RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 FOXO3O43524 673 aa7.5□□□□□ -1.21
CHMP4A-210ENST00000552620 EIF5BO60841 1220 aaKnown RBP7.5□□□□□ -1.21
CHMP4A-210ENST00000552620 LGR5O75473 907 aa7.5□□□□□ -1.21
CHMP4A-210ENST00000552620 FRAT2O75474 233 aaPredicted RBP7.5□□□□□ -1.21
CHMP4A-210ENST00000552620 INHAP05111 366 aa7.5□□□□□ -1.21
CHMP4A-210ENST00000552620 SCNN1DP51172 638 aa7.5□□□□□ -1.21
CHMP4A-210ENST00000552620 RIPK4P57078 832 aa7.5□□□□□ -1.21
CHMP4A-210ENST00000552620 SMC5Q8IY18 1101 aa7.5□□□□□ -1.21
CHMP4A-210ENST00000552620 GAS2L2Q8NHY3 880 aa7.5□□□□□ -1.21
CHMP4A-210ENST00000552620 SSH1Q8WYL5 1049 aa7.5□□□□□ -1.21
CHMP4A-210ENST00000552620 EMID1Q96A84 441 aaPredicted RBP7.5□□□□□ -1.21
CHMP4A-210ENST00000552620 VTI1AQ96AJ9 217 aa7.5□□□□□ -1.21
CHMP4A-210ENST00000552620 MRGPRX2Q96LB1 330 aa7.5□□□□□ -1.21
CHMP4A-210ENST00000552620 GGNBP2Q9H3C7 697 aa7.5□□□□□ -1.21
CHMP4A-210ENST00000552620 STK26Q9P289 416 aa7.5□□□□□ -1.21
CHMP4A-210ENST00000552620 YTHDC2Q9H6S0 1430 aaKnown RBP7.5□□□□□ -1.21
CHMP4A-210ENST00000552620 SIGLEC1Q9BZZ2 1709 aa7.49□□□□□ -1.21
CHMP4A-210ENST00000552620 COL3A1P02461 1466 aaPredicted RBP7.49□□□□□ -1.21
CHMP4A-210ENST00000552620 CLTCQ00610 1675 aaKnown RBP7.49□□□□□ -1.21
CHMP4A-210ENST00000552620 LILRA1O75019 489 aa7.49□□□□□ -1.21
CHMP4A-210ENST00000552620 TRIM27P14373 513 aa7.49□□□□□ -1.21
CHMP4A-210ENST00000552620 SCNN1AP37088 669 aa7.49□□□□□ -1.21
CHMP4A-210ENST00000552620 FKBP5Q13451 457 aaPredicted RBP7.49□□□□□ -1.21
CHMP4A-210ENST00000552620 GLYCTKQ8IVS8 523 aa7.49□□□□□ -1.21
CHMP4A-210ENST00000552620 ARHGAP45Q92619 1136 aa7.49□□□□□ -1.21
CHMP4A-210ENST00000552620 COL26A1Q96A83 441 aa7.49□□□□□ -1.21
CHMP4A-210ENST00000552620 PRAM1Q96QH2 718 aa7.49□□□□□ -1.21
CHMP4A-210ENST00000552620 MKNK1Q9BUB5 465 aa7.49□□□□□ -1.21
CHMP4A-210ENST00000552620 CDK19Q9BWU1 502 aa7.49□□□□□ -1.21
CHMP4A-210ENST00000552620 BCL2L13Q9BXK5 485 aa7.49□□□□□ -1.21
CHMP4A-210ENST00000552620 ANTXR1Q9H6X2 564 aa7.49□□□□□ -1.21
CHMP4A-210ENST00000552620 ZBTB40Q9NUA8 1239 aa7.49□□□□□ -1.21
CHMP4A-210ENST00000552620 NOB1Q9ULX3 412 aaKnown RBP7.49□□□□□ -1.21
CHMP4A-210ENST00000552620 TNNQ9UQP3 1299 aa7.49□□□□□ -1.21
CHMP4A-210ENST00000552620 PTPRMP28827 1452 aa7.49□□□□□ -1.21
CHMP4A-210ENST00000552620 TMEM131LA2VDJ0 1609 aa7.49□□□□□ -1.21
CHMP4A-210ENST00000552620 DLC1Q96QB1 1528 aa7.48□□□□□ -1.21
CHMP4A-210ENST00000552620 H3BRB1 525 aa7.48□□□□□ -1.21
CHMP4A-210ENST00000552620 GFRA3O60609 400 aa7.48□□□□□ -1.21
CHMP4A-210ENST00000552620 RBM25P49756 843 aaKnown RBP7.48□□□□□ -1.21
CHMP4A-210ENST00000552620 SF3B2Q13435 895 aaKnown RBP7.48□□□□□ -1.21
CHMP4A-210ENST00000552620 LAPTM4AQ15012 233 aa7.48□□□□□ -1.21
CHMP4A-210ENST00000552620 L1TD1Q5T7N2 865 aaKnown RBP7.48□□□□□ -1.21
CHMP4A-210ENST00000552620 SPRYD7Q5W111 196 aa7.48□□□□□ -1.21
CHMP4A-210ENST00000552620 TNS4Q8IZW8 715 aa7.48□□□□□ -1.21
CHMP4A-210ENST00000552620 SCG3Q8WXD2 468 aaKnown RBP7.48□□□□□ -1.21
CHMP4A-210ENST00000552620 TSR2Q969E8 191 aaKnown RBP7.48□□□□□ -1.21
CHMP4A-210ENST00000552620 C22orf23Q9BZE7 217 aa7.48□□□□□ -1.21
CHMP4A-210ENST00000552620 TUT1Q9H6E5 874 aaKnown RBP7.48□□□□□ -1.21
CHMP4A-210ENST00000552620 ETNK1Q9HBU6 452 aa7.48□□□□□ -1.21
CHMP4A-210ENST00000552620 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.48□□□□□ -1.215e-8■■■■■ 141.5
CHMP4A-210ENST00000552620 SERTAD1Q9UHV2 236 aa7.48□□□□□ -1.21
CHMP4A-210ENST00000552620 ANKRD26Q9UPS8 1709 aa7.48□□□□□ -1.21
CHMP4A-210ENST00000552620 WASF2Q9Y6W5 498 aa7.48□□□□□ -1.21
CHMP4A-210ENST00000552620 NLRP1Q9C000 1473 aa7.48□□□□□ -1.21
CHMP4A-210ENST00000552620 PPIP5K1Q6PFW1 1433 aa7.47□□□□□ -1.21
CHMP4A-210ENST00000552620 ICMTO60725 284 aa7.47□□□□□ -1.21
CHMP4A-210ENST00000552620 MARSP56192 900 aaKnown RBP7.47□□□□□ -1.21
CHMP4A-210ENST00000552620 NUCB1Q02818 461 aa7.47□□□□□ -1.21
CHMP4A-210ENST00000552620 ZNF211Q13398 564 aaPredicted RBP7.47□□□□□ -1.21
CHMP4A-210ENST00000552620 SAFB2Q14151 953 aaKnown RBP eCLIP7.47□□□□□ -1.21
CHMP4A-210ENST00000552620 ITPRIPQ8IWB1 547 aa7.47□□□□□ -1.21
CHMP4A-210ENST00000552620 GTF3C2Q8WUA4 911 aaPredicted RBP7.47□□□□□ -1.21
CHMP4A-210ENST00000552620 SLC4A9Q96Q91 983 aa7.47□□□□□ -1.21
CHMP4A-210ENST00000552620 CABP1Q9NZU7 370 aa7.47□□□□□ -1.21
CHMP4A-210ENST00000552620 CHMP5Q9NZZ3 219 aa7.47□□□□□ -1.21
CHMP4A-210ENST00000552620 CD163L1Q9NR16 1453 aa7.47□□□□□ -1.21
CHMP4A-210ENST00000552620 ARHGEF40Q8TER5 1519 aa7.47□□□□□ -1.21
CHMP4A-210ENST00000552620 CDC42BPGQ6DT37 1551 aa7.46□□□□□ -1.21
CHMP4A-210ENST00000552620 ALKQ9UM73 1620 aa7.46□□□□□ -1.21
CHMP4A-210ENST00000552620 C21orf2O43822 256 aa7.46□□□□□ -1.22
CHMP4A-210ENST00000552620 ALDH1A1P00352 501 aa7.46□□□□□ -1.22
CHMP4A-210ENST00000552620 NR3C2P08235 984 aa7.46□□□□□ -1.22
CHMP4A-210ENST00000552620 GNAI1P63096 354 aa7.46□□□□□ -1.22
CHMP4A-210ENST00000552620 LMOD3Q0VAK6 560 aa7.46□□□□□ -1.22
CHMP4A-210ENST00000552620 NNTQ13423 1086 aa7.46□□□□□ -1.22
CHMP4A-210ENST00000552620 NFE2L2Q16236 605 aa7.46□□□□□ -1.22
CHMP4A-210ENST00000552620 ZNF697Q5TEC3 545 aa7.46□□□□□ -1.22
CHMP4A-210ENST00000552620 ZNF598Q86UK7 904 aaKnown RBP7.46□□□□□ -1.22
CHMP4A-210ENST00000552620 TMEM57Q8N5G2 664 aa7.46□□□□□ -1.22
CHMP4A-210ENST00000552620 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.46□□□□□ -1.22
CHMP4A-210ENST00000552620 SNX21Q969T3 373 aa7.46□□□□□ -1.22
CHMP4A-210ENST00000552620 GCC1Q96CN9 775 aa7.46□□□□□ -1.22
CHMP4A-210ENST00000552620 IFT57Q9NWB7 429 aa7.46□□□□□ -1.22
CHMP4A-210ENST00000552620 POLKQ9UBT6 870 aa7.46□□□□□ -1.22
CHMP4A-210ENST00000552620 SEPT3Q9UH03 358 aa7.46□□□□□ -1.22
CHMP4A-210ENST00000552620 CHMP3Q9Y3E7 222 aa7.46□□□□□ -1.22
CHMP4A-210ENST00000552620 ATP7BP35670 1465 aa7.46□□□□□ -1.22
CHMP4A-210ENST00000552620 PREX1Q8TCU6 1659 aa7.46□□□□□ -1.22
CHMP4A-210ENST00000552620 RICTORQ6R327 1708 aa7.46□□□□□ -1.22
CHMP4A-210ENST00000552620 KIF24Q5T7B8 1368 aa7.46□□□□□ -1.22
CHMP4A-210ENST00000552620 A6NJY4 79 aa7.45□□□□□ -1.22
CHMP4A-210ENST00000552620 PPP1R12BO60237 982 aaPredicted RBP7.45□□□□□ -1.22
CHMP4A-210ENST00000552620 VAMP4O75379 141 aa7.45□□□□□ -1.22
CHMP4A-210ENST00000552620 STAU1O95793 577 aaKnown RBP7.45□□□□□ -1.22
CHMP4A-210ENST00000552620 EPHA4P54764 986 aa7.45□□□□□ -1.22
CHMP4A-210ENST00000552620 FKBP4Q02790 459 aaKnown RBP eCLIP7.45□□□□□ -1.22
CHMP4A-210ENST00000552620 TSPAN10Q9H1Z9 355 aaPredicted RBP7.45□□□□□ -1.22
CHMP4A-210ENST00000552620 ARHGEF10LQ9HCE6 1279 aa7.45□□□□□ -1.22
CHMP4A-210ENST00000552620 ANO2Q9NQ90 1003 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms