RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 LAMB4A4D0S4 1761 aa13.78□□□□□ -0.2
SLC48A1-209ENST00000552003 AMER1Q5JTC6 1135 aaPredicted RBP13.78□□□□□ -0.2
SLC48A1-209ENST00000552003 MCM10Q7L590 875 aa13.78□□□□□ -0.2
SLC48A1-209ENST00000552003 TMX4Q9H1E5 349 aaPredicted RBP13.78□□□□□ -0.2
SLC48A1-209ENST00000552003 POLLQ9UGP5 575 aa13.78□□□□□ -0.2
SLC48A1-209ENST00000552003 ECE2O60344 883 aa13.77□□□□□ -0.21
SLC48A1-209ENST00000552003 VIL1P09327 827 aaKnown RBP13.77□□□□□ -0.21
SLC48A1-209ENST00000552003 ZNF280AP59817 542 aaPredicted RBP13.77□□□□□ -0.21
SLC48A1-209ENST00000552003 PTPN12Q05209 780 aaKnown RBP13.77□□□□□ -0.21
SLC48A1-209ENST00000552003 CD99L2Q8TCZ2 262 aa13.77□□□□□ -0.21
SLC48A1-209ENST00000552003 ZNF333Q96JL9 665 aa13.77□□□□□ -0.21
SLC48A1-209ENST00000552003 PCGF6Q9BYE7 350 aa13.77□□□□□ -0.21
SLC48A1-209ENST00000552003 ZNF609O15014 1411 aa13.76□□□□□ -0.21
SLC48A1-209ENST00000552003 PITPNM2Q9BZ72 1349 aa13.76□□□□□ -0.21
SLC48A1-209ENST00000552003 HCLS1P14317 486 aaPredicted RBP13.76□□□□□ -0.21
SLC48A1-209ENST00000552003 DCTN1Q14203 1278 aa13.76□□□□□ -0.21
SLC48A1-209ENST00000552003 WASHC4Q2M389 1173 aa13.76□□□□□ -0.21
SLC48A1-209ENST00000552003 MIS18AQ9NYP9 233 aa13.76□□□□□ -0.21
SLC48A1-209ENST00000552003 RRP7AQ9Y3A4 280 aaKnown RBP13.76□□□□□ -0.21
SLC48A1-209ENST00000552003 IGF2BP3O00425 579 aaKnown RBP eCLIP13.75□□□□□ -0.21
SLC48A1-209ENST00000552003 GRAPQ13588 217 aa13.75□□□□□ -0.21
SLC48A1-209ENST00000552003 GIGYF2Q6Y7W6 1299 aaKnown RBP13.75□□□□□ -0.21
SLC48A1-209ENST00000552003 GRAPLQ8TC17 118 aaPredicted RBP13.75□□□□□ -0.21
SLC48A1-209ENST00000552003 COL25A1Q9BXS0 654 aaPredicted RBP13.75□□□□□ -0.21
SLC48A1-209ENST00000552003 WTIPA6NIX2 430 aaPredicted RBP13.74□□□□□ -0.21
SLC48A1-209ENST00000552003 MYL6BP14649 208 aa13.74□□□□□ -0.21
SLC48A1-209ENST00000552003 GPSM2P81274 684 aa13.74□□□□□ -0.21
SLC48A1-209ENST00000552003 SREBF2Q12772 1141 aa13.74□□□□□ -0.21
SLC48A1-209ENST00000552003 SPRYD7Q5W111 196 aa13.74□□□□□ -0.21
SLC48A1-209ENST00000552003 LRCH3Q96II8 777 aa13.74□□□□□ -0.21
SLC48A1-209ENST00000552003 GMLQ99445 158 aa13.74□□□□□ -0.21
SLC48A1-209ENST00000552003 FZD1Q9UP38 647 aa13.74□□□□□ -0.21
SLC48A1-209ENST00000552003 DDX60Q8IY21 1712 aaKnown RBP13.73□□□□□ -0.21
SLC48A1-209ENST00000552003 KIF6Q6ZMV9 814 aa13.73□□□□□ -0.21
SLC48A1-209ENST00000552003 LRP10Q7Z4F1 713 aa13.73□□□□□ -0.21
SLC48A1-209ENST00000552003 PPP1R42Q7Z4L9 355 aa13.73□□□□□ -0.21
SLC48A1-209ENST00000552003 IFNL1Q8IU54 200 aa13.73□□□□□ -0.21
SLC48A1-209ENST00000552003 UTP14AQ9BVJ6 771 aaKnown RBP13.73□□□□□ -0.21
SLC48A1-209ENST00000552003 NSFL1CQ9UNZ2 370 aaKnown RBP13.73□□□□□ -0.21
SLC48A1-209ENST00000552003 LAMB1P07942 1786 aa13.73□□□□□ -0.21
SLC48A1-209ENST00000552003 PSME4Q14997 1843 aa13.72□□□□□ -0.21
SLC48A1-209ENST00000552003 U2SURPO15042 1029 aaKnown RBP13.72□□□□□ -0.21
SLC48A1-209ENST00000552003 MYCP01106 439 aaPredicted RBP13.72□□□□□ -0.21
SLC48A1-209ENST00000552003 NBPF9Q3BBW0 867 aa13.72□□□□□ -0.21
SLC48A1-209ENST00000552003 LDLRAD1Q5T700 205 aa13.72□□□□□ -0.21
SLC48A1-209ENST00000552003 CELF1Q92879 486 aaKnown RBP13.72□□□□□ -0.21
SLC48A1-209ENST00000552003 PRKG1Q13976 671 aa13.71□□□□□ -0.21
SLC48A1-209ENST00000552003 TTLL12Q14166 644 aaPredicted RBP13.71□□□□□ -0.21
SLC48A1-209ENST00000552003 PARP10Q53GL7 1025 aa13.71□□□□□ -0.21
SLC48A1-209ENST00000552003 DDX46Q7L014 1031 aaKnown RBP13.71□□□□□ -0.21
SLC48A1-209ENST00000552003 ZNF428Q96B54 188 aa13.71□□□□□ -0.21
SLC48A1-209ENST00000552003 TMEM106CQ9BVX2 250 aa13.71□□□□□ -0.21
SLC48A1-209ENST00000552003 EFCC1Q9HA90 598 aa13.71□□□□□ -0.21
SLC48A1-209ENST00000552003 MYOZ2Q9NPC6 264 aa13.71□□□□□ -0.21
SLC48A1-209ENST00000552003 C6orf229H3BNL8 230 aa13.7□□□□□ -0.22
SLC48A1-209ENST00000552003 SLC4A2P04920 1241 aa13.7□□□□□ -0.22
SLC48A1-209ENST00000552003 PRKAR2BP31323 418 aa13.7□□□□□ -0.22
SLC48A1-209ENST00000552003 CRHR2Q13324 411 aa13.7□□□□□ -0.22
SLC48A1-209ENST00000552003 RSBN1LQ6PCB5 846 aaPredicted RBP13.7□□□□□ -0.22
SLC48A1-209ENST00000552003 TBC1D16Q8TBP0 767 aa13.7□□□□□ -0.22
SLC48A1-209ENST00000552003 SHISA4Q96DD7 197 aa13.7□□□□□ -0.22
SLC48A1-209ENST00000552003 ERO1AQ96HE7 468 aa13.7□□□□□ -0.22
SLC48A1-209ENST00000552003 THUMPD2Q9BTF0 503 aaKnown RBP13.7□□□□□ -0.22
SLC48A1-209ENST00000552003 RSPH6AQ9H0K4 717 aa13.7□□□□□ -0.22
SLC48A1-209ENST00000552003 KNSTRNQ9Y448 316 aa13.7□□□□□ -0.22
SLC48A1-209ENST00000552003 PTCH2Q9Y6C5 1203 aa13.7□□□□□ -0.22
SLC48A1-209ENST00000552003 ZSWIM8A7E2V4 1837 aa13.69□□□□□ -0.22
SLC48A1-209ENST00000552003 ALDH1A1P00352 501 aa13.69□□□□□ -0.22
SLC48A1-209ENST00000552003 PDIA6Q15084 440 aa13.68□□□□□ -0.22
SLC48A1-209ENST00000552003 NLRP10Q86W26 655 aa13.68□□□□□ -0.22
SLC48A1-209ENST00000552003 AGBL3Q8NEM8 1001 aa13.68□□□□□ -0.22
SLC48A1-209ENST00000552003 CLMNQ96JQ2 1002 aa13.68□□□□□ -0.22
SLC48A1-209ENST00000552003 PTPN18Q99952 460 aa13.68□□□□□ -0.22
SLC48A1-209ENST00000552003 ZNF646O15015 1829 aaPredicted RBP13.68□□□□□ -0.22
SLC48A1-209ENST00000552003 USP17L8P0C7I0 530 aa13.67□□□□□ -0.22
SLC48A1-209ENST00000552003 GJA5P36382 358 aa13.67□□□□□ -0.22
SLC48A1-209ENST00000552003 SLC4A8Q2Y0W8 1093 aa13.67□□□□□ -0.22
SLC48A1-209ENST00000552003 UBE2Q1Q7Z7E8 422 aa13.67□□□□□ -0.22
SLC48A1-209ENST00000552003 DPF3Q92784 378 aa13.67□□□□□ -0.22
SLC48A1-209ENST00000552003 EYSQ5T1H1 3165 aa13.67□□□□□ -0.22
SLC48A1-209ENST00000552003 MANSC4A6NHS7 340 aaPredicted RBP13.66□□□□□ -0.22
SLC48A1-209ENST00000552003 ANXA1P04083 346 aa13.66□□□□□ -0.22
SLC48A1-209ENST00000552003 EIF4A1P60842 406 aaKnown RBP13.66□□□□□ -0.22
SLC48A1-209ENST00000552003 SP3Q02447 781 aa13.66□□□□□ -0.22
SLC48A1-209ENST00000552003 TCIRG1Q13488 830 aa13.66□□□□□ -0.22
SLC48A1-209ENST00000552003 TAF7Q15545 349 aaPredicted RBP13.66□□□□□ -0.22
SLC48A1-209ENST00000552003 PROSER3Q2NL68 480 aa13.66□□□□□ -0.22
SLC48A1-209ENST00000552003 TMC4Q7Z404 712 aa13.66□□□□□ -0.22
SLC48A1-209ENST00000552003 SH3TC2Q8TF17 1288 aa13.66□□□□□ -0.22
SLC48A1-209ENST00000552003 MXD3Q9BW11 206 aa13.66□□□□□ -0.22
SLC48A1-209ENST00000552003 SLC9C1Q4G0N8 1177 aa13.65□□□□□ -0.22
SLC48A1-209ENST00000552003 Q7L0L9 218 aa13.65□□□□□ -0.22
SLC48A1-209ENST00000552003 WNK4Q96J92 1243 aa13.65□□□□□ -0.22
SLC48A1-209ENST00000552003 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.65□□□□□ -0.22
SLC48A1-209ENST00000552003 ANGEL1Q9UNK9 670 aaKnown RBP13.65□□□□□ -0.22
SLC48A1-209ENST00000552003 MUC3AQ02505 3323 aa13.65□□□□□ -0.22
SLC48A1-209ENST00000552003 TTC28Q96AY4 2481 aa13.65□□□□□ -0.22
SLC48A1-209ENST00000552003 SSC5DA1L4H1 1573 aa13.64□□□□□ -0.23
SLC48A1-209ENST00000552003 WNT10BO00744 389 aa13.64□□□□□ -0.23
SLC48A1-209ENST00000552003 HSPA5P11021 654 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms