RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 LINS1Q8NG48 757 aa20.27■□□□□ 0.84
CDK4-215ENST00000553237 CDC5LQ99459 802 aaKnown RBP20.27■□□□□ 0.84
CDK4-215ENST00000553237 KCNQ5Q9NR82 932 aa20.27■□□□□ 0.84
CDK4-215ENST00000553237 PODXL2Q9NZ53 605 aa20.27■□□□□ 0.84
CDK4-215ENST00000553237 GGA1Q9UJY5 639 aa20.27■□□□□ 0.84
CDK4-215ENST00000553237 ZBTB12Q9Y330 459 aaPredicted RBP20.27■□□□□ 0.84
CDK4-215ENST00000553237 TMEM88BA6NKF7 163 aa20.26■□□□□ 0.83
CDK4-215ENST00000553237 PSMD14O00487 310 aa20.26■□□□□ 0.83
CDK4-215ENST00000553237 ECE2O60344 883 aa20.26■□□□□ 0.83
CDK4-215ENST00000553237 ZNF521Q96K83 1311 aa20.26■□□□□ 0.83
CDK4-215ENST00000553237 SHTN1A0MZ66 631 aa20.25■□□□□ 0.83
CDK4-215ENST00000553237 G3V3G9 751 aa20.25■□□□□ 0.83
CDK4-215ENST00000553237 FMR1Q06787 632 aaKnown RBP eCLIP20.25■□□□□ 0.832e-6■□□□□ 10.3
CDK4-215ENST00000553237 DCAF8Q5TAQ9 597 aa20.25■□□□□ 0.83
CDK4-215ENST00000553237 CNOT7Q9UIV1 285 aaKnown RBP20.25■□□□□ 0.83
CDK4-215ENST00000553237 CASP7P55210 303 aa20.24■□□□□ 0.83
CDK4-215ENST00000553237 WTIPA6NIX2 430 aaPredicted RBP20.23■□□□□ 0.83
CDK4-215ENST00000553237 BEND3Q5T5X7 828 aa20.23■□□□□ 0.83
CDK4-215ENST00000553237 MICALL2Q8IY33 904 aa20.23■□□□□ 0.83
CDK4-215ENST00000553237 PLA2G12BQ9BX93 195 aa20.23■□□□□ 0.83
CDK4-215ENST00000553237 BSDC1Q9NW68 430 aaPredicted RBP20.23■□□□□ 0.83
CDK4-215ENST00000553237 XDHP47989 1333 aa20.23■□□□□ 0.83
CDK4-215ENST00000553237 H7C1D1 291 aa20.22■□□□□ 0.83
CDK4-215ENST00000553237 TRAF5O00463 557 aa20.22■□□□□ 0.83
CDK4-215ENST00000553237 ATP2B4P23634 1241 aa20.22■□□□□ 0.83
CDK4-215ENST00000553237 HIRAP54198 1017 aaPredicted RBP20.22■□□□□ 0.83
CDK4-215ENST00000553237 TRPM4Q8TD43 1214 aa20.22■□□□□ 0.83
CDK4-215ENST00000553237 MINPP1Q9UNW1 487 aa20.22■□□□□ 0.83
CDK4-215ENST00000553237 RTL9Q8NET4 1388 aa20.21■□□□□ 0.83
CDK4-215ENST00000553237 ITGA6P23229 1130 aa20.21■□□□□ 0.83
CDK4-215ENST00000553237 IGHMBP2P38935 993 aaKnown RBP20.21■□□□□ 0.83
CDK4-215ENST00000553237 FAM161AQ3B820 660 aa20.21■□□□□ 0.83
CDK4-215ENST00000553237 CACNA1FO60840 1977 aa20.21■□□□□ 0.83
CDK4-215ENST00000553237 CNTNAP1P78357 1384 aa20.21■□□□□ 0.83
CDK4-215ENST00000553237 CSF1RP07333 972 aa20.2■□□□□ 0.82
CDK4-215ENST00000553237 SLC4A10Q6U841 1118 aa20.2■□□□□ 0.82
CDK4-215ENST00000553237 SAMD7Q7Z3H4 446 aa20.2■□□□□ 0.82
CDK4-215ENST00000553237 DPF2Q92785 391 aa20.2■□□□□ 0.82
CDK4-215ENST00000553237 ABT1Q9ULW3 272 aaKnown RBP20.19■□□□□ 0.82
CDK4-215ENST00000553237 E9PSI1 815 aa20.18■□□□□ 0.82
CDK4-215ENST00000553237 HSPA1AP0DMV8 641 aaKnown RBP20.18■□□□□ 0.82
CDK4-215ENST00000553237 HSPA1BP0DMV9 641 aaKnown RBP20.18■□□□□ 0.82
CDK4-215ENST00000553237 VEGFBP49765 207 aa20.18■□□□□ 0.82
CDK4-215ENST00000553237 TBC1D10BQ4KMP7 808 aaPredicted RBP20.18■□□□□ 0.82
CDK4-215ENST00000553237 RBM26Q5T8P6 1007 aaKnown RBP20.18■□□□□ 0.82
CDK4-215ENST00000553237 MPHOSPH8Q99549 860 aa20.18■□□□□ 0.82
CDK4-215ENST00000553237 GLIS2Q9BZE0 524 aaPredicted RBP20.18■□□□□ 0.82
CDK4-215ENST00000553237 CHMP3Q9Y3E7 222 aa20.18■□□□□ 0.82
CDK4-215ENST00000553237 MYH3P11055 1940 aa20.17■□□□□ 0.82
CDK4-215ENST00000553237 VIL1P09327 827 aaKnown RBP20.17■□□□□ 0.82
CDK4-215ENST00000553237 RPS12P25398 132 aaKnown RBP20.17■□□□□ 0.82
CDK4-215ENST00000553237 CCT4P50991 539 aaKnown RBP20.17■□□□□ 0.82
CDK4-215ENST00000553237 FOXO4P98177 505 aa20.17■□□□□ 0.82
CDK4-215ENST00000553237 SLFN5Q08AF3 891 aa20.17■□□□□ 0.82
CDK4-215ENST00000553237 DEFB115Q30KQ5 88 aa20.17■□□□□ 0.82
CDK4-215ENST00000553237 CST9Q5W186 159 aa20.17■□□□□ 0.82
CDK4-215ENST00000553237 PGAP2Q9UHJ9 254 aa20.17■□□□□ 0.82
CDK4-215ENST00000553237 ANKRD18BA2A2Z9 1011 aa20.16■□□□□ 0.82
CDK4-215ENST00000553237 GRM8O00222 908 aa20.16■□□□□ 0.82
CDK4-215ENST00000553237 EGFRP00533 1210 aa20.16■□□□□ 0.82
CDK4-215ENST00000553237 EPHA10Q5JZY3 1008 aa20.16■□□□□ 0.82
CDK4-215ENST00000553237 DIEXFQ68CQ4 756 aaKnown RBP20.16■□□□□ 0.82
CDK4-215ENST00000553237 MRPL50Q8N5N7 158 aaKnown RBP20.16■□□□□ 0.82
CDK4-215ENST00000553237 ZC3H15Q8WU90 426 aaKnown RBP20.16■□□□□ 0.82
CDK4-215ENST00000553237 CDCA7LQ96GN5 454 aa20.16■□□□□ 0.82
CDK4-215ENST00000553237 C9orf78Q9NZ63 289 aaPredicted RBP20.16■□□□□ 0.82
CDK4-215ENST00000553237 CCER2I3L3R5 266 aa20.15■□□□□ 0.82
CDK4-215ENST00000553237 SRCIN1Q9C0H9 1055 aa20.15■□□□□ 0.82
CDK4-215ENST00000553237 SPEF2Q9C093 1822 aa20.15■□□□□ 0.82
CDK4-215ENST00000553237 SCN9AQ15858 1988 aa20.14■□□□□ 0.81
CDK4-215ENST00000553237 RASSF10A6NK89 507 aa20.14■□□□□ 0.81
CDK4-215ENST00000553237 ALDH1L1O75891 902 aa20.14■□□□□ 0.81
CDK4-215ENST00000553237 IFIT5Q13325 482 aaKnown RBP20.14■□□□□ 0.81
CDK4-215ENST00000553237 RSBN1LQ6PCB5 846 aaPredicted RBP20.14■□□□□ 0.81
CDK4-215ENST00000553237 LMBR1LQ6UX01 489 aa20.14■□□□□ 0.81
CDK4-215ENST00000553237 USP48Q86UV5 1035 aa20.14■□□□□ 0.81
CDK4-215ENST00000553237 LEMD3Q9Y2U8 911 aa20.14■□□□□ 0.81
CDK4-215ENST00000553237 PCNTO95613 3336 aa20.14■□□□□ 0.81
CDK4-215ENST00000553237 CELF2O95319 508 aaKnown RBP20.13■□□□□ 0.81
CDK4-215ENST00000553237 CHRNDQ07001 517 aa20.13■□□□□ 0.81
CDK4-215ENST00000553237 IFFO2Q5TF58 517 aa20.13■□□□□ 0.81
CDK4-215ENST00000553237 DLK2Q6UY11 383 aa20.13■□□□□ 0.81
CDK4-215ENST00000553237 CDC37L1Q7L3B6 337 aa20.13■□□□□ 0.81
CDK4-215ENST00000553237 PODNQ7Z5L7 613 aa20.13■□□□□ 0.81
CDK4-215ENST00000553237 TXNRD3Q86VQ6 643 aa20.13■□□□□ 0.81
CDK4-215ENST00000553237 SSH1Q8WYL5 1049 aa20.13■□□□□ 0.81
CDK4-215ENST00000553237 ANKRD2Q9GZV1 360 aa20.13■□□□□ 0.81
CDK4-215ENST00000553237 ZNF408Q9H9D4 720 aa20.13■□□□□ 0.81
CDK4-215ENST00000553237 MED23Q9ULK4 1368 aa20.12■□□□□ 0.81
CDK4-215ENST00000553237 ZNF804BA4D1E1 1349 aa20.12■□□□□ 0.81
CDK4-215ENST00000553237 USP17L3A6NCW0 530 aa20.12■□□□□ 0.81
CDK4-215ENST00000553237 USP17L4A6NCW7 530 aa20.12■□□□□ 0.81
CDK4-215ENST00000553237 KLRK1P26718 216 aa20.12■□□□□ 0.81
CDK4-215ENST00000553237 KIF4BQ2VIQ3 1234 aa20.12■□□□□ 0.81
CDK4-215ENST00000553237 COL13A1Q5TAT6 717 aaPredicted RBP20.12■□□□□ 0.81
CDK4-215ENST00000553237 PAXIP1Q6ZW49 1069 aaPredicted RBP20.12■□□□□ 0.81
CDK4-215ENST00000553237 USP17L1Q7RTZ2 530 aa20.12■□□□□ 0.81
CDK4-215ENST00000553237 HELBQ8NG08 1087 aaPredicted RBP20.12■□□□□ 0.81
CDK4-215ENST00000553237 FBXW7Q969H0 707 aa20.12■□□□□ 0.81
CDK4-215ENST00000553237 SNAP23O00161 211 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms