RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 SHKBP1Q8TBC3 707 aa4.52□□□□□ -1.69
PTCH1-223ENST00000551623 CEP41Q9BYV8 373 aa4.52□□□□□ -1.69
PTCH1-223ENST00000551623 SOGA1O94964 1423 aa4.52□□□□□ -1.69
PTCH1-223ENST00000551623 DIP2BQ9P265 1576 aa4.52□□□□□ -1.69
PTCH1-223ENST00000551623 TGFBR3LH3BV60 316 aa4.51□□□□□ -1.69
PTCH1-223ENST00000551623 PPP1R12BO60237 982 aaPredicted RBP4.51□□□□□ -1.69
PTCH1-223ENST00000551623 RARAP10276 462 aa4.51□□□□□ -1.69
PTCH1-223ENST00000551623 TARSP26639 723 aaKnown RBP4.51□□□□□ -1.69
PTCH1-223ENST00000551623 NRLP54845 237 aa4.51□□□□□ -1.69
PTCH1-223ENST00000551623 WASHC4Q2M389 1173 aa4.51□□□□□ -1.69
PTCH1-223ENST00000551623 GDF6Q6KF10 455 aaPredicted RBP4.51□□□□□ -1.69
PTCH1-223ENST00000551623 IL22RA1Q8N6P7 574 aa4.51□□□□□ -1.69
PTCH1-223ENST00000551623 IL27Q8NEV9 243 aa4.51□□□□□ -1.69
PTCH1-223ENST00000551623 TPCN2Q8NHX9 752 aa4.51□□□□□ -1.69
PTCH1-223ENST00000551623 CCER1Q8TC90 406 aaPredicted RBP4.51□□□□□ -1.69
PTCH1-223ENST00000551623 CHMP7Q8WUX9 453 aaPredicted RBP4.51□□□□□ -1.69
PTCH1-223ENST00000551623 IFT43Q96FT9 208 aa4.51□□□□□ -1.69
PTCH1-223ENST00000551623 DMGDHQ9UI17 866 aaKnown RBP4.51□□□□□ -1.69
PTCH1-223ENST00000551623 ANGEL1Q9UNK9 670 aaKnown RBP4.51□□□□□ -1.69
PTCH1-223ENST00000551623 CEP170Q5SW79 1584 aa4.51□□□□□ -1.69
PTCH1-223ENST00000551623 KDM6BO15054 1643 aa4.5□□□□□ -1.69
PTCH1-223ENST00000551623 CCDC88BA6NC98 1476 aa4.5□□□□□ -1.69
PTCH1-223ENST00000551623 RAD54L2Q9Y4B4 1467 aa4.5□□□□□ -1.69
PTCH1-223ENST00000551623 WISP1O95388 367 aa4.5□□□□□ -1.69
PTCH1-223ENST00000551623 ITGB5P18084 799 aa4.5□□□□□ -1.69
PTCH1-223ENST00000551623 ARID4AP29374 1257 aaPredicted RBP4.5□□□□□ -1.69
PTCH1-223ENST00000551623 HOXA10P31260 410 aaPredicted RBP4.5□□□□□ -1.69
PTCH1-223ENST00000551623 SPOCD1Q6ZMY3 1216 aa4.5□□□□□ -1.69
PTCH1-223ENST00000551623 PLD4Q96BZ4 506 aa4.5□□□□□ -1.69
PTCH1-223ENST00000551623 FAM46AQ96IP4 442 aaKnown RBP4.5□□□□□ -1.69
PTCH1-223ENST00000551623 NGLY1Q96IV0 654 aa4.5□□□□□ -1.69
PTCH1-223ENST00000551623 MYRFLQ96LU7 910 aa4.5□□□□□ -1.69
PTCH1-223ENST00000551623 KIAA1024Q9UPX6 916 aa4.5□□□□□ -1.69
PTCH1-223ENST00000551623 ADGRL1O94910 1474 aa4.49□□□□□ -1.69
PTCH1-223ENST00000551623 GRIN2AQ12879 1464 aa4.49□□□□□ -1.69
PTCH1-223ENST00000551623 KRTAP9-7A8MTY7 169 aa4.49□□□□□ -1.69
PTCH1-223ENST00000551623 ZBTB7BO15156 539 aaPredicted RBP4.49□□□□□ -1.69
PTCH1-223ENST00000551623 C21orf2O43822 256 aa4.49□□□□□ -1.69
PTCH1-223ENST00000551623 JUNBP17275 347 aaPredicted RBP4.49□□□□□ -1.69
PTCH1-223ENST00000551623 CCDC102BQ68D86 513 aa4.49□□□□□ -1.69
PTCH1-223ENST00000551623 ACAD11Q709F0 780 aa4.49□□□□□ -1.69
PTCH1-223ENST00000551623 CLEC10AQ8IUN9 316 aa4.49□□□□□ -1.69
PTCH1-223ENST00000551623 STAG2Q8N3U4 1231 aa4.49□□□□□ -1.69
PTCH1-223ENST00000551623 FAM83CQ9BQN1 747 aa4.49□□□□□ -1.69
PTCH1-223ENST00000551623 C2orf49Q9BVC5 232 aaPredicted RBP4.49□□□□□ -1.69
PTCH1-223ENST00000551623 C11orf16Q9NQ32 467 aa4.49□□□□□ -1.69
PTCH1-223ENST00000551623 BCS1LQ9Y276 419 aa4.49□□□□□ -1.69
PTCH1-223ENST00000551623 FGD5Q6ZNL6 1462 aa4.49□□□□□ -1.69
PTCH1-223ENST00000551623 ABCA5Q8WWZ7 1642 aa4.48□□□□□ -1.69
PTCH1-223ENST00000551623 M0R2N6 131 aa4.48□□□□□ -1.69
PTCH1-223ENST00000551623 SASH3O75995 380 aa4.48□□□□□ -1.69
PTCH1-223ENST00000551623 INPP5BP32019 993 aa4.48□□□□□ -1.69
PTCH1-223ENST00000551623 ABL2P42684 1182 aa4.48□□□□□ -1.69
PTCH1-223ENST00000551623 RTN1Q16799 776 aa4.48□□□□□ -1.69
PTCH1-223ENST00000551623 LCE5AQ5TCM9 118 aa4.48□□□□□ -1.69
PTCH1-223ENST00000551623 TRIM50Q86XT4 487 aa4.48□□□□□ -1.69
PTCH1-223ENST00000551623 DEPDC4Q8N2C3 294 aa4.48□□□□□ -1.69
PTCH1-223ENST00000551623 NFATC2IPQ8NCF5 419 aa4.48□□□□□ -1.69
PTCH1-223ENST00000551623 GALNT11Q8NCW6 608 aa4.48□□□□□ -1.69
PTCH1-223ENST00000551623 GDPD2Q9HCC8 539 aa4.48□□□□□ -1.69
PTCH1-223ENST00000551623 PIM2Q9P1W9 311 aa4.48□□□□□ -1.69
PTCH1-223ENST00000551623 CCDC39Q9UFE4 941 aa4.48□□□□□ -1.69
PTCH1-223ENST00000551623 LMTK3Q96Q04 1460 aa4.48□□□□□ -1.69
PTCH1-223ENST00000551623 ABCA10Q8WWZ4 1543 aa4.47□□□□□ -1.69
PTCH1-223ENST00000551623 DBX1A6NMT0 343 aa4.47□□□□□ -1.69
PTCH1-223ENST00000551623 WDR64B1ANS9 1081 aa4.47□□□□□ -1.69
PTCH1-223ENST00000551623 J3QW42 95 aa4.47□□□□□ -1.69
PTCH1-223ENST00000551623 GHRHP01286 108 aa4.47□□□□□ -1.69
PTCH1-223ENST00000551623 IDH3AP50213 366 aa4.47□□□□□ -1.69
PTCH1-223ENST00000551623 ATP1A2P50993 1020 aa4.47□□□□□ -1.69
PTCH1-223ENST00000551623 MSMPQ1L6U9 139 aa4.47□□□□□ -1.69
PTCH1-223ENST00000551623 FAM20CQ8IXL6 584 aa4.47□□□□□ -1.69
PTCH1-223ENST00000551623 MUC3BQ9H195 1237 aa4.47□□□□□ -1.69
PTCH1-223ENST00000551623 TLR7Q9NYK1 1049 aaKnown RBP4.47□□□□□ -1.69
PTCH1-223ENST00000551623 ATAD2Q6PL18 1390 aa4.46□□□□□ -1.7
PTCH1-223ENST00000551623 LOC102724428A0A0B4J2F2 783 aa4.46□□□□□ -1.7
PTCH1-223ENST00000551623 USP17L5A8MUK1 530 aa4.46□□□□□ -1.7
PTCH1-223ENST00000551623 CD68P34810 354 aaPredicted RBP4.46□□□□□ -1.7
PTCH1-223ENST00000551623 ARSDP51689 593 aa4.46□□□□□ -1.7
PTCH1-223ENST00000551623 SIK1P57059 783 aa4.46□□□□□ -1.7
PTCH1-223ENST00000551623 CLDN10P78369 228 aa4.46□□□□□ -1.7
PTCH1-223ENST00000551623 ZNF124Q15973 351 aa4.46□□□□□ -1.7
PTCH1-223ENST00000551623 ZNF648Q5T619 568 aaPredicted RBP4.46□□□□□ -1.7
PTCH1-223ENST00000551623 NFXL1Q6ZNB6 911 aa4.46□□□□□ -1.7
PTCH1-223ENST00000551623 BEND4Q6ZU67 534 aa4.46□□□□□ -1.7
PTCH1-223ENST00000551623 VSIG10LQ86VR7 867 aa4.46□□□□□ -1.7
PTCH1-223ENST00000551623 TP53INP2Q8IXH6 220 aa4.46□□□□□ -1.7
PTCH1-223ENST00000551623 CACTIN-AS1Q8N1I8 211 aa4.46□□□□□ -1.7
PTCH1-223ENST00000551623 TSEN2Q8NCE0 465 aaKnown RBP4.46□□□□□ -1.7
PTCH1-223ENST00000551623 FBXL18Q96ME1 805 aa4.46□□□□□ -1.7
PTCH1-223ENST00000551623 KCNF1Q9H3M0 494 aa4.46□□□□□ -1.7
PTCH1-223ENST00000551623 TRIM33Q9UPN9 1127 aa4.46□□□□□ -1.7
PTCH1-223ENST00000551623 PPME1Q9Y570 386 aa4.46□□□□□ -1.7
PTCH1-223ENST00000551623 PRNPP04156 253 aa4.45□□□□□ -1.7
PTCH1-223ENST00000551623 BMP3P12645 472 aa4.45□□□□□ -1.7
PTCH1-223ENST00000551623 FAM69CQ0P6D2 419 aa4.45□□□□□ -1.7
PTCH1-223ENST00000551623 COL19A1Q14993 1142 aa4.45□□□□□ -1.7
PTCH1-223ENST00000551623 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.45□□□□□ -1.7
PTCH1-223ENST00000551623 KIAA1211Q6ZU35 1233 aa4.45□□□□□ -1.7
PTCH1-223ENST00000551623 GAS2L2Q8NHY3 880 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms