RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 MRS2Q9HD23 443 aa8□□□□□ -1.13
SCFD1-209ENST00000553280 RNF19AQ9NV58 838 aa8□□□□□ -1.13
SCFD1-209ENST00000553280 ELOA3CA0A087WX78 387 aaPredicted RBP7.99□□□□□ -1.13
SCFD1-209ENST00000553280 PNMA6FA0A0J9YX94 578 aa7.99□□□□□ -1.13
SCFD1-209ENST00000553280 ELOA3DA6NLF2 546 aaPredicted RBP7.99□□□□□ -1.13
SCFD1-209ENST00000553280 OPLAHO14841 1288 aa7.99□□□□□ -1.13
SCFD1-209ENST00000553280 ITGB2P05107 769 aa7.99□□□□□ -1.13
SCFD1-209ENST00000553280 NEFLP07196 543 aa7.99□□□□□ -1.13
SCFD1-209ENST00000553280 PSMD2Q13200 908 aa7.99□□□□□ -1.13
SCFD1-209ENST00000553280 ELOA3BQ3SY89 546 aa7.99□□□□□ -1.13
SCFD1-209ENST00000553280 ELOA3Q8NG57 546 aa7.99□□□□□ -1.13
SCFD1-209ENST00000553280 NUDT16Q96DE0 195 aaKnown RBP7.99□□□□□ -1.13
SCFD1-209ENST00000553280 CSRNP1Q96S65 589 aa7.99□□□□□ -1.13
SCFD1-209ENST00000553280 SETDB2Q96T68 719 aa7.99□□□□□ -1.13
SCFD1-209ENST00000553280 GGNBP2Q9H3C7 697 aa7.99□□□□□ -1.13
SCFD1-209ENST00000553280 KRBA1A5PL33 1030 aa7.98□□□□□ -1.13
SCFD1-209ENST00000553280 TGFBR3LH3BV60 316 aa7.98□□□□□ -1.13
SCFD1-209ENST00000553280 GNB5O14775 395 aa7.98□□□□□ -1.13
SCFD1-209ENST00000553280 ALAS2P22557 587 aa7.98□□□□□ -1.13
SCFD1-209ENST00000553280 HDLBPQ00341 1268 aaKnown RBP7.98□□□□□ -1.13
SCFD1-209ENST00000553280 IER5Q5VY09 327 aa7.98□□□□□ -1.13
SCFD1-209ENST00000553280 TMEM87AQ8NBN3 555 aa7.98□□□□□ -1.13
SCFD1-209ENST00000553280 TTC16Q8NEE8 873 aa7.98□□□□□ -1.13
SCFD1-209ENST00000553280 FBF1Q8TES7 1133 aa7.98□□□□□ -1.13
SCFD1-209ENST00000553280 PIK3R5Q8WYR1 880 aa7.98□□□□□ -1.13
SCFD1-209ENST00000553280 BHMTQ93088 406 aa7.98□□□□□ -1.13
SCFD1-209ENST00000553280 DNAJC25Q9H1X3 360 aa7.98□□□□□ -1.13
SCFD1-209ENST00000553280 DMGDHQ9UI17 866 aaKnown RBP7.98□□□□□ -1.13
SCFD1-209ENST00000553280 EIF1AYO14602 144 aaKnown RBP7.97□□□□□ -1.13
SCFD1-209ENST00000553280 SIN3BO75182 1162 aa7.97□□□□□ -1.13
SCFD1-209ENST00000553280 ERCC5P28715 1186 aaPredicted RBP7.97□□□□□ -1.13
SCFD1-209ENST00000553280 GNA15P30679 374 aa7.97□□□□□ -1.13
SCFD1-209ENST00000553280 KCNQ4P56696 695 aa7.97□□□□□ -1.13
SCFD1-209ENST00000553280 TBC1D8BQ0IIM8 1120 aa7.97□□□□□ -1.13
SCFD1-209ENST00000553280 NEUROD1Q13562 356 aa7.97□□□□□ -1.13
SCFD1-209ENST00000553280 C8orf34Q49A92 452 aa7.97□□□□□ -1.13
SCFD1-209ENST00000553280 FRMD6Q96NE9 622 aa7.97□□□□□ -1.13
SCFD1-209ENST00000553280 IGHA1P01876 353 aa7.96□□□□□ -1.14
SCFD1-209ENST00000553280 SUZ12Q15022 739 aaKnown RBP7.96□□□□□ -1.14
SCFD1-209ENST00000553280 IGFLR1Q9H665 355 aa7.96□□□□□ -1.14
SCFD1-209ENST00000553280 METTL5Q9NRN9 209 aaKnown RBP7.96□□□□□ -1.14
SCFD1-209ENST00000553280 VTI1BQ9UEU0 232 aa7.96□□□□□ -1.14
SCFD1-209ENST00000553280 PIK3R2O00459 728 aa7.95□□□□□ -1.14
SCFD1-209ENST00000553280 MSTNO14793 375 aa7.95□□□□□ -1.14
SCFD1-209ENST00000553280 ORC1Q13415 861 aa7.95□□□□□ -1.14
SCFD1-209ENST00000553280 NAALADL2Q58DX5 795 aa7.95□□□□□ -1.14
SCFD1-209ENST00000553280 C9orf131Q5VYM1 1079 aa7.95□□□□□ -1.14
SCFD1-209ENST00000553280 XKR5Q6UX68 686 aa7.95□□□□□ -1.14
SCFD1-209ENST00000553280 METTL16Q86W50 562 aaKnown RBP7.95□□□□□ -1.14
SCFD1-209ENST00000553280 SREK1Q8WXA9 508 aaKnown RBP7.95□□□□□ -1.14
SCFD1-209ENST00000553280 TRIM11Q96F44 468 aa7.95□□□□□ -1.14
SCFD1-209ENST00000553280 DRC1Q96MC2 740 aa7.95□□□□□ -1.14
SCFD1-209ENST00000553280 MDFIQ99750 246 aa7.95□□□□□ -1.14
SCFD1-209ENST00000553280 AK5Q9Y6K8 562 aa7.95□□□□□ -1.14
SCFD1-209ENST00000553280 ADARB2-AS1A8MUL3 147 aa7.94□□□□□ -1.14
SCFD1-209ENST00000553280 ADH7P40394 386 aa7.94□□□□□ -1.14
SCFD1-209ENST00000553280 TNFRSF25Q93038 417 aa7.94□□□□□ -1.14
SCFD1-209ENST00000553280 SPOCK3Q9BQ16 436 aa7.94□□□□□ -1.14
SCFD1-209ENST00000553280 PLVAPQ9BX97 442 aa7.94□□□□□ -1.14
SCFD1-209ENST00000553280 M0R082 166 aa7.93□□□□□ -1.14
SCFD1-209ENST00000553280 CPNE3O75131 537 aaKnown RBP7.93□□□□□ -1.14
SCFD1-209ENST00000553280 ALBP02768 609 aa7.93□□□□□ -1.14
SCFD1-209ENST00000553280 INPP5BP32019 993 aa7.93□□□□□ -1.14
SCFD1-209ENST00000553280 IDH3AP50213 366 aa7.93□□□□□ -1.14
SCFD1-209ENST00000553280 FANCCQ00597 558 aa7.93□□□□□ -1.14
SCFD1-209ENST00000553280 C8orf86Q6ZUL3 223 aa7.93□□□□□ -1.14
SCFD1-209ENST00000553280 ZNF417Q8TAU3 575 aa7.93□□□□□ -1.14
SCFD1-209ENST00000553280 ZNF587Q96SQ5 575 aaPredicted RBP7.93□□□□□ -1.14
SCFD1-209ENST00000553280 UBE2OQ9C0C9 1292 aaKnown RBP7.93□□□□□ -1.14
SCFD1-209ENST00000553280 NOP53Q9NZM5 478 aaKnown RBP7.93□□□□□ -1.14
SCFD1-209ENST00000553280 FNDC3AQ9Y2H6 1198 aaKnown RBP7.93□□□□□ -1.14
SCFD1-209ENST00000553280 A6NHS1 94 aa7.92□□□□□ -1.14
SCFD1-209ENST00000553280 ARSDP51689 593 aa7.92□□□□□ -1.14
SCFD1-209ENST00000553280 RAD51AP2Q09MP3 1159 aa7.92□□□□□ -1.14
SCFD1-209ENST00000553280 NT5DC4Q86YG4 428 aa7.92□□□□□ -1.14
SCFD1-209ENST00000553280 RNF34Q969K3 372 aa7.92□□□□□ -1.14
SCFD1-209ENST00000553280 PNMA5Q96PV4 448 aa7.92□□□□□ -1.14
SCFD1-209ENST00000553280 GSX2Q9BZM3 304 aa7.92□□□□□ -1.14
SCFD1-209ENST00000553280 RTCBQ9Y3I0 505 aaKnown RBP7.92□□□□□ -1.14
SCFD1-209ENST00000553280 STARD13Q9Y3M8 1113 aa7.92□□□□□ -1.14
SCFD1-209ENST00000553280 TNFRSF21O75509 655 aa7.91□□□□□ -1.14
SCFD1-209ENST00000553280 PROCP04070 461 aa7.91□□□□□ -1.14
SCFD1-209ENST00000553280 NFKB1P19838 968 aa7.91□□□□□ -1.14
SCFD1-209ENST00000553280 GRNP28799 593 aaKnown RBP7.91□□□□□ -1.14
SCFD1-209ENST00000553280 PDE12Q6L8Q7 609 aaKnown RBP7.91□□□□□ -1.14
SCFD1-209ENST00000553280 KRT25Q7Z3Z0 450 aa7.91□□□□□ -1.14
SCFD1-209ENST00000553280 ALYREFQ86V81 257 aaKnown RBP7.91□□□□□ -1.14
SCFD1-209ENST00000553280 SPG7Q9UQ90 795 aa7.91□□□□□ -1.14
SCFD1-209ENST00000553280 USP20Q9Y2K6 914 aa7.91□□□□□ -1.14
SCFD1-209ENST00000553280 GIPC1O14908 333 aa7.9□□□□□ -1.14
SCFD1-209ENST00000553280 CTSHP09668 335 aa7.9□□□□□ -1.14
SCFD1-209ENST00000553280 EPB42P16452 691 aa7.9□□□□□ -1.14
SCFD1-209ENST00000553280 ZNF76P36508 570 aa7.9□□□□□ -1.14
SCFD1-209ENST00000553280 CCINQ13939 588 aa7.9□□□□□ -1.14
SCFD1-209ENST00000553280 MICALL1Q8N3F8 863 aa7.9□□□□□ -1.14
SCFD1-209ENST00000553280 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.9□□□□□ -1.14
SCFD1-209ENST00000553280 C1QTNF9BB2RNN3 333 aa7.89□□□□□ -1.15
SCFD1-209ENST00000553280 SF3A1Q15459 793 aaKnown RBP7.89□□□□□ -1.15
SCFD1-209ENST00000553280 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.89□□□□□ -1.15
SCFD1-209ENST00000553280 ZNF438Q7Z4V0 828 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms