RNA–Protein interactions for RNA: ENST00000550804.5

CALCOCO1-218, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CALCOCO1, Length 2,291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-218ENST00000550804 TEX13AQ9BXU3 409 aaPredicted RBP16.9■□□□□ 0.3
CALCOCO1-218ENST00000550804 WNK3Q9BYP7 1800 aa16.9■□□□□ 0.3
CALCOCO1-218ENST00000550804 ARFGEF2Q9Y6D5 1785 aa16.9■□□□□ 0.3
CALCOCO1-218ENST00000550804 KAT6BQ8WYB5 2073 aa16.9■□□□□ 0.3
CALCOCO1-218ENST00000550804 MCMDC2Q4G0Z9 681 aa16.9■□□□□ 0.3
CALCOCO1-218ENST00000550804 CDC37L1Q7L3B6 337 aa16.9■□□□□ 0.3
CALCOCO1-218ENST00000550804 FAM89AQ96GI7 184 aa16.9■□□□□ 0.3
CALCOCO1-218ENST00000550804 TMEM87AQ8NBN3 555 aa16.89■□□□□ 0.29
CALCOCO1-218ENST00000550804 PDLIM2Q96JY6 352 aa16.89■□□□□ 0.29
CALCOCO1-218ENST00000550804 LRP6O75581 1613 aa16.89■□□□□ 0.29
CALCOCO1-218ENST00000550804 KBTBD3Q8NAB2 608 aa16.89■□□□□ 0.29
CALCOCO1-218ENST00000550804 CCDC191Q8NCU4 936 aa16.89■□□□□ 0.29
CALCOCO1-218ENST00000550804 TSPY26PQ9H489 355 aa16.89■□□□□ 0.29
CALCOCO1-218ENST00000550804 TSGA10IPQ3SY00 556 aa16.88■□□□□ 0.29
CALCOCO1-218ENST00000550804 MARCH10Q8NA82 808 aaPredicted RBP16.88■□□□□ 0.29
CALCOCO1-218ENST00000550804 NEK1Q96PY6 1258 aa16.88■□□□□ 0.29
CALCOCO1-218ENST00000550804 PAG1Q9NWQ8 432 aa16.88■□□□□ 0.29
CALCOCO1-218ENST00000550804 A0A1B0GUL7 405 aa16.87■□□□□ 0.29
CALCOCO1-218ENST00000550804 EYA2O00167 538 aa16.87■□□□□ 0.29
CALCOCO1-218ENST00000550804 JAK2O60674 1132 aa16.87■□□□□ 0.29
CALCOCO1-218ENST00000550804 PPFIA3O75145 1194 aa16.87■□□□□ 0.29
CALCOCO1-218ENST00000550804 UBE2HP62256 183 aa16.87■□□□□ 0.29
CALCOCO1-218ENST00000550804 BARGINQ6ZT62 677 aa16.87■□□□□ 0.29
CALCOCO1-218ENST00000550804 STOX1Q6ZVD7 989 aa16.87■□□□□ 0.29
CALCOCO1-218ENST00000550804 MPNDQ8N594 471 aa16.87■□□□□ 0.29
CALCOCO1-218ENST00000550804 STARD3NLO95772 234 aa16.87■□□□□ 0.29
CALCOCO1-218ENST00000550804 Q6ZUG5 572 aa16.87■□□□□ 0.29
CALCOCO1-218ENST00000550804 SYAP1Q96A49 352 aaPredicted RBP16.87■□□□□ 0.29
CALCOCO1-218ENST00000550804 IL15P40933 162 aaPredicted RBP16.86■□□□□ 0.29
CALCOCO1-218ENST00000550804 NAP1L5Q96NT1 182 aaPredicted RBP16.86■□□□□ 0.29
CALCOCO1-218ENST00000550804 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.86■□□□□ 0.29
CALCOCO1-218ENST00000550804 HMG20BQ9P0W2 317 aa16.86■□□□□ 0.29
CALCOCO1-218ENST00000550804 TFIP11Q9UBB9 837 aaKnown RBP16.86■□□□□ 0.29
CALCOCO1-218ENST00000550804 NWD2Q9ULI1 1742 aa16.86■□□□□ 0.29
CALCOCO1-218ENST00000550804 JCADQ9P266 1359 aa16.86■□□□□ 0.29
CALCOCO1-218ENST00000550804 GIMAP6Q6P9H5 292 aa16.86■□□□□ 0.29
CALCOCO1-218ENST00000550804 ZSCAN30Q86W11 494 aa16.86■□□□□ 0.29
CALCOCO1-218ENST00000550804 DDX11Q96FC9 970 aa16.86■□□□□ 0.29
CALCOCO1-218ENST00000550804 ATP6V1DQ9Y5K8 247 aa16.86■□□□□ 0.29
CALCOCO1-218ENST00000550804 TCHHQ07283 1943 aa16.85■□□□□ 0.29
CALCOCO1-218ENST00000550804 ADORA1P30542 326 aa16.85■□□□□ 0.29
CALCOCO1-218ENST00000550804 FKBP4Q02790 459 aaKnown RBP eCLIP16.85■□□□□ 0.29
CALCOCO1-218ENST00000550804 TCIRG1Q13488 830 aa16.85■□□□□ 0.29
CALCOCO1-218ENST00000550804 NGLY1Q96IV0 654 aa16.85■□□□□ 0.29
CALCOCO1-218ENST00000550804 C8orf37Q96NL8 207 aa16.85■□□□□ 0.29
CALCOCO1-218ENST00000550804 AFDNP55196 1824 aaKnown RBP16.85■□□□□ 0.29
CALCOCO1-218ENST00000550804 CYP19A1P11511 503 aaPredicted RBP16.85■□□□□ 0.29
CALCOCO1-218ENST00000550804 GPTP24298 496 aa16.85■□□□□ 0.29
CALCOCO1-218ENST00000550804 ANKRD1Q15327 319 aa16.85■□□□□ 0.29
CALCOCO1-218ENST00000550804 HLFQ16534 295 aa16.85■□□□□ 0.29
CALCOCO1-218ENST00000550804 CHST3Q7LGC8 479 aa16.85■□□□□ 0.29
CALCOCO1-218ENST00000550804 ISCA1Q9BUE6 129 aa16.85■□□□□ 0.29
CALCOCO1-218ENST00000550804 NUP188Q5SRE5 1749 aa16.84■□□□□ 0.29
CALCOCO1-218ENST00000550804 IFIT1P09914 478 aaKnown RBP16.84■□□□□ 0.29
CALCOCO1-218ENST00000550804 CCDC183Q5T5S1 534 aa16.84■□□□□ 0.29
CALCOCO1-218ENST00000550804 TTLL5Q6EMB2 1281 aa16.84■□□□□ 0.29
CALCOCO1-218ENST00000550804 TTC6Q86TZ1 520 aa16.84■□□□□ 0.29
CALCOCO1-218ENST00000550804 BRF1Q92994 677 aa16.84■□□□□ 0.29
CALCOCO1-218ENST00000550804 ACSBG1Q96GR2 724 aa16.84■□□□□ 0.29
CALCOCO1-218ENST00000550804 CCDC57Q2TAC2 916 aa16.84■□□□□ 0.29
CALCOCO1-218ENST00000550804 ALDH8A1Q9H2A2 487 aaPredicted RBP16.84■□□□□ 0.29
CALCOCO1-218ENST00000550804 U3KPZ7 1027 aaPredicted RBP16.84■□□□□ 0.29
CALCOCO1-218ENST00000550804 BCL9LQ86UU0 1499 aa16.83■□□□□ 0.29
CALCOCO1-218ENST00000550804 HCLS1P14317 486 aaPredicted RBP16.83■□□□□ 0.28
CALCOCO1-218ENST00000550804 PI16Q6UXB8 463 aa16.83■□□□□ 0.28
CALCOCO1-218ENST00000550804 PKNOX2Q96KN3 472 aa16.83■□□□□ 0.28
CALCOCO1-218ENST00000550804 HSPD1P10809 573 aaKnown RBP16.82■□□□□ 0.28
CALCOCO1-218ENST00000550804 HSP90B1P14625 803 aaKnown RBP16.82■□□□□ 0.28
CALCOCO1-218ENST00000550804 SCARF1Q14162 830 aa16.82■□□□□ 0.28
CALCOCO1-218ENST00000550804 CEP126Q9P2H0 1117 aa16.82■□□□□ 0.28
CALCOCO1-218ENST00000550804 DOT1LQ8TEK3 1739 aa16.82■□□□□ 0.28
CALCOCO1-218ENST00000550804 FAM98CQ17RN3 349 aaKnown RBP16.82■□□□□ 0.28
CALCOCO1-218ENST00000550804 HSP90AB3PQ58FF7 597 aa16.82■□□□□ 0.28
CALCOCO1-218ENST00000550804 OSBP2Q969R2 916 aa16.82■□□□□ 0.28
CALCOCO1-218ENST00000550804 PHF14O94880 888 aa16.81■□□□□ 0.28
CALCOCO1-218ENST00000550804 SCRN1Q12765 414 aa16.81■□□□□ 0.28
CALCOCO1-218ENST00000550804 KRT32Q14532 448 aa16.81■□□□□ 0.28
CALCOCO1-218ENST00000550804 VPS72Q15906 364 aa16.81■□□□□ 0.28
CALCOCO1-218ENST00000550804 ZMYM1Q5SVZ6 1142 aa16.81■□□□□ 0.28
CALCOCO1-218ENST00000550804 GTF3C6Q969F1 213 aa16.81■□□□□ 0.28
CALCOCO1-218ENST00000550804 XAGE2Q96GT9 111 aa16.81■□□□□ 0.28
CALCOCO1-218ENST00000550804 GPR108Q9NPR9 543 aa16.81■□□□□ 0.28
CALCOCO1-218ENST00000550804 M0R2C6 588 aa16.81■□□□□ 0.28
CALCOCO1-218ENST00000550804 FOSBP53539 338 aa16.81■□□□□ 0.28
CALCOCO1-218ENST00000550804 FGD1P98174 961 aa16.81■□□□□ 0.28
CALCOCO1-218ENST00000550804 CAMK4Q16566 473 aa16.81■□□□□ 0.28
CALCOCO1-218ENST00000550804 FNBP4Q8N3X1 1017 aaPredicted RBP16.81■□□□□ 0.28
CALCOCO1-218ENST00000550804 NOL7Q9UMY1 257 aaKnown RBP16.81■□□□□ 0.28
CALCOCO1-218ENST00000550804 ZBTB1Q9Y2K1 713 aa16.81■□□□□ 0.28
CALCOCO1-218ENST00000550804 A0A0G2JS52 829 aa16.8■□□□□ 0.28
CALCOCO1-218ENST00000550804 LIG1P18858 919 aa16.8■□□□□ 0.28
CALCOCO1-218ENST00000550804 MSNP26038 577 aaKnown RBP16.8■□□□□ 0.28
CALCOCO1-218ENST00000550804 APOBRQ0VD83 1088 aa16.8■□□□□ 0.28
CALCOCO1-218ENST00000550804 MAST3O60307 1309 aa16.8■□□□□ 0.28
CALCOCO1-218ENST00000550804 SH3TC1Q8TE82 1336 aa16.8■□□□□ 0.28
CALCOCO1-218ENST00000550804 RNF113AO15541 343 aaKnown RBP16.8■□□□□ 0.28
CALCOCO1-218ENST00000550804 CCT2P78371 535 aaKnown RBP16.8■□□□□ 0.28
CALCOCO1-218ENST00000550804 GORABQ5T7V8 394 aa16.8■□□□□ 0.28
CALCOCO1-218ENST00000550804 KIF6Q6ZMV9 814 aa16.8■□□□□ 0.28
CALCOCO1-218ENST00000550804 CERKQ8TCT0 537 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms