RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 OTUD7BQ6GQQ9 843 aa6.99□□□□□ -1.29
CKAP4-203ENST00000553039 GPR153Q6NV75 609 aa6.99□□□□□ -1.29
CKAP4-203ENST00000553039 DLK2Q6UY11 383 aa6.99□□□□□ -1.29
CKAP4-203ENST00000553039 DPP8Q6V1X1 898 aaPredicted RBP6.99□□□□□ -1.29
CKAP4-203ENST00000553039 OTOP1Q7RTM1 612 aa6.99□□□□□ -1.29
CKAP4-203ENST00000553039 IFNL1Q8IU54 200 aa6.99□□□□□ -1.29
CKAP4-203ENST00000553039 SP8Q8IXZ3 490 aa6.99□□□□□ -1.29
CKAP4-203ENST00000553039 MPNDQ8N594 471 aa6.99□□□□□ -1.29
CKAP4-203ENST00000553039 NECTIN2Q92692 538 aa6.99□□□□□ -1.29
CKAP4-203ENST00000553039 ERO1AQ96HE7 468 aa6.99□□□□□ -1.29
CKAP4-203ENST00000553039 MS4A4AQ96JQ5 239 aa6.99□□□□□ -1.29
CKAP4-203ENST00000553039 RTFDC1Q9BY42 306 aaPredicted RBP6.99□□□□□ -1.29
CKAP4-203ENST00000553039 FARP1Q9Y4F1 1045 aaPredicted RBP6.99□□□□□ -1.29
CKAP4-203ENST00000553039 KIAA2012Q0VF49 1180 aa6.98□□□□□ -1.29
CKAP4-203ENST00000553039 TBC1D10BQ4KMP7 808 aaPredicted RBP6.98□□□□□ -1.29
CKAP4-203ENST00000553039 DDRGK1Q96HY6 314 aa6.98□□□□□ -1.29
CKAP4-203ENST00000553039 NLRP3Q96P20 1036 aa6.98□□□□□ -1.29
CKAP4-203ENST00000553039 COL25A1Q9BXS0 654 aaPredicted RBP6.98□□□□□ -1.29
CKAP4-203ENST00000553039 EFCC1Q9HA90 598 aa6.98□□□□□ -1.29
CKAP4-203ENST00000553039 GOPCQ9HD26 462 aa6.98□□□□□ -1.29
CKAP4-203ENST00000553039 KIAA0100Q14667 2235 aaKnown RBP6.97□□□□□ -1.29
CKAP4-203ENST00000553039 HEG1Q9ULI3 1381 aa6.97□□□□□ -1.29
CKAP4-203ENST00000553039 SPDYE16A6NNV3 312 aaPredicted RBP6.97□□□□□ -1.29
CKAP4-203ENST00000553039 ADM5C9JUS6 153 aa6.97□□□□□ -1.29
CKAP4-203ENST00000553039 GPR37O15354 613 aa6.97□□□□□ -1.29
CKAP4-203ENST00000553039 NF2P35240 595 aa6.97□□□□□ -1.29
CKAP4-203ENST00000553039 TTLL12Q14166 644 aaPredicted RBP6.97□□□□□ -1.29
CKAP4-203ENST00000553039 AEBP1Q8IUX7 1158 aa6.97□□□□□ -1.29
CKAP4-203ENST00000553039 CDCA5Q96FF9 252 aa6.97□□□□□ -1.29
CKAP4-203ENST00000553039 HTATIP2Q9BUP3 242 aa6.97□□□□□ -1.29
CKAP4-203ENST00000553039 FAM117AQ9C073 453 aa6.97□□□□□ -1.29
CKAP4-203ENST00000553039 PRDM6Q9NQX0 595 aa6.97□□□□□ -1.29
CKAP4-203ENST00000553039 STXBP5LQ9Y2K9 1186 aa6.97□□□□□ -1.29
CKAP4-203ENST00000553039 UBE2Q2LH0YL09 131 aa6.96□□□□□ -1.3
CKAP4-203ENST00000553039 NKX2-3Q8TAU0 364 aa6.96□□□□□ -1.3
CKAP4-203ENST00000553039 USP16Q9Y5T5 823 aa6.96□□□□□ -1.3
CKAP4-203ENST00000553039 ZNF316A6NFI3 1004 aaPredicted RBP6.95□□□□□ -1.3
CKAP4-203ENST00000553039 MANSC4A6NHS7 340 aaPredicted RBP6.95□□□□□ -1.3
CKAP4-203ENST00000553039 ERVV-1B6SEH8 477 aa6.95□□□□□ -1.3
CKAP4-203ENST00000553039 PSMD14O00487 310 aa6.95□□□□□ -1.3
CKAP4-203ENST00000553039 SNRPA1P09661 255 aaKnown RBP6.95□□□□□ -1.3
CKAP4-203ENST00000553039 SCARF1Q14162 830 aa6.95□□□□□ -1.3
CKAP4-203ENST00000553039 PDIA6Q15084 440 aa6.95□□□□□ -1.3
CKAP4-203ENST00000553039 AMHR2Q16671 573 aa6.95□□□□□ -1.3
CKAP4-203ENST00000553039 WASHC4Q2M389 1173 aa6.95□□□□□ -1.3
CKAP4-203ENST00000553039 KIF4BQ2VIQ3 1234 aa6.95□□□□□ -1.3
CKAP4-203ENST00000553039 SLC9C1Q4G0N8 1177 aa6.95□□□□□ -1.3
CKAP4-203ENST00000553039 ARMC9Q7Z3E5 817 aa6.95□□□□□ -1.3
CKAP4-203ENST00000553039 TMC4Q7Z404 712 aa6.95□□□□□ -1.3
CKAP4-203ENST00000553039 PPP1R42Q7Z4L9 355 aa6.95□□□□□ -1.3
CKAP4-203ENST00000553039 NUTM1Q86Y26 1132 aa6.95□□□□□ -1.3
CKAP4-203ENST00000553039 SLC10A4Q96EP9 437 aa6.95□□□□□ -1.3
CKAP4-203ENST00000553039 ADAMTS7Q9UKP4 1686 aa6.95□□□□□ -1.3
CKAP4-203ENST00000553039 CEP290O15078 2479 aa6.95□□□□□ -1.3
CKAP4-203ENST00000553039 AKAP11Q9UKA4 1901 aa6.95□□□□□ -1.3
CKAP4-203ENST00000553039 SHTN1A0MZ66 631 aa6.94□□□□□ -1.3
CKAP4-203ENST00000553039 A6NJR5 290 aa6.94□□□□□ -1.3
CKAP4-203ENST00000553039 BTBD11A6QL63 1104 aa6.94□□□□□ -1.3
CKAP4-203ENST00000553039 G3V3G9 751 aa6.94□□□□□ -1.3
CKAP4-203ENST00000553039 APBB1O00213 710 aa6.94□□□□□ -1.3
CKAP4-203ENST00000553039 SP3Q02447 781 aa6.94□□□□□ -1.3
CKAP4-203ENST00000553039 MTHFSDQ2M296 383 aaKnown RBP6.94□□□□□ -1.3
CKAP4-203ENST00000553039 DEFB123Q8N688 67 aa6.94□□□□□ -1.3
CKAP4-203ENST00000553039 KIF12Q96FN5 646 aa6.94□□□□□ -1.3
CKAP4-203ENST00000553039 ZNF333Q96JL9 665 aa6.94□□□□□ -1.3
CKAP4-203ENST00000553039 ARID3AQ99856 593 aa6.94□□□□□ -1.3
CKAP4-203ENST00000553039 R3HDMLQ9H3Y0 253 aa6.94□□□□□ -1.3
CKAP4-203ENST00000553039 GGA3Q9NZ52 723 aa6.94□□□□□ -1.3
CKAP4-203ENST00000553039 A0A0C4DFX4 3053 aa6.94□□□□□ -1.3
CKAP4-203ENST00000553039 WTIPA6NIX2 430 aaPredicted RBP6.93□□□□□ -1.3
CKAP4-203ENST00000553039 GNAT3A8MTJ3 354 aa6.93□□□□□ -1.3
CKAP4-203ENST00000553039 WDHD1O75717 1129 aaPredicted RBP6.93□□□□□ -1.3
CKAP4-203ENST00000553039 CAPN2P17655 700 aa6.93□□□□□ -1.3
CKAP4-203ENST00000553039 IL13P35225 146 aa6.93□□□□□ -1.3
CKAP4-203ENST00000553039 HLFQ16534 295 aa6.93□□□□□ -1.3
CKAP4-203ENST00000553039 SLC10A5Q5PT55 438 aa6.93□□□□□ -1.3
CKAP4-203ENST00000553039 ANGEL2Q5VTE6 544 aaKnown RBP6.93□□□□□ -1.3
CKAP4-203ENST00000553039 DDX46Q7L014 1031 aaKnown RBP6.93□□□□□ -1.3
CKAP4-203ENST00000553039 MORC1Q86VD1 984 aa6.93□□□□□ -1.3
CKAP4-203ENST00000553039 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.93□□□□□ -1.3
CKAP4-203ENST00000553039 EYA3Q99504 573 aa6.93□□□□□ -1.3
CKAP4-203ENST00000553039 GPHNQ9NQX3 736 aaPredicted RBP6.93□□□□□ -1.3
CKAP4-203ENST00000553039 ANKRD31Q8N7Z5 1873 aa6.92□□□□□ -1.3
CKAP4-203ENST00000553039 YDJCA8MPS7 323 aa6.92□□□□□ -1.3
CKAP4-203ENST00000553039 VIL1P09327 827 aaKnown RBP6.92□□□□□ -1.3
CKAP4-203ENST00000553039 PDIA4P13667 645 aaKnown RBP6.92□□□□□ -1.3
CKAP4-203ENST00000553039 PPP1R15BQ5SWA1 713 aa6.92□□□□□ -1.3
CKAP4-203ENST00000553039 SPRYD7Q5W111 196 aa6.92□□□□□ -1.3
CKAP4-203ENST00000553039 AGBL3Q8NEM8 1001 aa6.92□□□□□ -1.3
CKAP4-203ENST00000553039 IL17REQ8NFR9 667 aa6.92□□□□□ -1.3
CKAP4-203ENST00000553039 CD99L2Q8TCZ2 262 aa6.92□□□□□ -1.3
CKAP4-203ENST00000553039 SYMPKQ92797 1274 aaKnown RBP6.92□□□□□ -1.3
CKAP4-203ENST00000553039 ZC3H12CQ9C0D7 883 aaKnown RBP6.92□□□□□ -1.3
CKAP4-203ENST00000553039 PRO3102Q9H379 93 aa6.92□□□□□ -1.3
CKAP4-203ENST00000553039 SNED1Q8TER0 1413 aa6.92□□□□□ -1.3
CKAP4-203ENST00000553039 TJP1Q07157 1748 aa6.91□□□□□ -1.3
CKAP4-203ENST00000553039 UNCXA6NJT0 531 aa6.91□□□□□ -1.3
CKAP4-203ENST00000553039 C6orf229H3BNL8 230 aa6.91□□□□□ -1.3
CKAP4-203ENST00000553039 MAP3K13O43283 966 aa6.91□□□□□ -1.3
CKAP4-203ENST00000553039 EGFRP00533 1210 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms