RNA–Protein interactions for RNA: ENST00000550636.1

LINC02396-202, Transcript of long intergenic non-protein coding RNA 2396, humanhuman

TSL 2 BASIC

Gene LINC02396, Length 2,324 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02396-202ENST00000550636 ATRNO75882 1429 aa17.51■□□□□ 0.39
LINC02396-202ENST00000550636 ZNF589Q86UQ0 364 aaPredicted RBP17.51■□□□□ 0.39
LINC02396-202ENST00000550636 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.51■□□□□ 0.39
LINC02396-202ENST00000550636 CHGBP05060 677 aa17.5■□□□□ 0.39
LINC02396-202ENST00000550636 FKBP4Q02790 459 aaKnown RBP eCLIP17.5■□□□□ 0.39
LINC02396-202ENST00000550636 CCDC152Q4G0S7 254 aa17.5■□□□□ 0.39
LINC02396-202ENST00000550636 TMX3Q96JJ7 454 aa17.5■□□□□ 0.39
LINC02396-202ENST00000550636 GNPATO15228 680 aa17.5■□□□□ 0.39
LINC02396-202ENST00000550636 PDE8BO95263 885 aa17.5■□□□□ 0.39
LINC02396-202ENST00000550636 ZKSCAN1P17029 563 aaPredicted RBP17.5■□□□□ 0.39
LINC02396-202ENST00000550636 NOL8Q76FK4 1167 aaKnown RBP17.5■□□□□ 0.39
LINC02396-202ENST00000550636 RFX7Q2KHR2 1363 aa17.5■□□□□ 0.39
LINC02396-202ENST00000550636 MCMDC2Q4G0Z9 681 aa17.49■□□□□ 0.39
LINC02396-202ENST00000550636 BICDL1Q6ZP65 573 aa17.49■□□□□ 0.39
LINC02396-202ENST00000550636 SEC31BQ9NQW1 1179 aa17.49■□□□□ 0.39
LINC02396-202ENST00000550636 MED23Q9ULK4 1368 aa17.49■□□□□ 0.39
LINC02396-202ENST00000550636 TAF5LO75529 589 aa17.49■□□□□ 0.39
LINC02396-202ENST00000550636 CREB3L3Q68CJ9 461 aa17.49■□□□□ 0.39
LINC02396-202ENST00000550636 KCNB2Q92953 911 aa17.49■□□□□ 0.39
LINC02396-202ENST00000550636 SEC62Q99442 399 aaKnown RBP17.49■□□□□ 0.39
LINC02396-202ENST00000550636 MPHOSPH8Q99549 860 aa17.49■□□□□ 0.39
LINC02396-202ENST00000550636 RTCBQ9Y3I0 505 aaKnown RBP17.49■□□□□ 0.39
LINC02396-202ENST00000550636 USPL1Q5W0Q7 1092 aa17.48■□□□□ 0.39
LINC02396-202ENST00000550636 VGLL2Q8N8G2 317 aa17.48■□□□□ 0.39
LINC02396-202ENST00000550636 NARFQ9UHQ1 456 aa17.48■□□□□ 0.39
LINC02396-202ENST00000550636 RIC1Q4ADV7 1423 aa17.48■□□□□ 0.39
LINC02396-202ENST00000550636 ZNF831Q5JPB2 1677 aa17.48■□□□□ 0.39
LINC02396-202ENST00000550636 COL5A3P25940 1745 aaPredicted RBP17.48■□□□□ 0.39
LINC02396-202ENST00000550636 MROH5Q6ZUA9 1318 aa17.48■□□□□ 0.39
LINC02396-202ENST00000550636 ZPR1O75312 459 aa17.48■□□□□ 0.39
LINC02396-202ENST00000550636 CASTP20810 708 aaKnown RBP17.48■□□□□ 0.39
LINC02396-202ENST00000550636 RAB3GAP1Q15042 981 aa17.48■□□□□ 0.39
LINC02396-202ENST00000550636 GLIPR1L2Q4G1C9 344 aa17.48■□□□□ 0.39
LINC02396-202ENST00000550636 TICAM2Q86XR7 235 aa17.48■□□□□ 0.39
LINC02396-202ENST00000550636 HELBQ8NG08 1087 aaPredicted RBP17.48■□□□□ 0.39
LINC02396-202ENST00000550636 CWC22Q9HCG8 908 aaKnown RBP17.48■□□□□ 0.39
LINC02396-202ENST00000550636 RNF20Q5VTR2 975 aa17.47■□□□□ 0.39
LINC02396-202ENST00000550636 TBC1D9BQ66K14 1250 aa17.47■□□□□ 0.39
LINC02396-202ENST00000550636 CCDC129Q6ZRS4 1044 aa17.47■□□□□ 0.39
LINC02396-202ENST00000550636 ZGPATQ8N5A5 531 aaKnown RBP17.47■□□□□ 0.39
LINC02396-202ENST00000550636 JAKMIP1Q96N16 626 aaKnown RBP17.47■□□□□ 0.39
LINC02396-202ENST00000550636 BCL2L12Q9HB09 334 aa17.47■□□□□ 0.39
LINC02396-202ENST00000550636 SLC27A2O14975 620 aa17.47■□□□□ 0.39
LINC02396-202ENST00000550636 RGL2O15211 777 aa17.47■□□□□ 0.39
LINC02396-202ENST00000550636 GTF2E1P29083 439 aaPredicted RBP17.47■□□□□ 0.39
LINC02396-202ENST00000550636 ADCK5Q3MIX3 580 aa17.47■□□□□ 0.39
LINC02396-202ENST00000550636 ERFEQ4G0M1 354 aa17.47■□□□□ 0.39
LINC02396-202ENST00000550636 TNPO1Q92973 898 aaKnown RBP17.47■□□□□ 0.39
LINC02396-202ENST00000550636 BCL11BQ9C0K0 894 aaPredicted RBP17.47■□□□□ 0.39
LINC02396-202ENST00000550636 SRP68Q9UHB9 627 aaKnown RBP17.47■□□□□ 0.39
LINC02396-202ENST00000550636 BTAF1O14981 1849 aa17.46■□□□□ 0.39
LINC02396-202ENST00000550636 MCM4P33991 863 aa17.46■□□□□ 0.39
LINC02396-202ENST00000550636 IGHMBP2P38935 993 aaKnown RBP17.46■□□□□ 0.39
LINC02396-202ENST00000550636 SCARF1Q14162 830 aa17.46■□□□□ 0.39
LINC02396-202ENST00000550636 SLFNL1Q499Z3 407 aa17.46■□□□□ 0.39
LINC02396-202ENST00000550636 HELLSQ9NRZ9 838 aa17.46■□□□□ 0.39
LINC02396-202ENST00000550636 MYH3P11055 1940 aa17.46■□□□□ 0.39
LINC02396-202ENST00000550636 RNF113AO15541 343 aaKnown RBP17.46■□□□□ 0.38
LINC02396-202ENST00000550636 TTC14Q96N46 770 aa17.46■□□□□ 0.38
LINC02396-202ENST00000550636 TM6SF1Q9BZW5 370 aa17.46■□□□□ 0.38
LINC02396-202ENST00000550636 CPA1P15085 419 aa17.45■□□□□ 0.38
LINC02396-202ENST00000550636 SSFA2P28290 1259 aa17.45■□□□□ 0.38
LINC02396-202ENST00000550636 ZAP70P43403 619 aa17.45■□□□□ 0.38
LINC02396-202ENST00000550636 PUM3Q15397 648 aaKnown RBP17.45■□□□□ 0.38
LINC02396-202ENST00000550636 LPIN2Q92539 896 aa17.45■□□□□ 0.38
LINC02396-202ENST00000550636 ARHGEF1Q92888 912 aaKnown RBP17.45■□□□□ 0.38
LINC02396-202ENST00000550636 SETDB2Q96T68 719 aa17.45■□□□□ 0.38
LINC02396-202ENST00000550636 ZSWIM6Q9HCJ5 1215 aa17.45■□□□□ 0.38
LINC02396-202ENST00000550636 NHSQ6T4R5 1651 aa17.45■□□□□ 0.38
LINC02396-202ENST00000550636 AK2P54819 239 aa17.44■□□□□ 0.38
LINC02396-202ENST00000550636 CUL4AQ13619 759 aa17.44■□□□□ 0.38
LINC02396-202ENST00000550636 LRRFIP1Q32MZ4 808 aaKnown RBP17.44■□□□□ 0.38
LINC02396-202ENST00000550636 ZMYM1Q5SVZ6 1142 aa17.44■□□□□ 0.38
LINC02396-202ENST00000550636 CYP46A1Q9Y6A2 500 aa17.44■□□□□ 0.38
LINC02396-202ENST00000550636 PSMA5P28066 241 aa17.43■□□□□ 0.38
LINC02396-202ENST00000550636 NUCB2P80303 420 aa17.43■□□□□ 0.38
LINC02396-202ENST00000550636 PI16Q6UXB8 463 aa17.43■□□□□ 0.38
LINC02396-202ENST00000550636 AMIGO3Q86WK7 504 aa17.43■□□□□ 0.38
LINC02396-202ENST00000550636 ZNF512BQ96KM6 892 aaPredicted RBP17.43■□□□□ 0.38
LINC02396-202ENST00000550636 PDRG1Q9NUG6 133 aa17.43■□□□□ 0.38
LINC02396-202ENST00000550636 RTL9Q8NET4 1388 aa17.43■□□□□ 0.38
LINC02396-202ENST00000550636 FGFR2P21802 821 aa17.43■□□□□ 0.38
LINC02396-202ENST00000550636 MCAMP43121 646 aa17.43■□□□□ 0.38
LINC02396-202ENST00000550636 CCDC102BQ68D86 513 aa17.43■□□□□ 0.38
LINC02396-202ENST00000550636 RUFY3Q7L099 469 aa17.43■□□□□ 0.38
LINC02396-202ENST00000550636 HMG20BQ9P0W2 317 aa17.43■□□□□ 0.38
LINC02396-202ENST00000550636 U3KPZ7 1027 aaPredicted RBP17.43■□□□□ 0.38
LINC02396-202ENST00000550636 RFC4P35249 363 aa17.42■□□□□ 0.38
LINC02396-202ENST00000550636 SF3B3Q15393 1217 aaKnown RBP17.42■□□□□ 0.38
LINC02396-202ENST00000550636 TRAPPC3LQ5T215 181 aa17.42■□□□□ 0.38
LINC02396-202ENST00000550636 VPS53Q5VIR6 699 aa17.42■□□□□ 0.38
LINC02396-202ENST00000550636 FAM196AQ6ZSG2 479 aa17.42■□□□□ 0.38
LINC02396-202ENST00000550636 INTS4Q96HW7 963 aaKnown RBP17.42■□□□□ 0.38
LINC02396-202ENST00000550636 CDC5LQ99459 802 aaKnown RBP17.42■□□□□ 0.38
LINC02396-202ENST00000550636 LARP6Q9BRS8 491 aaKnown RBP17.42■□□□□ 0.38
LINC02396-202ENST00000550636 NYXQ9GZU5 481 aa17.42■□□□□ 0.38
LINC02396-202ENST00000550636 LIMCH1Q9UPQ0 1083 aa17.42■□□□□ 0.38
LINC02396-202ENST00000550636 ABCC12Q96J65 1359 aa17.42■□□□□ 0.38
LINC02396-202ENST00000550636 SNAP23O00161 211 aa17.42■□□□□ 0.38
LINC02396-202ENST00000550636 PHF14O94880 888 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms