RNA–Protein interactions for RNA: ENST00000552442.1

UBE2N-206, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 5 BASIC

Gene UBE2N, Length 607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-206ENST00000552442 C9orf131Q5VYM1 1079 aa11.71□□□□□ -0.53
UBE2N-206ENST00000552442 POTEEQ6S8J3 1075 aa11.71□□□□□ -0.53
UBE2N-206ENST00000552442 CDAN1Q8IWY9 1227 aa11.71□□□□□ -0.53
UBE2N-206ENST00000552442 ZNF34Q8IZ26 560 aa11.71□□□□□ -0.53
UBE2N-206ENST00000552442 GPBP1L1Q9HC44 474 aaPredicted RBP11.71□□□□□ -0.53
UBE2N-206ENST00000552442 DBF4Q9UBU7 674 aaPredicted RBP11.71□□□□□ -0.53
UBE2N-206ENST00000552442 DDX60Q8IY21 1712 aaKnown RBP11.71□□□□□ -0.54
UBE2N-206ENST00000552442 NPR1P16066 1061 aa11.7□□□□□ -0.54
UBE2N-206ENST00000552442 PSEN2P49810 448 aa11.7□□□□□ -0.54
UBE2N-206ENST00000552442 ERFEQ4G0M1 354 aa11.7□□□□□ -0.54
UBE2N-206ENST00000552442 PARP10Q53GL7 1025 aa11.7□□□□□ -0.54
UBE2N-206ENST00000552442 HSP90AB3PQ58FF7 597 aa11.7□□□□□ -0.54
UBE2N-206ENST00000552442 SUSD4Q5VX71 490 aa11.7□□□□□ -0.54
UBE2N-206ENST00000552442 NUTM1Q86Y26 1132 aa11.7□□□□□ -0.54
UBE2N-206ENST00000552442 WWC1Q8IX03 1113 aa11.7□□□□□ -0.54
UBE2N-206ENST00000552442 RNF181Q9P0P0 153 aa11.7□□□□□ -0.54
UBE2N-206ENST00000552442 KLRG2A4D1S0 409 aaPredicted RBP11.69□□□□□ -0.54
UBE2N-206ENST00000552442 ELL2O00472 640 aaPredicted RBP11.69□□□□□ -0.54
UBE2N-206ENST00000552442 C21orf2O43822 256 aa11.69□□□□□ -0.54
UBE2N-206ENST00000552442 NTSR2O95665 410 aa11.69□□□□□ -0.54
UBE2N-206ENST00000552442 PRPF40BQ6NWY9 871 aaKnown RBP11.69□□□□□ -0.54
UBE2N-206ENST00000552442 PPP1R42Q7Z4L9 355 aa11.69□□□□□ -0.54
UBE2N-206ENST00000552442 FAM9BQ8IZU0 186 aa11.69□□□□□ -0.54
UBE2N-206ENST00000552442 C8orf58Q8NAV2 365 aa11.69□□□□□ -0.54
UBE2N-206ENST00000552442 HYPKQ9NX55 129 aa11.69□□□□□ -0.54
UBE2N-206ENST00000552442 TAF1P21675 1872 aa11.69□□□□□ -0.54
UBE2N-206ENST00000552442 IL16Q14005 1332 aa11.68□□□□□ -0.54
UBE2N-206ENST00000552442 NFKBIEO00221 500 aa11.68□□□□□ -0.54
UBE2N-206ENST00000552442 TSR2Q969E8 191 aaKnown RBP11.68□□□□□ -0.54
UBE2N-206ENST00000552442 SALL2Q9Y467 1007 aaPredicted RBP11.68□□□□□ -0.54
UBE2N-206ENST00000552442 RNF123Q5XPI4 1314 aa11.67□□□□□ -0.54
UBE2N-206ENST00000552442 MYH3P11055 1940 aa11.67□□□□□ -0.54
UBE2N-206ENST00000552442 LMNB1P20700 586 aa11.67□□□□□ -0.54
UBE2N-206ENST00000552442 TCIRG1Q13488 830 aa11.67□□□□□ -0.54
UBE2N-206ENST00000552442 SOGA3Q5TF21 947 aa11.67□□□□□ -0.54
UBE2N-206ENST00000552442 NLRP10Q86W26 655 aa11.67□□□□□ -0.54
UBE2N-206ENST00000552442 PLBD2Q8NHP8 589 aa11.67□□□□□ -0.54
UBE2N-206ENST00000552442 RPGRQ92834 1020 aaKnown RBP11.67□□□□□ -0.54
UBE2N-206ENST00000552442 UTP14AQ9BVJ6 771 aaKnown RBP11.67□□□□□ -0.54
UBE2N-206ENST00000552442 CHMP4AQ9BY43 222 aa11.67□□□□□ -0.54
UBE2N-206ENST00000552442 ZC3H4Q9UPT8 1303 aaKnown RBP11.66□□□□□ -0.54
UBE2N-206ENST00000552442 COL9A1P20849 921 aa11.66□□□□□ -0.54
UBE2N-206ENST00000552442 ALDH1B1P30837 517 aa11.66□□□□□ -0.54
UBE2N-206ENST00000552442 C1QTNF8P60827 252 aa11.66□□□□□ -0.54
UBE2N-206ENST00000552442 LSM11P83369 360 aaKnown RBP eCLIP11.66□□□□□ -0.54
UBE2N-206ENST00000552442 CRY2Q49AN0 593 aa11.66□□□□□ -0.54
UBE2N-206ENST00000552442 CCDC30Q5VVM6 783 aa11.66□□□□□ -0.54
UBE2N-206ENST00000552442 ANKRD13DQ6ZTN6 518 aa11.66□□□□□ -0.54
UBE2N-206ENST00000552442 TAOK3Q9H2K8 898 aa11.66□□□□□ -0.54
UBE2N-206ENST00000552442 LTBP3Q9NS15 1303 aa11.65□□□□□ -0.54
UBE2N-206ENST00000552442 PRELPP51888 382 aa11.65□□□□□ -0.54
UBE2N-206ENST00000552442 PTGDRQ13258 359 aa11.65□□□□□ -0.54
UBE2N-206ENST00000552442 CCDC93Q567U6 631 aa11.65□□□□□ -0.54
UBE2N-206ENST00000552442 DMRTA1Q5VZB9 504 aa11.65□□□□□ -0.54
UBE2N-206ENST00000552442 WDR63Q8IWG1 891 aa11.65□□□□□ -0.54
UBE2N-206ENST00000552442 TSPYL6Q8N831 410 aa11.65□□□□□ -0.54
UBE2N-206ENST00000552442 PCDH10Q9P2E7 1040 aa11.65□□□□□ -0.54
UBE2N-206ENST00000552442 KDM2BQ8NHM5 1336 aa11.64□□□□□ -0.55
UBE2N-206ENST00000552442 SH3TC1Q8TE82 1336 aa11.64□□□□□ -0.55
UBE2N-206ENST00000552442 FANCIQ9NVI1 1328 aa11.64□□□□□ -0.55
UBE2N-206ENST00000552442 TWISTNBQ3B726 338 aaPredicted RBP11.64□□□□□ -0.55
UBE2N-206ENST00000552442 SLC10A5Q5PT55 438 aa11.64□□□□□ -0.55
UBE2N-206ENST00000552442 RIC3Q7Z5B4 369 aa11.64□□□□□ -0.55
UBE2N-206ENST00000552442 C7orf43Q8WVR3 580 aa11.64□□□□□ -0.55
UBE2N-206ENST00000552442 NLRP3Q96P20 1036 aa11.64□□□□□ -0.55
UBE2N-206ENST00000552442 ISCA1Q9BUE6 129 aa11.64□□□□□ -0.55
UBE2N-206ENST00000552442 KRTAP3-3Q9BYR6 98 aa11.64□□□□□ -0.55
UBE2N-206ENST00000552442 KRTAP3-2Q9BYR7 98 aa11.64□□□□□ -0.55
UBE2N-206ENST00000552442 PHAXQ9H814 394 aaKnown RBP11.64□□□□□ -0.55
UBE2N-206ENST00000552442 TRMT112Q9UI30 125 aaKnown RBP11.64□□□□□ -0.55
UBE2N-206ENST00000552442 ATP5J2-PTCD1G3V325 749 aa11.63□□□□□ -0.55
UBE2N-206ENST00000552442 DDX58O95786 925 aaKnown RBP11.63□□□□□ -0.55
UBE2N-206ENST00000552442 HOXA10P31260 410 aaPredicted RBP11.63□□□□□ -0.55
UBE2N-206ENST00000552442 ZNF428Q96B54 188 aa11.63□□□□□ -0.55
UBE2N-206ENST00000552442 RBM17Q96I25 401 aaKnown RBP11.63□□□□□ -0.55
UBE2N-206ENST00000552442 ZBED2Q9BTP6 218 aa11.63□□□□□ -0.55
UBE2N-206ENST00000552442 STK31Q9BXU1 1019 aa11.63□□□□□ -0.55
UBE2N-206ENST00000552442 NMRK2Q9NPI5 230 aa11.63□□□□□ -0.55
UBE2N-206ENST00000552442 RBM27Q9P2N5 1060 aaKnown RBP11.63□□□□□ -0.55
UBE2N-206ENST00000552442 WDR90Q96KV7 1748 aa11.63□□□□□ -0.55
UBE2N-206ENST00000552442 TCERG1O14776 1098 aaKnown RBP11.62□□□□□ -0.55
UBE2N-206ENST00000552442 HCLS1P14317 486 aaPredicted RBP11.62□□□□□ -0.55
UBE2N-206ENST00000552442 HIC1Q14526 733 aa11.62□□□□□ -0.55
UBE2N-206ENST00000552442 OLFM4Q6UX06 510 aa11.62□□□□□ -0.55
UBE2N-206ENST00000552442 RTKN2Q8IZC4 609 aa11.62□□□□□ -0.55
UBE2N-206ENST00000552442 SYNE4Q8N205 404 aa11.62□□□□□ -0.55
UBE2N-206ENST00000552442 CRAMP1Q96RY5 1269 aa11.62□□□□□ -0.55
UBE2N-206ENST00000552442 SLC4A5Q9BY07 1137 aa11.62□□□□□ -0.55
UBE2N-206ENST00000552442 NPDC1Q9NQX5 325 aaPredicted RBP11.62□□□□□ -0.55
UBE2N-206ENST00000552442 LRRC37AA6NMS7 1700 aa11.62□□□□□ -0.55
UBE2N-206ENST00000552442 SPEF2Q9C093 1822 aa11.62□□□□□ -0.55
UBE2N-206ENST00000552442 SNED1Q8TER0 1413 aa11.61□□□□□ -0.55
UBE2N-206ENST00000552442 SCN4AP35499 1836 aa11.61□□□□□ -0.55
UBE2N-206ENST00000552442 TK2O00142 265 aa11.61□□□□□ -0.55
UBE2N-206ENST00000552442 PPEF1O14829 653 aaPredicted RBP11.61□□□□□ -0.55
UBE2N-206ENST00000552442 GPR37O15354 613 aa11.61□□□□□ -0.55
UBE2N-206ENST00000552442 FKBP4Q02790 459 aaKnown RBP eCLIP11.61□□□□□ -0.55
UBE2N-206ENST00000552442 TRIM28Q13263 835 aaKnown RBP11.61□□□□□ -0.55
UBE2N-206ENST00000552442 CC2D2BQ6DHV5 1058 aa11.61□□□□□ -0.55
UBE2N-206ENST00000552442 MYD88Q99836 296 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms