RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 ZNF831Q5JPB2 1677 aa9.96□□□□□ -0.82
RAB5B-210ENST00000553116 NTSR2O95665 410 aa9.96□□□□□ -0.82
RAB5B-210ENST00000553116 ADORA1P30542 326 aa9.96□□□□□ -0.82
RAB5B-210ENST00000553116 IGHMBP2P38935 993 aaKnown RBP9.96□□□□□ -0.82
RAB5B-210ENST00000553116 CHMP5Q9NZZ3 219 aa9.96□□□□□ -0.82
RAB5B-210ENST00000553116 SRP68Q9UHB9 627 aaKnown RBP9.96□□□□□ -0.82
RAB5B-210ENST00000553116 BCORQ6W2J9 1755 aa9.96□□□□□ -0.82
RAB5B-210ENST00000553116 EPB41L2O43491 1005 aaKnown RBP9.95□□□□□ -0.82
RAB5B-210ENST00000553116 RPS6KA4O75676 772 aa9.95□□□□□ -0.82
RAB5B-210ENST00000553116 HSPA4P34932 840 aa9.95□□□□□ -0.82
RAB5B-210ENST00000553116 PRPF40BQ6NWY9 871 aaKnown RBP9.95□□□□□ -0.82
RAB5B-210ENST00000553116 KRT27Q7Z3Y8 459 aa9.95□□□□□ -0.82
RAB5B-210ENST00000553116 SNRKQ9NRH2 765 aa9.95□□□□□ -0.82
RAB5B-210ENST00000553116 CCDC171Q6TFL3 1326 aa9.95□□□□□ -0.82
RAB5B-210ENST00000553116 RC3H1Q5TC82 1133 aaKnown RBP9.95□□□□□ -0.82
RAB5B-210ENST00000553116 HELBQ8NG08 1087 aaPredicted RBP9.95□□□□□ -0.82
RAB5B-210ENST00000553116 SETDB2Q96T68 719 aa9.95□□□□□ -0.82
RAB5B-210ENST00000553116 ZKSCAN1P17029 563 aaPredicted RBP9.95□□□□□ -0.82
RAB5B-210ENST00000553116 RFC4P35249 363 aa9.95□□□□□ -0.82
RAB5B-210ENST00000553116 PTH1RQ03431 593 aa9.95□□□□□ -0.82
RAB5B-210ENST00000553116 BCL11BQ9C0K0 894 aaPredicted RBP9.95□□□□□ -0.82
RAB5B-210ENST00000553116 ANTXR1Q9H6X2 564 aa9.95□□□□□ -0.82
RAB5B-210ENST00000553116 SEC31BQ9NQW1 1179 aa9.95□□□□□ -0.82
RAB5B-210ENST00000553116 NARFQ9UHQ1 456 aa9.95□□□□□ -0.82
RAB5B-210ENST00000553116 RIPOR2Q9Y4F9 1068 aa9.95□□□□□ -0.82
RAB5B-210ENST00000553116 RIC1Q4ADV7 1423 aa9.95□□□□□ -0.82
RAB5B-210ENST00000553116 SPEF2Q9C093 1822 aa9.94□□□□□ -0.82
RAB5B-210ENST00000553116 ONECUT3O60422 494 aaPredicted RBP9.94□□□□□ -0.82
RAB5B-210ENST00000553116 TRIM37O94972 964 aa9.94□□□□□ -0.82
RAB5B-210ENST00000553116 ERFEQ4G0M1 354 aa9.94□□□□□ -0.82
RAB5B-210ENST00000553116 TBC1D9BQ66K14 1250 aa9.94□□□□□ -0.82
RAB5B-210ENST00000553116 FAM196AQ6ZSG2 479 aa9.94□□□□□ -0.82
RAB5B-210ENST00000553116 NBPF5PQ86XG9 351 aaPredicted RBP9.94□□□□□ -0.82
RAB5B-210ENST00000553116 KBTBD3Q8NAB2 608 aa9.94□□□□□ -0.82
RAB5B-210ENST00000553116 FRAT2O75474 233 aaPredicted RBP9.94□□□□□ -0.82
RAB5B-210ENST00000553116 MROH5Q6ZUA9 1318 aa9.94□□□□□ -0.82
RAB5B-210ENST00000553116 RBM8AQ9Y5S9 174 aaKnown RBP9.94□□□□□ -0.82
RAB5B-210ENST00000553116 SNX14Q9Y5W7 946 aa9.94□□□□□ -0.82
RAB5B-210ENST00000553116 DDX60Q8IY21 1712 aaKnown RBP9.93□□□□□ -0.82
RAB5B-210ENST00000553116 PDE8BO95263 885 aa9.93□□□□□ -0.82
RAB5B-210ENST00000553116 MCM2P49736 904 aa9.93□□□□□ -0.82
RAB5B-210ENST00000553116 LRRFIP1Q32MZ4 808 aaKnown RBP9.93□□□□□ -0.82
RAB5B-210ENST00000553116 TRAPPC3LQ5T215 181 aa9.93□□□□□ -0.82
RAB5B-210ENST00000553116 CDC5LQ99459 802 aaKnown RBP9.93□□□□□ -0.82
RAB5B-210ENST00000553116 NYXQ9GZU5 481 aa9.93□□□□□ -0.82
RAB5B-210ENST00000553116 LY75O60449 1722 aa9.93□□□□□ -0.82
RAB5B-210ENST00000553116 TAF1LQ8IZX4 1826 aa9.93□□□□□ -0.82
RAB5B-210ENST00000553116 SCN7AQ01118 1682 aa9.93□□□□□ -0.82
RAB5B-210ENST00000553116 CASTP20810 708 aaKnown RBP9.93□□□□□ -0.82
RAB5B-210ENST00000553116 RNF20Q5VTR2 975 aa9.93□□□□□ -0.82
RAB5B-210ENST00000553116 CCDC129Q6ZRS4 1044 aa9.93□□□□□ -0.82
RAB5B-210ENST00000553116 ZNF589Q86UQ0 364 aaPredicted RBP9.93□□□□□ -0.82
RAB5B-210ENST00000553116 ARHGEF1Q92888 912 aaKnown RBP9.93□□□□□ -0.82
RAB5B-210ENST00000553116 BRWD3Q6RI45 1802 aa9.93□□□□□ -0.82
RAB5B-210ENST00000553116 TAF5LO75529 589 aa9.92□□□□□ -0.82
RAB5B-210ENST00000553116 CHGBP05060 677 aa9.92□□□□□ -0.82
RAB5B-210ENST00000553116 SLC5A1P13866 664 aa9.92□□□□□ -0.82
RAB5B-210ENST00000553116 PUM3Q15397 648 aaKnown RBP9.92□□□□□ -0.82
RAB5B-210ENST00000553116 RASEFQ8IZ41 740 aa9.92□□□□□ -0.82
RAB5B-210ENST00000553116 JAKMIP1Q96N16 626 aaKnown RBP9.92□□□□□ -0.82
RAB5B-210ENST00000553116 RFX7Q2KHR2 1363 aa9.92□□□□□ -0.82
RAB5B-210ENST00000553116 WASHC4Q2M389 1173 aa9.92□□□□□ -0.82
RAB5B-210ENST00000553116 MCMDC2Q4G0Z9 681 aa9.92□□□□□ -0.82
RAB5B-210ENST00000553116 CCDC24Q8N4L8 307 aa9.92□□□□□ -0.82
RAB5B-210ENST00000553116 SEC62Q99442 399 aaKnown RBP9.92□□□□□ -0.82
RAB5B-210ENST00000553116 C4BP0C0L5 1744 aa9.92□□□□□ -0.82
RAB5B-210ENST00000553116 ZNF772Q68DY9 489 aaPredicted RBP9.92□□□□□ -0.82
RAB5B-210ENST00000553116 ANKRD18AQ8IVF6 992 aa9.92□□□□□ -0.82
RAB5B-210ENST00000553116 LAMB2P55268 1798 aa9.92□□□□□ -0.82
RAB5B-210ENST00000553116 MED23Q9ULK4 1368 aa9.91□□□□□ -0.82
RAB5B-210ENST00000553116 CREB3L3Q68CJ9 461 aa9.91□□□□□ -0.82
RAB5B-210ENST00000553116 PI16Q6UXB8 463 aa9.91□□□□□ -0.82
RAB5B-210ENST00000553116 LPIN2Q92539 896 aa9.91□□□□□ -0.82
RAB5B-210ENST00000553116 ZAP70P43403 619 aa9.91□□□□□ -0.82
RAB5B-210ENST00000553116 RBM6P78332 1123 aaKnown RBP9.91□□□□□ -0.82
RAB5B-210ENST00000553116 TPTE2Q6XPS3 522 aa9.91□□□□□ -0.82
RAB5B-210ENST00000553116 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.91□□□□□ -0.82
RAB5B-210ENST00000553116 NLRP3Q96P20 1036 aa9.91□□□□□ -0.82
RAB5B-210ENST00000553116 BCL2L12Q9HB09 334 aa9.91□□□□□ -0.82
RAB5B-210ENST00000553116 SCARF1Q14162 830 aa9.9□□□□□ -0.82
RAB5B-210ENST00000553116 SLFNL1Q499Z3 407 aa9.9□□□□□ -0.82
RAB5B-210ENST00000553116 AMIGO3Q86WK7 504 aa9.9□□□□□ -0.82
RAB5B-210ENST00000553116 MAP4K1Q92918 833 aa9.9□□□□□ -0.82
RAB5B-210ENST00000553116 TMX3Q96JJ7 454 aa9.9□□□□□ -0.82
RAB5B-210ENST00000553116 CIZ1Q9ULV3 898 aaPredicted RBP9.9□□□□□ -0.82
RAB5B-210ENST00000553116 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.9□□□□□ -0.82
RAB5B-210ENST00000553116 SNAP23O00161 211 aa9.9□□□□□ -0.82
RAB5B-210ENST00000553116 RNF113AO15541 343 aaKnown RBP9.9□□□□□ -0.82
RAB5B-210ENST00000553116 VGLL2Q8N8G2 317 aa9.9□□□□□ -0.82
RAB5B-210ENST00000553116 LRRC4BQ9NT99 713 aa9.9□□□□□ -0.82
RAB5B-210ENST00000553116 CYP46A1Q9Y6A2 500 aa9.9□□□□□ -0.82
RAB5B-210ENST00000553116 CPA1P15085 419 aa9.9□□□□□ -0.83
RAB5B-210ENST00000553116 MCAMP43121 646 aa9.9□□□□□ -0.83
RAB5B-210ENST00000553116 PHKA1P46020 1223 aa9.9□□□□□ -0.83
RAB5B-210ENST00000553116 CCDC102BQ68D86 513 aa9.9□□□□□ -0.83
RAB5B-210ENST00000553116 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.9□□□□□ -0.83
RAB5B-210ENST00000553116 ABCC12Q96J65 1359 aa9.9□□□□□ -0.83
RAB5B-210ENST00000553116 SLC27A2O14975 620 aa9.89□□□□□ -0.83
RAB5B-210ENST00000553116 IDH1O75874 414 aaKnown RBP9.89□□□□□ -0.83
RAB5B-210ENST00000553116 UQCRFS1P1P0C7P4 283 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms