RNA–Protein interactions for RNA: ENST00000553217.5

TMEM106C-221, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-221ENST00000553217 DDX41Q9UJV9 622 aaKnown RBP6.65□□□□□ -1.34
TMEM106C-221ENST00000553217 PCDHB15Q9Y5E8 787 aa6.65□□□□□ -1.34
TMEM106C-221ENST00000553217 AOX1Q06278 1338 aa6.65□□□□□ -1.35
TMEM106C-221ENST00000553217 SOS1Q07889 1333 aaPredicted RBP6.65□□□□□ -1.35
TMEM106C-221ENST00000553217 COL15A1P39059 1388 aa6.65□□□□□ -1.35
TMEM106C-221ENST00000553217 COL3A1P02461 1466 aaPredicted RBP6.65□□□□□ -1.35
TMEM106C-221ENST00000553217 MRC1P22897 1456 aa6.65□□□□□ -1.35
TMEM106C-221ENST00000553217 ARFGEF1Q9Y6D6 1849 aa6.64□□□□□ -1.35
TMEM106C-221ENST00000553217 CCDC88AQ3V6T2 1871 aa6.64□□□□□ -1.35
TMEM106C-221ENST00000553217 GOLGA6L9A6NEM1 432 aa6.64□□□□□ -1.35
TMEM106C-221ENST00000553217 ERC2O15083 957 aa6.64□□□□□ -1.35
TMEM106C-221ENST00000553217 MYO1BO43795 1136 aa6.64□□□□□ -1.35
TMEM106C-221ENST00000553217 DIAPH1O60610 1272 aaKnown RBP6.64□□□□□ -1.35
TMEM106C-221ENST00000553217 KDM4AO75164 1064 aa6.64□□□□□ -1.35
TMEM106C-221ENST00000553217 CYP19A1P11511 503 aaPredicted RBP6.64□□□□□ -1.35
TMEM106C-221ENST00000553217 TUBB2AQ13885 445 aa6.64□□□□□ -1.35
TMEM106C-221ENST00000553217 NFIXQ14938 502 aa6.64□□□□□ -1.35
TMEM106C-221ENST00000553217 MSL3Q8N5Y2 521 aaKnown RBP6.64□□□□□ -1.35
TMEM106C-221ENST00000553217 KIAA1524Q8TCG1 905 aa6.64□□□□□ -1.35
TMEM106C-221ENST00000553217 ZNF622Q969S3 477 aaKnown RBP eCLIP6.64□□□□□ -1.35
TMEM106C-221ENST00000553217 DDX11Q96FC9 970 aa6.64□□□□□ -1.35
TMEM106C-221ENST00000553217 TUBB2BQ9BVA1 445 aa6.64□□□□□ -1.35
TMEM106C-221ENST00000553217 ACBD3Q9H3P7 528 aa6.64□□□□□ -1.35
TMEM106C-221ENST00000553217 BCCIPQ9P287 314 aaKnown RBP eCLIP6.64□□□□□ -1.35
TMEM106C-221ENST00000553217 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.64□□□□□ -1.35
TMEM106C-221ENST00000553217 COL11A2P13942 1736 aaPredicted RBP6.64□□□□□ -1.35
TMEM106C-221ENST00000553217 UBR2Q8IWV8 1755 aa6.64□□□□□ -1.35
TMEM106C-221ENST00000553217 SBF1O95248 1867 aa6.64□□□□□ -1.35
TMEM106C-221ENST00000553217 ANKRD31Q8N7Z5 1873 aa6.64□□□□□ -1.35
TMEM106C-221ENST00000553217 CTAGE5O15320 804 aa6.63□□□□□ -1.35
TMEM106C-221ENST00000553217 ZPR1O75312 459 aa6.63□□□□□ -1.35
TMEM106C-221ENST00000553217 BRD1O95696 1058 aa6.63□□□□□ -1.35
TMEM106C-221ENST00000553217 A1BGP04217 495 aa6.63□□□□□ -1.35
TMEM106C-221ENST00000553217 TM4SF1P30408 202 aa6.63□□□□□ -1.35
TMEM106C-221ENST00000553217 TGFB2P61812 414 aa6.63□□□□□ -1.35
TMEM106C-221ENST00000553217 GNAI1P63096 354 aa6.63□□□□□ -1.35
TMEM106C-221ENST00000553217 CUL4AQ13619 759 aa6.63□□□□□ -1.35
TMEM106C-221ENST00000553217 DCTN1Q14203 1278 aa6.63□□□□□ -1.35
TMEM106C-221ENST00000553217 TERF2Q15554 542 aa6.63□□□□□ -1.35
TMEM106C-221ENST00000553217 TBC1D9BQ66K14 1250 aa6.63□□□□□ -1.35
TMEM106C-221ENST00000553217 TBC1D9Q6ZT07 1266 aa6.63□□□□□ -1.35
TMEM106C-221ENST00000553217 FILIP1Q7Z7B0 1213 aa6.63□□□□□ -1.35
TMEM106C-221ENST00000553217 SLC51AQ86UW1 340 aa6.63□□□□□ -1.35
TMEM106C-221ENST00000553217 IL17REQ8NFR9 667 aa6.63□□□□□ -1.35
TMEM106C-221ENST00000553217 KIF18AQ8NI77 898 aa6.63□□□□□ -1.35
TMEM106C-221ENST00000553217 ZNF496Q96IT1 587 aaPredicted RBP6.63□□□□□ -1.35
TMEM106C-221ENST00000553217 PHACTR3Q96KR7 559 aa6.63□□□□□ -1.35
TMEM106C-221ENST00000553217 ZSCAN31Q96LW9 406 aaPredicted RBP6.63□□□□□ -1.35
TMEM106C-221ENST00000553217 RBSNQ9H1K0 784 aa6.63□□□□□ -1.35
TMEM106C-221ENST00000553217 OSBPL3Q9H4L5 887 aa6.63□□□□□ -1.35
TMEM106C-221ENST00000553217 RRAGCQ9HB90 399 aa6.63□□□□□ -1.35
TMEM106C-221ENST00000553217 PIM2Q9P1W9 311 aa6.63□□□□□ -1.35
TMEM106C-221ENST00000553217 TBC1D2BQ9UPU7 963 aa6.63□□□□□ -1.35
TMEM106C-221ENST00000553217 HDAC5Q9UQL6 1122 aa6.63□□□□□ -1.35
TMEM106C-221ENST00000553217 AK9Q5TCS8 1911 aa6.62□□□□□ -1.35
TMEM106C-221ENST00000553217 SIPA1L3O60292 1781 aaPredicted RBP6.62□□□□□ -1.35
TMEM106C-221ENST00000553217 FAM177BA6PVY3 158 aa6.62□□□□□ -1.35
TMEM106C-221ENST00000553217 POTEB2H3BUK9 544 aa6.62□□□□□ -1.35
TMEM106C-221ENST00000553217 TULP2O00295 520 aa6.62□□□□□ -1.35
TMEM106C-221ENST00000553217 KIF1CO43896 1103 aaKnown RBP6.62□□□□□ -1.35
TMEM106C-221ENST00000553217 PRPF40AO75400 957 aaKnown RBP6.62□□□□□ -1.35
TMEM106C-221ENST00000553217 SERPINB2P05120 415 aa6.62□□□□□ -1.35
TMEM106C-221ENST00000553217 TRIM27P14373 513 aa6.62□□□□□ -1.35
TMEM106C-221ENST00000553217 PRKAR2BP31323 418 aa6.62□□□□□ -1.35
TMEM106C-221ENST00000553217 TRDNQ13061 729 aa6.62□□□□□ -1.35
TMEM106C-221ENST00000553217 DALRD3Q5D0E6 543 aaKnown RBP6.62□□□□□ -1.35
TMEM106C-221ENST00000553217 ATL3Q6DD88 541 aa6.62□□□□□ -1.35
TMEM106C-221ENST00000553217 FAM200AQ8TCP9 573 aa6.62□□□□□ -1.35
TMEM106C-221ENST00000553217 SCAND2PQ9GZW5 306 aaPredicted RBP6.62□□□□□ -1.35
TMEM106C-221ENST00000553217 NAT10Q9H0A0 1025 aaKnown RBP6.62□□□□□ -1.35
TMEM106C-221ENST00000553217 SH2B1Q9NRF2 756 aaPredicted RBP6.62□□□□□ -1.35
TMEM106C-221ENST00000553217 PSD3Q9NYI0 1048 aa6.62□□□□□ -1.35
TMEM106C-221ENST00000553217 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.62□□□□□ -1.35
TMEM106C-221ENST00000553217 TIAM2Q8IVF5 1701 aa6.62□□□□□ -1.35
TMEM106C-221ENST00000553217 WDR90Q96KV7 1748 aa6.62□□□□□ -1.35
TMEM106C-221ENST00000553217 NRXN2Q9P2S2 1712 aa6.62□□□□□ -1.35
TMEM106C-221ENST00000553217 PTPRCP08575 1304 aa6.61□□□□□ -1.35
TMEM106C-221ENST00000553217 SYCE3A1L190 88 aa6.61□□□□□ -1.35
TMEM106C-221ENST00000553217 GTF2E1P29083 439 aaPredicted RBP6.61□□□□□ -1.35
TMEM106C-221ENST00000553217 TTC22Q5TAA0 569 aa6.61□□□□□ -1.35
TMEM106C-221ENST00000553217 MCM10Q7L590 875 aa6.61□□□□□ -1.35
TMEM106C-221ENST00000553217 TICAM2Q86XR7 235 aa6.61□□□□□ -1.35
TMEM106C-221ENST00000553217 C2CD5Q86YS7 1000 aa6.61□□□□□ -1.35
TMEM106C-221ENST00000553217 TTC5Q8N0Z6 440 aa6.61□□□□□ -1.35
TMEM106C-221ENST00000553217 RGS22Q8NE09 1264 aa6.61□□□□□ -1.35
TMEM106C-221ENST00000553217 USP26Q9BXU7 913 aa6.61□□□□□ -1.35
TMEM106C-221ENST00000553217 RASSF4Q9H2L5 321 aa6.61□□□□□ -1.35
TMEM106C-221ENST00000553217 DDX19AQ9NUU7 478 aaKnown RBP6.61□□□□□ -1.35
TMEM106C-221ENST00000553217 MIS18AQ9NYP9 233 aa6.61□□□□□ -1.35
TMEM106C-221ENST00000553217 IMPACTQ9P2X3 320 aa6.61□□□□□ -1.35
TMEM106C-221ENST00000553217 NARFQ9UHQ1 456 aa6.61□□□□□ -1.35
TMEM106C-221ENST00000553217 CTNNA3Q9UI47 895 aa6.61□□□□□ -1.35
TMEM106C-221ENST00000553217 ZHX1Q9UKY1 873 aaPredicted RBP6.61□□□□□ -1.35
TMEM106C-221ENST00000553217 DLEC1Q9Y238 1755 aa6.61□□□□□ -1.35
TMEM106C-221ENST00000553217 SCN7AQ01118 1682 aa6.61□□□□□ -1.35
TMEM106C-221ENST00000553217 NFKBIEO00221 500 aa6.6□□□□□ -1.35
TMEM106C-221ENST00000553217 EIF3JO75822 258 aaKnown RBP6.6□□□□□ -1.35
TMEM106C-221ENST00000553217 ADCY5O95622 1261 aa6.6□□□□□ -1.35
TMEM106C-221ENST00000553217 BRD2P25440 801 aaKnown RBP6.6□□□□□ -1.35
TMEM106C-221ENST00000553217 CBX1P83916 185 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms