RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 ITPRIPQ8IWB1 547 aa17.23■□□□□ 0.35
TROAP-213ENST00000550709 NIM1KQ8IY84 436 aa17.23■□□□□ 0.35
TROAP-213ENST00000550709 CHD4Q14839 1912 aa17.23■□□□□ 0.35
TROAP-213ENST00000550709 ZC3H4Q9UPT8 1303 aaKnown RBP17.22■□□□□ 0.35
TROAP-213ENST00000550709 GNAI3P08754 354 aa17.22■□□□□ 0.35
TROAP-213ENST00000550709 KIAA2012Q0VF49 1180 aa17.22■□□□□ 0.35
TROAP-213ENST00000550709 WASHC4Q2M389 1173 aa17.22■□□□□ 0.35
TROAP-213ENST00000550709 DPY19L2Q6NUT2 758 aa17.22■□□□□ 0.35
TROAP-213ENST00000550709 LDHAL6AQ6ZMR3 332 aa17.22■□□□□ 0.35
TROAP-213ENST00000550709 HELBQ8NG08 1087 aaPredicted RBP17.22■□□□□ 0.35
TROAP-213ENST00000550709 NMRK2Q9NPI5 230 aa17.22■□□□□ 0.35
TROAP-213ENST00000550709 CNNM1Q9NRU3 951 aa17.22■□□□□ 0.35
TROAP-213ENST00000550709 PODXL2Q9NZ53 605 aa17.22■□□□□ 0.35
TROAP-213ENST00000550709 XDHP47989 1333 aa17.21■□□□□ 0.35
TROAP-213ENST00000550709 KDM2BQ8NHM5 1336 aa17.21■□□□□ 0.35
TROAP-213ENST00000550709 ZNF541Q9H0D2 1346 aa17.21■□□□□ 0.35
TROAP-213ENST00000550709 TAF1P21675 1872 aa17.21■□□□□ 0.35
TROAP-213ENST00000550709 GLTPD2A6NH11 291 aa17.21■□□□□ 0.35
TROAP-213ENST00000550709 DDNO94850 711 aaPredicted RBP17.21■□□□□ 0.35
TROAP-213ENST00000550709 CHRNDQ07001 517 aa17.21■□□□□ 0.35
TROAP-213ENST00000550709 EYA3Q99504 573 aa17.21■□□□□ 0.35
TROAP-213ENST00000550709 HDAC5Q9UQL6 1122 aa17.21■□□□□ 0.35
TROAP-213ENST00000550709 FZD9O00144 591 aa17.2■□□□□ 0.34
TROAP-213ENST00000550709 ATP2B4P23634 1241 aa17.2■□□□□ 0.34
TROAP-213ENST00000550709 EIF6P56537 245 aaKnown RBP17.2■□□□□ 0.34
TROAP-213ENST00000550709 DOK7Q18PE1 504 aa17.2■□□□□ 0.34
TROAP-213ENST00000550709 KLHDC4Q8TBB5 520 aa17.2■□□□□ 0.34
TROAP-213ENST00000550709 PUS3Q9BZE2 481 aaKnown RBP17.2■□□□□ 0.34
TROAP-213ENST00000550709 ZC3H12CQ9C0D7 883 aaKnown RBP17.2■□□□□ 0.34
TROAP-213ENST00000550709 VPS33BQ9H267 617 aa17.2■□□□□ 0.34
TROAP-213ENST00000550709 RRAGCQ9HB90 399 aa17.2■□□□□ 0.34
TROAP-213ENST00000550709 FER1L6Q2WGJ9 1857 aa17.2■□□□□ 0.34
TROAP-213ENST00000550709 TAF5LO75529 589 aa17.19■□□□□ 0.34
TROAP-213ENST00000550709 KCNJ4P48050 445 aa17.19■□□□□ 0.34
TROAP-213ENST00000550709 ANKRD2Q9GZV1 360 aa17.19■□□□□ 0.34
TROAP-213ENST00000550709 DBNDD1Q9H9R9 158 aa17.19■□□□□ 0.34
TROAP-213ENST00000550709 GJA3Q9Y6H8 435 aa17.19■□□□□ 0.34
TROAP-213ENST00000550709 G3V3G9 751 aa17.18■□□□□ 0.34
TROAP-213ENST00000550709 SNAP23O00161 211 aa17.18■□□□□ 0.34
TROAP-213ENST00000550709 GNAI2P04899 355 aa17.18■□□□□ 0.34
TROAP-213ENST00000550709 DCAF8Q5TAQ9 597 aa17.18■□□□□ 0.34
TROAP-213ENST00000550709 ZNRF3Q9ULT6 936 aa17.18■□□□□ 0.34
TROAP-213ENST00000550709 COL4A5P29400 1685 aa17.17■□□□□ 0.34
TROAP-213ENST00000550709 RAD17O75943 681 aa17.17■□□□□ 0.34
TROAP-213ENST00000550709 MS4A1P11836 297 aa17.17■□□□□ 0.34
TROAP-213ENST00000550709 LRRC24Q50LG9 513 aa17.17■□□□□ 0.34
TROAP-213ENST00000550709 C1orf115Q9H7X2 142 aa17.17■□□□□ 0.34
TROAP-213ENST00000550709 ECE2O60344 883 aa17.16■□□□□ 0.34
TROAP-213ENST00000550709 RFX5P48382 616 aaPredicted RBP17.16■□□□□ 0.34
TROAP-213ENST00000550709 C20orf194Q5TEA3 1177 aa17.16■□□□□ 0.34
TROAP-213ENST00000550709 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.16■□□□□ 0.34
TROAP-213ENST00000550709 SIL1Q9H173 461 aa17.16■□□□□ 0.34
TROAP-213ENST00000550709 LEMD3Q9Y2U8 911 aa17.16■□□□□ 0.34
TROAP-213ENST00000550709 COG6Q9Y2V7 657 aa17.16■□□□□ 0.34
TROAP-213ENST00000550709 ZNF804BA4D1E1 1349 aa17.16■□□□□ 0.34
TROAP-213ENST00000550709 DUOX1Q9NRD9 1551 aa17.15■□□□□ 0.34
TROAP-213ENST00000550709 YDJCA8MPS7 323 aa17.15■□□□□ 0.34
TROAP-213ENST00000550709 KIF3CO14782 793 aa17.15■□□□□ 0.34
TROAP-213ENST00000550709 ZBTB7BO15156 539 aaPredicted RBP17.15■□□□□ 0.34
TROAP-213ENST00000550709 KLRK1P26718 216 aa17.15■□□□□ 0.34
TROAP-213ENST00000550709 PTPN12Q05209 780 aaKnown RBP17.15■□□□□ 0.34
TROAP-213ENST00000550709 CXCL9Q07325 125 aa17.15■□□□□ 0.34
TROAP-213ENST00000550709 METTL24Q5JXM2 366 aa17.15■□□□□ 0.34
TROAP-213ENST00000550709 KCNQ5Q9NR82 932 aa17.15■□□□□ 0.34
TROAP-213ENST00000550709 PA2G4Q9UQ80 394 aaKnown RBP17.15■□□□□ 0.34
TROAP-213ENST00000550709 RIPOR2Q9Y4F9 1068 aa17.15■□□□□ 0.34
TROAP-213ENST00000550709 SBF1O95248 1867 aa17.15■□□□□ 0.34
TROAP-213ENST00000550709 SRGAP3O43295 1099 aa17.14■□□□□ 0.33
TROAP-213ENST00000550709 VEGFAP15692 232 aaPredicted RBP17.14■□□□□ 0.33
TROAP-213ENST00000550709 CIAPIN1Q6FI81 312 aa17.14■□□□□ 0.33
TROAP-213ENST00000550709 TXNRD3Q86VQ6 643 aa17.14■□□□□ 0.33
TROAP-213ENST00000550709 GPC2Q8N158 579 aa17.14■□□□□ 0.33
TROAP-213ENST00000550709 MROH5Q6ZUA9 1318 aa17.13■□□□□ 0.33
TROAP-213ENST00000550709 POTECB2RU33 542 aa17.12■□□□□ 0.33
TROAP-213ENST00000550709 EYA2O00167 538 aa17.12■□□□□ 0.33
TROAP-213ENST00000550709 MVPQ14764 893 aaKnown RBP17.12■□□□□ 0.33
TROAP-213ENST00000550709 TNIP1Q15025 636 aa17.12■□□□□ 0.33
TROAP-213ENST00000550709 C16orf71Q8IYS4 520 aaPredicted RBP17.12■□□□□ 0.33
TROAP-213ENST00000550709 LRRC37AA6NMS7 1700 aa17.12■□□□□ 0.33
TROAP-213ENST00000550709 PNMA6EA0A0J9YXQ4 647 aa17.11■□□□□ 0.33
TROAP-213ENST00000550709 PSMD14O00487 310 aa17.11■□□□□ 0.33
TROAP-213ENST00000550709 L3MBTL3Q96JM7 780 aaPredicted RBP17.11■□□□□ 0.33
TROAP-213ENST00000550709 MYH3P11055 1940 aa17.11■□□□□ 0.33
TROAP-213ENST00000550709 MED23Q9ULK4 1368 aa17.11■□□□□ 0.33
TROAP-213ENST00000550709 GMPSP49915 693 aaPredicted RBP17.1■□□□□ 0.33
TROAP-213ENST00000550709 MTX1Q13505 466 aa17.1■□□□□ 0.33
TROAP-213ENST00000550709 PDE3AQ14432 1141 aa17.1■□□□□ 0.33
TROAP-213ENST00000550709 ATG9AQ7Z3C6 839 aa17.1■□□□□ 0.33
TROAP-213ENST00000550709 FBXW7Q969H0 707 aa17.1■□□□□ 0.33
TROAP-213ENST00000550709 DDX19BQ9UMR2 479 aa17.1■□□□□ 0.33
TROAP-213ENST00000550709 ZBTB12Q9Y330 459 aaPredicted RBP17.1■□□□□ 0.33
TROAP-213ENST00000550709 IQCA1LA6NCM1 817 aa17.09■□□□□ 0.33
TROAP-213ENST00000550709 LMOD1P29536 600 aaPredicted RBP17.09■□□□□ 0.33
TROAP-213ENST00000550709 UBE4AQ14139 1066 aa17.09■□□□□ 0.33
TROAP-213ENST00000550709 COA1Q9GZY4 146 aa17.09■□□□□ 0.33
TROAP-213ENST00000550709 COPRSQ9NQ92 184 aa17.09■□□□□ 0.33
TROAP-213ENST00000550709 HACL1Q9UJ83 578 aa17.09■□□□□ 0.33
TROAP-213ENST00000550709 CCDC88AQ3V6T2 1871 aa17.08■□□□□ 0.33
TROAP-213ENST00000550709 TIAM2Q8IVF5 1701 aa17.08■□□□□ 0.32
TROAP-213ENST00000550709 CIAO1O76071 339 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms