RNA–Protein interactions for RNA: ENST00000550716.1

ATP2B1-207, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2B1, Length 486 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-207ENST00000550716 TEX13AQ9BXU3 409 aaPredicted RBP11.65□□□□□ -0.54
ATP2B1-207ENST00000550716 TMEM134Q9H6X4 195 aa11.65□□□□□ -0.54
ATP2B1-207ENST00000550716 PLA2G2EQ9NZK7 142 aa11.65□□□□□ -0.54
ATP2B1-207ENST00000550716 U2AF1L5P0DN76 240 aaPredicted RBP11.64□□□□□ -0.55
ATP2B1-207ENST00000550716 SRGNP10124 158 aa11.64□□□□□ -0.55
ATP2B1-207ENST00000550716 VEGFAP15692 232 aaPredicted RBP11.64□□□□□ -0.55
ATP2B1-207ENST00000550716 PDE6BP35913 854 aa11.64□□□□□ -0.55
ATP2B1-207ENST00000550716 U2AF1Q01081 240 aaKnown RBP eCLIP11.64□□□□□ -0.55
ATP2B1-207ENST00000550716 COL13A1Q5TAT6 717 aaPredicted RBP11.64□□□□□ -0.55
ATP2B1-207ENST00000550716 PRPF40BQ6NWY9 871 aaKnown RBP11.64□□□□□ -0.55
ATP2B1-207ENST00000550716 OLFM4Q6UX06 510 aa11.64□□□□□ -0.55
ATP2B1-207ENST00000550716 SETDB2Q96T68 719 aa11.64□□□□□ -0.55
ATP2B1-207ENST00000550716 MAP2K5Q13163 448 aa11.63□□□□□ -0.55
ATP2B1-207ENST00000550716 ERFEQ4G0M1 354 aa11.63□□□□□ -0.55
ATP2B1-207ENST00000550716 CFAP53Q96M91 514 aa11.63□□□□□ -0.55
ATP2B1-207ENST00000550716 MIS18AQ9NYP9 233 aa11.63□□□□□ -0.55
ATP2B1-207ENST00000550716 SLX4Q8IY92 1834 aa11.63□□□□□ -0.55
ATP2B1-207ENST00000550716 FER1L6Q2WGJ9 1857 aa11.62□□□□□ -0.55
ATP2B1-207ENST00000550716 DDNO94850 711 aaPredicted RBP11.62□□□□□ -0.55
ATP2B1-207ENST00000550716 STYK1Q6J9G0 422 aa11.62□□□□□ -0.55
ATP2B1-207ENST00000550716 SLC51AQ86UW1 340 aa11.62□□□□□ -0.55
ATP2B1-207ENST00000550716 C7orf43Q8WVR3 580 aa11.62□□□□□ -0.55
ATP2B1-207ENST00000550716 TAOK3Q9H2K8 898 aa11.62□□□□□ -0.55
ATP2B1-207ENST00000550716 LTBP3Q9NS15 1303 aa11.61□□□□□ -0.55
ATP2B1-207ENST00000550716 FAM177BA6PVY3 158 aa11.61□□□□□ -0.55
ATP2B1-207ENST00000550716 NPHP1O15259 732 aa11.61□□□□□ -0.55
ATP2B1-207ENST00000550716 SNRPA1P09661 255 aaKnown RBP11.61□□□□□ -0.55
ATP2B1-207ENST00000550716 ST5P78524 1137 aa11.61□□□□□ -0.55
ATP2B1-207ENST00000550716 HLFQ16534 295 aa11.61□□□□□ -0.55
ATP2B1-207ENST00000550716 NBPF5PQ86XG9 351 aaPredicted RBP11.61□□□□□ -0.55
ATP2B1-207ENST00000550716 MASTLQ96GX5 879 aa11.61□□□□□ -0.55
ATP2B1-207ENST00000550716 PDZRN3Q9UPQ7 1066 aa11.61□□□□□ -0.55
ATP2B1-207ENST00000550716 CCDC88AQ3V6T2 1871 aa11.6□□□□□ -0.55
ATP2B1-207ENST00000550716 ABCC12Q96J65 1359 aa11.6□□□□□ -0.55
ATP2B1-207ENST00000550716 NLRP7Q8WX94 980 aa11.6□□□□□ -0.55
ATP2B1-207ENST00000550716 RTF1Q92541 710 aaKnown RBP11.6□□□□□ -0.55
ATP2B1-207ENST00000550716 NECTIN2Q92692 538 aa11.6□□□□□ -0.55
ATP2B1-207ENST00000550716 CNKSR1Q969H4 720 aa11.6□□□□□ -0.55
ATP2B1-207ENST00000550716 NUDCQ9Y266 331 aa11.6□□□□□ -0.55
ATP2B1-207ENST00000550716 ZNF541Q9H0D2 1346 aa11.6□□□□□ -0.55
ATP2B1-207ENST00000550716 KLRG2A4D1S0 409 aaPredicted RBP11.59□□□□□ -0.55
ATP2B1-207ENST00000550716 NPM2Q86SE8 214 aaKnown RBP11.59□□□□□ -0.55
ATP2B1-207ENST00000550716 THUMPD2Q9BTF0 503 aaKnown RBP11.59□□□□□ -0.55
ATP2B1-207ENST00000550716 NIP7Q9Y221 180 aaKnown RBP eCLIP11.59□□□□□ -0.55
ATP2B1-207ENST00000550716 CACNA1SQ13698 1873 aa11.59□□□□□ -0.55
ATP2B1-207ENST00000550716 ARFGEF2Q9Y6D5 1785 aa11.59□□□□□ -0.55
ATP2B1-207ENST00000550716 HSPA1AP0DMV8 641 aaKnown RBP11.58□□□□□ -0.56
ATP2B1-207ENST00000550716 HSPA1BP0DMV9 641 aaKnown RBP11.58□□□□□ -0.56
ATP2B1-207ENST00000550716 CLEC4GQ6UXB4 293 aa11.58□□□□□ -0.56
ATP2B1-207ENST00000550716 ZNF277Q9NRM2 450 aaPredicted RBP11.58□□□□□ -0.56
ATP2B1-207ENST00000550716 SNED1Q8TER0 1413 aa11.58□□□□□ -0.56
ATP2B1-207ENST00000550716 COL4A5P29400 1685 aa11.57□□□□□ -0.56
ATP2B1-207ENST00000550716 NPR1P16066 1061 aa11.57□□□□□ -0.56
ATP2B1-207ENST00000550716 CCDC93Q567U6 631 aa11.57□□□□□ -0.56
ATP2B1-207ENST00000550716 TTLL7Q6ZT98 887 aa11.57□□□□□ -0.56
ATP2B1-207ENST00000550716 NGEFQ8N5V2 710 aa11.57□□□□□ -0.56
ATP2B1-207ENST00000550716 ZC3H15Q8WU90 426 aaKnown RBP11.57□□□□□ -0.56
ATP2B1-207ENST00000550716 CCDC102AQ96A19 550 aa11.57□□□□□ -0.56
ATP2B1-207ENST00000550716 PHOX2BQ99453 314 aa11.57□□□□□ -0.56
ATP2B1-207ENST00000550716 ZNF652Q9Y2D9 606 aa11.57□□□□□ -0.56
ATP2B1-207ENST00000550716 DICER1Q9UPY3 1922 aaKnown RBP11.56□□□□□ -0.56
ATP2B1-207ENST00000550716 HTATSF1O43719 755 aaKnown RBP11.56□□□□□ -0.56
ATP2B1-207ENST00000550716 FKBP4Q02790 459 aaKnown RBP eCLIP11.56□□□□□ -0.56
ATP2B1-207ENST00000550716 TAF7Q15545 349 aaPredicted RBP11.56□□□□□ -0.56
ATP2B1-207ENST00000550716 NUTM1Q86Y26 1132 aa11.56□□□□□ -0.56
ATP2B1-207ENST00000550716 PLEKHF1Q96S99 279 aa11.56□□□□□ -0.56
ATP2B1-207ENST00000550716 MKRN1Q9UHC7 482 aaKnown RBP11.56□□□□□ -0.56
ATP2B1-207ENST00000550716 LAMB4A4D0S4 1761 aa11.56□□□□□ -0.56
ATP2B1-207ENST00000550716 KDM3BQ7LBC6 1761 aa11.56□□□□□ -0.56
ATP2B1-207ENST00000550716 UBN2Q6ZU65 1347 aa11.56□□□□□ -0.56
ATP2B1-207ENST00000550716 EIF4A1P60842 406 aaKnown RBP11.55□□□□□ -0.56
ATP2B1-207ENST00000550716 SOGA3Q5TF21 947 aa11.55□□□□□ -0.56
ATP2B1-207ENST00000550716 TPTE2Q6XPS3 522 aa11.55□□□□□ -0.56
ATP2B1-207ENST00000550716 TAF1DQ9H5J8 278 aaPredicted RBP11.55□□□□□ -0.56
ATP2B1-207ENST00000550716 IRF6O14896 467 aa11.54□□□□□ -0.56
ATP2B1-207ENST00000550716 GPTP24298 496 aa11.54□□□□□ -0.56
ATP2B1-207ENST00000550716 TNS4Q8IZW8 715 aa11.54□□□□□ -0.56
ATP2B1-207ENST00000550716 RRP7AQ9Y3A4 280 aaKnown RBP11.54□□□□□ -0.56
ATP2B1-207ENST00000550716 PASKQ96RG2 1323 aa11.54□□□□□ -0.56
ATP2B1-207ENST00000550716 ITGBL1O95965 494 aaPredicted RBP11.53□□□□□ -0.56
ATP2B1-207ENST00000550716 MYL6BP14649 208 aa11.53□□□□□ -0.56
ATP2B1-207ENST00000550716 NFE2L2Q16236 605 aa11.53□□□□□ -0.56
ATP2B1-207ENST00000550716 CRY2Q49AN0 593 aa11.53□□□□□ -0.56
ATP2B1-207ENST00000550716 ZBTB3Q9H5J0 574 aa11.53□□□□□ -0.56
ATP2B1-207ENST00000550716 RNF123Q5XPI4 1314 aa11.53□□□□□ -0.56
ATP2B1-207ENST00000550716 MAP3K15Q6ZN16 1313 aa11.53□□□□□ -0.56
ATP2B1-207ENST00000550716 ADAMTSL1Q8N6G6 1762 aa11.52□□□□□ -0.57
ATP2B1-207ENST00000550716 CFHP08603 1231 aa11.52□□□□□ -0.57
ATP2B1-207ENST00000550716 IARSP41252 1262 aaKnown RBP11.52□□□□□ -0.57
ATP2B1-207ENST00000550716 EAPPQ56P03 285 aaPredicted RBP11.52□□□□□ -0.57
ATP2B1-207ENST00000550716 SUSD4Q5VX71 490 aa11.52□□□□□ -0.57
ATP2B1-207ENST00000550716 LDHDQ86WU2 507 aa11.52□□□□□ -0.57
ATP2B1-207ENST00000550716 SYNE4Q8N205 404 aa11.52□□□□□ -0.57
ATP2B1-207ENST00000550716 CNTNAP1P78357 1384 aa11.52□□□□□ -0.57
ATP2B1-207ENST00000550716 DLG5Q8TDM6 1919 aa11.51□□□□□ -0.57
ATP2B1-207ENST00000550716 IQCA1LA6NCM1 817 aa11.51□□□□□ -0.57
ATP2B1-207ENST00000550716 FZD9O00144 591 aa11.51□□□□□ -0.57
ATP2B1-207ENST00000550716 ZMYND10O75800 440 aa11.51□□□□□ -0.57
ATP2B1-207ENST00000550716 NTSR2O95665 410 aa11.51□□□□□ -0.57
ATP2B1-207ENST00000550716 ANXA1P04083 346 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms