RNA–Protein interactions for RNA: ENST00000551219.5

PTPRR-211, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best)

Gene PTPRR, Length 2,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-211ENST00000551219 BICD2Q8TD16 824 aa7.87□□□□□ -1.15
PTPRR-211ENST00000551219 GTF3C6Q969F1 213 aa7.87□□□□□ -1.15
PTPRR-211ENST00000551219 LTV1Q96GA3 475 aaPredicted RBP7.87□□□□□ -1.15
PTPRR-211ENST00000551219 FAM227BQ96M60 508 aa7.87□□□□□ -1.15
PTPRR-211ENST00000551219 LLPHQ9BRT6 129 aaKnown RBP7.87□□□□□ -1.15
PTPRR-211ENST00000551219 OGFRQ9NZT2 677 aa7.87□□□□□ -1.15
PTPRR-211ENST00000551219 CBX1P83916 185 aa7.86□□□□□ -1.15
PTPRR-211ENST00000551219 CAMK4Q16566 473 aa7.86□□□□□ -1.15
PTPRR-211ENST00000551219 ATP2B3Q16720 1220 aa7.86□□□□□ -1.15
PTPRR-211ENST00000551219 LARP1Q6PKG0 1096 aaKnown RBP7.86□□□□□ -1.15
PTPRR-211ENST00000551219 TICAM2Q86XR7 235 aa7.86□□□□□ -1.15
PTPRR-211ENST00000551219 JARID2Q92833 1246 aaPredicted RBP7.86□□□□□ -1.15
PTPRR-211ENST00000551219 CHMP4CQ96CF2 233 aa7.86□□□□□ -1.15
PTPRR-211ENST00000551219 MRFAP1L1Q96HT8 127 aa7.86□□□□□ -1.15
PTPRR-211ENST00000551219 PRDM10Q9NQV6 1147 aa7.86□□□□□ -1.15
PTPRR-211ENST00000551219 CLIP2Q9UDT6 1046 aa7.86□□□□□ -1.15
PTPRR-211ENST00000551219 IVNS1ABPQ9Y6Y0 642 aa7.86□□□□□ -1.15
PTPRR-211ENST00000551219 RGPD8O14715 1765 aaPredicted RBP7.86□□□□□ -1.15
PTPRR-211ENST00000551219 A0A0D9SFI3 127 aa7.86□□□□□ -1.15
PTPRR-211ENST00000551219 GOLGA6L19H0YKK7 550 aa7.86□□□□□ -1.15
PTPRR-211ENST00000551219 SASH1O94885 1247 aa7.86□□□□□ -1.15
PTPRR-211ENST00000551219 TNNT1P13805 278 aa7.86□□□□□ -1.15
PTPRR-211ENST00000551219 NCBP1Q09161 790 aaKnown RBP7.86□□□□□ -1.15
PTPRR-211ENST00000551219 DHX8Q14562 1220 aaKnown RBP7.86□□□□□ -1.15
PTPRR-211ENST00000551219 STX1AQ16623 288 aa7.86□□□□□ -1.15
PTPRR-211ENST00000551219 ZNF530Q6P9A1 599 aaPredicted RBP7.86□□□□□ -1.15
PTPRR-211ENST00000551219 FERMT3Q86UX7 667 aa7.86□□□□□ -1.15
PTPRR-211ENST00000551219 CCDC125Q86Z20 511 aa7.86□□□□□ -1.15
PTPRR-211ENST00000551219 CKAP2LQ8IYA6 745 aa7.86□□□□□ -1.15
PTPRR-211ENST00000551219 CCDC112Q8NEF3 446 aa7.86□□□□□ -1.15
PTPRR-211ENST00000551219 LTN1O94822 1766 aa7.86□□□□□ -1.15
PTPRR-211ENST00000551219 ABCB7O75027 752 aa7.86□□□□□ -1.15
PTPRR-211ENST00000551219 RFX1P22670 979 aa7.86□□□□□ -1.15
PTPRR-211ENST00000551219 RBM6P78332 1123 aaKnown RBP7.86□□□□□ -1.15
PTPRR-211ENST00000551219 NAA16Q6N069 864 aaPredicted RBP7.86□□□□□ -1.15
PTPRR-211ENST00000551219 KCNH5Q8NCM2 988 aa7.86□□□□□ -1.15
PTPRR-211ENST00000551219 EAF2Q96CJ1 260 aaPredicted RBP7.86□□□□□ -1.15
PTPRR-211ENST00000551219 LGR6Q9HBX8 967 aa7.86□□□□□ -1.15
PTPRR-211ENST00000551219 KCND1Q9NSA2 647 aa7.86□□□□□ -1.15
PTPRR-211ENST00000551219 PPP1R1BQ9UD71 204 aaPredicted RBP7.86□□□□□ -1.15
PTPRR-211ENST00000551219 PA2G4Q9UQ80 394 aaKnown RBP7.86□□□□□ -1.15
PTPRR-211ENST00000551219 KIF2AO00139 706 aaPredicted RBP7.85□□□□□ -1.15
PTPRR-211ENST00000551219 RNMTO43148 476 aaKnown RBP7.85□□□□□ -1.15
PTPRR-211ENST00000551219 GABPB1Q06547 395 aaPredicted RBP7.85□□□□□ -1.15
PTPRR-211ENST00000551219 TAF7LQ5H9L4 462 aa7.85□□□□□ -1.15
PTPRR-211ENST00000551219 USHBP1Q8N6Y0 703 aa7.85□□□□□ -1.15
PTPRR-211ENST00000551219 SUCLG2Q96I99 432 aa7.85□□□□□ -1.15
PTPRR-211ENST00000551219 H3BQV1 296 aa7.85□□□□□ -1.15
PTPRR-211ENST00000551219 NR1I2O75469 434 aa7.85□□□□□ -1.15
PTPRR-211ENST00000551219 TAF5LO75529 589 aa7.85□□□□□ -1.15
PTPRR-211ENST00000551219 TPD52L1Q16890 204 aaPredicted RBP7.85□□□□□ -1.15
PTPRR-211ENST00000551219 C1orf141Q5JVX7 400 aa7.85□□□□□ -1.15
PTPRR-211ENST00000551219 IFFO2Q5TF58 517 aa7.85□□□□□ -1.15
PTPRR-211ENST00000551219 PGBD1Q96JS3 809 aa7.85□□□□□ -1.15
PTPRR-211ENST00000551219 NEK1Q96PY6 1258 aa7.85□□□□□ -1.15
PTPRR-211ENST00000551219 KIAA1522Q9P206 1035 aaPredicted RBP7.85□□□□□ -1.15
PTPRR-211ENST00000551219 CHMP3Q9Y3E7 222 aa7.85□□□□□ -1.15
PTPRR-211ENST00000551219 COL15A1P39059 1388 aa7.84□□□□□ -1.15
PTPRR-211ENST00000551219 KCNQ3O43525 872 aa7.84□□□□□ -1.15
PTPRR-211ENST00000551219 ATP5JP18859 108 aa7.84□□□□□ -1.15
PTPRR-211ENST00000551219 TAF3Q5VWG9 929 aa7.84□□□□□ -1.15
PTPRR-211ENST00000551219 NBPF6Q5VWK0 638 aa7.84□□□□□ -1.15
PTPRR-211ENST00000551219 CEP135Q66GS9 1140 aa7.84□□□□□ -1.15
PTPRR-211ENST00000551219 SMYD5Q6GMV2 418 aa7.84□□□□□ -1.15
PTPRR-211ENST00000551219 SMARCC2Q8TAQ2 1214 aa7.84□□□□□ -1.15
PTPRR-211ENST00000551219 NBPF4Q96M43 638 aa7.84□□□□□ -1.15
PTPRR-211ENST00000551219 C16orf45Q96MC5 204 aaPredicted RBP7.84□□□□□ -1.15
PTPRR-211ENST00000551219 MFRPQ9BY79 579 aa7.84□□□□□ -1.15
PTPRR-211ENST00000551219 DNAJC25Q9H1X3 360 aa7.84□□□□□ -1.15
PTPRR-211ENST00000551219 BICC1Q9H694 974 aaKnown RBP7.84□□□□□ -1.15
PTPRR-211ENST00000551219 DDX21Q9NR30 783 aaKnown RBP eCLIP7.84□□□□□ -1.15
PTPRR-211ENST00000551219 TFIP11Q9UBB9 837 aaKnown RBP7.84□□□□□ -1.15
PTPRR-211ENST00000551219 FAM177BA6PVY3 158 aa7.84□□□□□ -1.15
PTPRR-211ENST00000551219 LRMPQ12912 555 aa7.84□□□□□ -1.15
PTPRR-211ENST00000551219 IQCB1Q15051 598 aa7.84□□□□□ -1.15
PTPRR-211ENST00000551219 NUTM2GQ5VZR2 741 aa7.84□□□□□ -1.15
PTPRR-211ENST00000551219 FAM173BQ6P4H8 233 aa7.84□□□□□ -1.15
PTPRR-211ENST00000551219 BRF1Q92994 677 aa7.84□□□□□ -1.15
PTPRR-211ENST00000551219 CCDC102AQ96A19 550 aa7.84□□□□□ -1.15
PTPRR-211ENST00000551219 ZNF396Q96N95 335 aaPredicted RBP7.84□□□□□ -1.15
PTPRR-211ENST00000551219 CCDC8Q9H0W5 538 aaPredicted RBP7.84□□□□□ -1.15
PTPRR-211ENST00000551219 ANO10Q9NW15 660 aa7.84□□□□□ -1.15
PTPRR-211ENST00000551219 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.83□□□□□ -1.16
PTPRR-211ENST00000551219 U2AF2P26368 475 aaKnown RBP eCLIP7.83□□□□□ -1.16
PTPRR-211ENST00000551219 GSDMDP57764 484 aa7.83□□□□□ -1.16
PTPRR-211ENST00000551219 CCDC73Q6ZRK6 1079 aa7.83□□□□□ -1.16
PTPRR-211ENST00000551219 LRRC8AQ8IWT6 810 aa7.83□□□□□ -1.16
PTPRR-211ENST00000551219 DDX54Q8TDD1 881 aaKnown RBP7.83□□□□□ -1.16
PTPRR-211ENST00000551219 CACTINQ8WUQ7 758 aaKnown RBP7.83□□□□□ -1.16
PTPRR-211ENST00000551219 NAT10Q9H0A0 1025 aaKnown RBP7.83□□□□□ -1.16
PTPRR-211ENST00000551219 BOLA2Q9H3K6 86 aa7.83□□□□□ -1.16
PTPRR-211ENST00000551219 CTNNA3Q9UI47 895 aa7.83□□□□□ -1.16
PTPRR-211ENST00000551219 RCOR1Q9UKL0 485 aa7.83□□□□□ -1.16
PTPRR-211ENST00000551219 ADAMTS7Q9UKP4 1686 aa7.83□□□□□ -1.16
PTPRR-211ENST00000551219 CAMTA1Q9Y6Y1 1673 aa7.83□□□□□ -1.16
PTPRR-211ENST00000551219 PFKFB2O60825 505 aa7.83□□□□□ -1.16
PTPRR-211ENST00000551219 ANXA1P04083 346 aa7.83□□□□□ -1.16
PTPRR-211ENST00000551219 NEXNQ0ZGT2 675 aa7.83□□□□□ -1.16
PTPRR-211ENST00000551219 CWF19L2Q2TBE0 894 aaKnown RBP7.83□□□□□ -1.16
PTPRR-211ENST00000551219 THEMISQ8N1K5 641 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms