST00000553486 TRAK2O60296 914 aa18.39■□□□□ 0.53
ABCD4-218ENST00000553486 ZKSCAN1P17029 563 aaPredicted RBP18.39■□□□□ 0.53
ABCD4-218ENST00000553486 KCNJ4P48050 445 aa18.39■□□□□ 0.53
ABCD4-218ENST00000553486 IFIT5Q13325 482 aaKnown RBP18.39■□□□□ 0.53
ABCD4-218ENST00000553486 NECTIN1Q15223 517 aa18.39■□□□□ 0.53
ABCD4-218ENST00000553486 TAF7LQ5H9L4 462 aa18.39■□□□□ 0.53
ABCD4-218ENST00000553486 BICDL1Q6ZP65 573 aa18.39■□□□□ 0.53
ABCD4-218ENST00000553486 ZGPATQ8N5A5 531 aaKnown RBP18.39■□□□□ 0.53
ABCD4-218ENST00000553486 MAP4K1Q92918 833 aa18.39■□□□□ 0.53
ABCD4-218ENST00000553486 CARMIL3Q8ND23 1372 aa18.39■□□□□ 0.53
ABCD4-218ENST00000553486 A0A0D9SFI3 127 aa18.38■□□□□ 0.53
ABCD4-218ENST00000553486 GPTP24298 496 aa18.38■□□□□ 0.53
ABCD4-218ENST00000553486 PRPF40BQ6NWY9 871 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms