RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 PODXL2Q9NZ53 605 aa23.21■■□□□ 1.31
PRPF40B-216ENST00000552301 ZNF541Q9H0D2 1346 aa23.2■■□□□ 1.3
PRPF40B-216ENST00000552301 FZD9O00144 591 aa23.2■■□□□ 1.3
PRPF40B-216ENST00000552301 C1QTNF8P60827 252 aa23.2■■□□□ 1.3
PRPF40B-216ENST00000552301 WASHC4Q2M389 1173 aa23.2■■□□□ 1.3
PRPF40B-216ENST00000552301 FTSJ3Q8IY81 847 aaKnown RBP23.2■■□□□ 1.3
PRPF40B-216ENST00000552301 C16orf71Q8IYS4 520 aaPredicted RBP23.2■■□□□ 1.3
PRPF40B-216ENST00000552301 TBC1D16Q8TBP0 767 aa23.2■■□□□ 1.3
PRPF40B-216ENST00000552301 CLUAP1Q96AJ1 413 aa23.2■■□□□ 1.3
PRPF40B-216ENST00000552301 YTHDC1Q96MU7 727 aaKnown RBP23.2■■□□□ 1.3
PRPF40B-216ENST00000552301 INTS3Q68E01 1043 aaKnown RBP23.19■■□□□ 1.3
PRPF40B-216ENST00000552301 RRAGCQ9HB90 399 aa23.19■■□□□ 1.3
PRPF40B-216ENST00000552301 POLLQ9UGP5 575 aa23.19■■□□□ 1.3
PRPF40B-216ENST00000552301 MINPP1Q9UNW1 487 aa23.19■■□□□ 1.3
PRPF40B-216ENST00000552301 LTBP1Q14766 1721 aa23.19■■□□□ 1.3
PRPF40B-216ENST00000552301 RIMBP2O15034 1052 aa23.18■■□□□ 1.3
PRPF40B-216ENST00000552301 DDNO94850 711 aaPredicted RBP23.18■■□□□ 1.3
PRPF40B-216ENST00000552301 ATP2B4P23634 1241 aa23.18■■□□□ 1.3
PRPF40B-216ENST00000552301 KAZALD1Q96I82 304 aa23.18■■□□□ 1.3
PRPF40B-216ENST00000552301 ANKRD2Q9GZV1 360 aa23.18■■□□□ 1.3
PRPF40B-216ENST00000552301 COL4A5P29400 1685 aa23.18■■□□□ 1.3
PRPF40B-216ENST00000552301 G3V3G9 751 aa23.17■■□□□ 1.3
PRPF40B-216ENST00000552301 KIF3CO14782 793 aa23.17■■□□□ 1.3
PRPF40B-216ENST00000552301 RABL6Q3YEC7 729 aaPredicted RBP23.17■■□□□ 1.3
PRPF40B-216ENST00000552301 DCAF8Q5TAQ9 597 aa23.17■■□□□ 1.3
PRPF40B-216ENST00000552301 ZC3H12CQ9C0D7 883 aaKnown RBP23.17■■□□□ 1.3
PRPF40B-216ENST00000552301 ZNRF3Q9ULT6 936 aa23.17■■□□□ 1.3
PRPF40B-216ENST00000552301 VEGFAP15692 232 aaPredicted RBP23.16■■□□□ 1.3
PRPF40B-216ENST00000552301 ANKRD44Q8N8A2 993 aa23.16■■□□□ 1.3
PRPF40B-216ENST00000552301 GPR101Q96P66 508 aaPredicted RBP23.16■■□□□ 1.3
PRPF40B-216ENST00000552301 CNNM1Q9NRU3 951 aa23.16■■□□□ 1.3
PRPF40B-216ENST00000552301 TNNQ9UQP3 1299 aa23.16■■□□□ 1.3
PRPF40B-216ENST00000552301 GJA3Q9Y6H8 435 aa23.16■■□□□ 1.3
PRPF40B-216ENST00000552301 WDR90Q96KV7 1748 aa23.16■■□□□ 1.3
PRPF40B-216ENST00000552301 GNAI3P08754 354 aa23.15■■□□□ 1.3
PRPF40B-216ENST00000552301 KCNJ4P48050 445 aa23.15■■□□□ 1.3
PRPF40B-216ENST00000552301 LDHAL6AQ6ZMR3 332 aa23.15■■□□□ 1.3
PRPF40B-216ENST00000552301 GPC2Q8N158 579 aa23.15■■□□□ 1.3
PRPF40B-216ENST00000552301 ZNF594Q96JF6 807 aaPredicted RBP23.15■■□□□ 1.3
PRPF40B-216ENST00000552301 MEIS3Q99687 375 aa23.15■■□□□ 1.3
PRPF40B-216ENST00000552301 RCAN3Q9UKA8 241 aa23.15■■□□□ 1.3
PRPF40B-216ENST00000552301 IQCA1LA6NCM1 817 aa23.14■■□□□ 1.29
PRPF40B-216ENST00000552301 CHRNDQ07001 517 aa23.14■■□□□ 1.29
PRPF40B-216ENST00000552301 DZIP1LQ8IYY4 767 aaKnown RBP23.14■■□□□ 1.29
PRPF40B-216ENST00000552301 TMEM57Q8N5G2 664 aa23.13■■□□□ 1.29
PRPF40B-216ENST00000552301 DBNDD1Q9H9R9 158 aa23.13■■□□□ 1.29
PRPF40B-216ENST00000552301 LEMD3Q9Y2U8 911 aa23.13■■□□□ 1.29
PRPF40B-216ENST00000552301 LRRFIP2Q9Y608 721 aaKnown RBP23.13■■□□□ 1.29
PRPF40B-216ENST00000552301 CIAPIN1Q6FI81 312 aa23.12■■□□□ 1.29
PRPF40B-216ENST00000552301 L3MBTL3Q96JM7 780 aaPredicted RBP23.12■■□□□ 1.29
PRPF40B-216ENST00000552301 ECE2O60344 883 aa23.11■■□□□ 1.29
PRPF40B-216ENST00000552301 MS4A1P11836 297 aa23.11■■□□□ 1.29
PRPF40B-216ENST00000552301 LMOD1P29536 600 aaPredicted RBP23.11■■□□□ 1.29
PRPF40B-216ENST00000552301 TNIP1Q15025 636 aa23.11■■□□□ 1.29
PRPF40B-216ENST00000552301 DOK7Q18PE1 504 aa23.11■■□□□ 1.29
PRPF40B-216ENST00000552301 ITPRIPQ8IWB1 547 aa23.11■■□□□ 1.29
PRPF40B-216ENST00000552301 MED23Q9ULK4 1368 aa23.11■■□□□ 1.29
PRPF40B-216ENST00000552301 ZNF804BA4D1E1 1349 aa23.1■■□□□ 1.29
PRPF40B-216ENST00000552301 RAD17O75943 681 aa23.1■■□□□ 1.29
PRPF40B-216ENST00000552301 TOMM70O94826 608 aa23.1■■□□□ 1.29
PRPF40B-216ENST00000552301 CXCL9Q07325 125 aa23.1■■□□□ 1.29
PRPF40B-216ENST00000552301 HELBQ8NG08 1087 aaPredicted RBP23.09■■□□□ 1.29
PRPF40B-216ENST00000552301 HACL1Q9UJ83 578 aa23.09■■□□□ 1.29
PRPF40B-216ENST00000552301 SCN4AP35499 1836 aa23.09■■□□□ 1.29
PRPF40B-216ENST00000552301 YDJCA8MPS7 323 aa23.08■■□□□ 1.29
PRPF40B-216ENST00000552301 PLIN1O60240 522 aa23.08■■□□□ 1.29
PRPF40B-216ENST00000552301 TAF5LO75529 589 aa23.07■■□□□ 1.28
PRPF40B-216ENST00000552301 GNAI2P04899 355 aa23.07■■□□□ 1.28
PRPF40B-216ENST00000552301 RBM46Q8TBY0 533 aaKnown RBP23.07■■□□□ 1.28
PRPF40B-216ENST00000552301 MROH5Q6ZUA9 1318 aa23.07■■□□□ 1.28
PRPF40B-216ENST00000552301 POTECB2RU33 542 aa23.06■■□□□ 1.28
PRPF40B-216ENST00000552301 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.06■■□□□ 1.28
PRPF40B-216ENST00000552301 PUS3Q9BZE2 481 aaKnown RBP23.06■■□□□ 1.28
PRPF40B-216ENST00000552301 A0A1B0GUL6 1792 aa23.06■■□□□ 1.28
PRPF40B-216ENST00000552301 RLBP1P12271 317 aa23.05■■□□□ 1.28
PRPF40B-216ENST00000552301 METTL24Q5JXM2 366 aa23.05■■□□□ 1.28
PRPF40B-216ENST00000552301 KLHDC4Q8TBB5 520 aa23.05■■□□□ 1.28
PRPF40B-216ENST00000552301 TAF1DQ9H5J8 278 aaPredicted RBP23.05■■□□□ 1.28
PRPF40B-216ENST00000552301 WTIPA6NIX2 430 aaPredicted RBP23.04■■□□□ 1.28
PRPF40B-216ENST00000552301 EPHX2P34913 555 aa23.04■■□□□ 1.28
PRPF40B-216ENST00000552301 PODNQ7Z5L7 613 aa23.04■■□□□ 1.28
PRPF40B-216ENST00000552301 PANK1Q8TE04 598 aa23.04■■□□□ 1.28
PRPF40B-216ENST00000552301 COA1Q9GZY4 146 aa23.04■■□□□ 1.28
PRPF40B-216ENST00000552301 PSMD14O00487 310 aa23.03■■□□□ 1.28
PRPF40B-216ENST00000552301 GMPSP49915 693 aaPredicted RBP23.03■■□□□ 1.28
PRPF40B-216ENST00000552301 SCNN1DP51172 638 aa23.03■■□□□ 1.28
PRPF40B-216ENST00000552301 LRRC24Q50LG9 513 aa23.03■■□□□ 1.28
PRPF40B-216ENST00000552301 EAPPQ56P03 285 aaPredicted RBP23.03■■□□□ 1.28
PRPF40B-216ENST00000552301 SMC1BQ8NDV3 1235 aa23.03■■□□□ 1.28
PRPF40B-216ENST00000552301 RIPOR2Q9Y4F9 1068 aa23.03■■□□□ 1.28
PRPF40B-216ENST00000552301 EYA2O00167 538 aa23.02■■□□□ 1.28
PRPF40B-216ENST00000552301 SRGAP3O43295 1099 aa23.02■■□□□ 1.28
PRPF40B-216ENST00000552301 KLRK1P26718 216 aa23.02■■□□□ 1.28
PRPF40B-216ENST00000552301 RFX5P48382 616 aaPredicted RBP23.02■■□□□ 1.28
PRPF40B-216ENST00000552301 SNAP23O00161 211 aa23.01■■□□□ 1.27
PRPF40B-216ENST00000552301 PTPN12Q05209 780 aaKnown RBP23.01■■□□□ 1.27
PRPF40B-216ENST00000552301 UBE4AQ14139 1066 aa23.01■■□□□ 1.27
PRPF40B-216ENST00000552301 ZNF804AQ7Z570 1209 aa23.01■■□□□ 1.27
PRPF40B-216ENST00000552301 PNMA8AQ86V59 439 aaPredicted RBP23.01■■□□□ 1.27
PRPF40B-216ENST00000552301 TXNRD3Q86VQ6 643 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms