RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 MAGEB6P1A0A0J9YX57 407 aa14.2□□□□□ -0.14
NR4A1-215ENST00000550557 HSPA1LP34931 641 aa14.2□□□□□ -0.14
NR4A1-215ENST00000550557 SYCP1Q15431 976 aa14.2□□□□□ -0.14
NR4A1-215ENST00000550557 CCDC178Q5BJE1 867 aa14.2□□□□□ -0.14
NR4A1-215ENST00000550557 TTC22Q5TAA0 569 aa14.2□□□□□ -0.14
NR4A1-215ENST00000550557 DENND2AQ9ULE3 1009 aa14.2□□□□□ -0.14
NR4A1-215ENST00000550557 SPATA31A3Q5VYP0 1347 aa14.2□□□□□ -0.14
NR4A1-215ENST00000550557 NAP1L1P55209 391 aaKnown RBP14.2□□□□□ -0.14
NR4A1-215ENST00000550557 HOOK2Q96ED9 719 aa14.2□□□□□ -0.14
NR4A1-215ENST00000550557 MCM9Q9NXL9 1143 aa14.2□□□□□ -0.14
NR4A1-215ENST00000550557 THRAP3Q9Y2W1 955 aaKnown RBP14.2□□□□□ -0.14
NR4A1-215ENST00000550557 NLRP5P59047 1200 aa14.2□□□□□ -0.14
NR4A1-215ENST00000550557 ATP8B2P98198 1209 aa14.2□□□□□ -0.14
NR4A1-215ENST00000550557 PICK1Q9NRD5 415 aa14.2□□□□□ -0.14
NR4A1-215ENST00000550557 UPF3BQ9BZI7 483 aaKnown RBP14.19□□□□□ -0.14
NR4A1-215ENST00000550557 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.19□□□□□ -0.14
NR4A1-215ENST00000550557 MAST3O60307 1309 aa14.19□□□□□ -0.14
NR4A1-215ENST00000550557 B4DLN1 442 aa14.19□□□□□ -0.14
NR4A1-215ENST00000550557 MRPL12P52815 198 aaKnown RBP14.19□□□□□ -0.14
NR4A1-215ENST00000550557 HOMER1Q86YM7 354 aa14.19□□□□□ -0.14
NR4A1-215ENST00000550557 PLEKHF1Q96S99 279 aa14.19□□□□□ -0.14
NR4A1-215ENST00000550557 RAB34Q9BZG1 259 aa14.19□□□□□ -0.14
NR4A1-215ENST00000550557 JCADQ9P266 1359 aa14.19□□□□□ -0.14
NR4A1-215ENST00000550557 CEP152O94986 1710 aa14.19□□□□□ -0.14
NR4A1-215ENST00000550557 TTC6Q86TZ1 520 aa14.19□□□□□ -0.14
NR4A1-215ENST00000550557 ESR2Q92731 530 aa14.19□□□□□ -0.14
NR4A1-215ENST00000550557 ZBTB7BO15156 539 aaPredicted RBP14.18□□□□□ -0.14
NR4A1-215ENST00000550557 SEC24BO95487 1268 aa14.18□□□□□ -0.14
NR4A1-215ENST00000550557 USPL1Q5W0Q7 1092 aa14.18□□□□□ -0.14
NR4A1-215ENST00000550557 TSPY26PQ9H489 355 aa14.18□□□□□ -0.14
NR4A1-215ENST00000550557 SETBP1Q9Y6X0 1596 aa14.18□□□□□ -0.14
NR4A1-215ENST00000550557 SPDYE4A6NLX3 237 aa14.18□□□□□ -0.14
NR4A1-215ENST00000550557 TRMT1LQ7Z2T5 733 aaKnown RBP14.18□□□□□ -0.14
NR4A1-215ENST00000550557 NCOA7Q8NI08 942 aa14.18□□□□□ -0.14
NR4A1-215ENST00000550557 CEP131Q9UPN4 1083 aa14.18□□□□□ -0.14
NR4A1-215ENST00000550557 RIMBP3CA6NJZ7 1639 aa14.18□□□□□ -0.14
NR4A1-215ENST00000550557 RIMBP3BA6NNM3 1639 aa14.18□□□□□ -0.14
NR4A1-215ENST00000550557 RIMBP3Q9UFD9 1639 aa14.18□□□□□ -0.14
NR4A1-215ENST00000550557 ATP7BP35670 1465 aa14.18□□□□□ -0.14
NR4A1-215ENST00000550557 TCIRG1Q13488 830 aa14.18□□□□□ -0.14
NR4A1-215ENST00000550557 PRKG1Q13976 671 aa14.18□□□□□ -0.14
NR4A1-215ENST00000550557 RPS8P62241 208 aaKnown RBP14.17□□□□□ -0.14
NR4A1-215ENST00000550557 KRT85P78386 507 aa14.17□□□□□ -0.14
NR4A1-215ENST00000550557 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.17□□□□□ -0.149e-12■■■■■ 149.1
NR4A1-215ENST00000550557 TSHZ3Q63HK5 1081 aa14.17□□□□□ -0.14
NR4A1-215ENST00000550557 TEX11Q8IYF3 940 aa14.17□□□□□ -0.14
NR4A1-215ENST00000550557 MIGA1Q8NAN2 632 aa14.17□□□□□ -0.14
NR4A1-215ENST00000550557 DCTPP1Q9H773 170 aa14.17□□□□□ -0.14
NR4A1-215ENST00000550557 WDR33Q9C0J8 1336 aaKnown RBP14.17□□□□□ -0.14
NR4A1-215ENST00000550557 TMEM266Q2M3C6 531 aa14.17□□□□□ -0.14
NR4A1-215ENST00000550557 MAP7D2Q96T17 732 aa14.17□□□□□ -0.14
NR4A1-215ENST00000550557 BICC1Q9H694 974 aaKnown RBP14.17□□□□□ -0.14
NR4A1-215ENST00000550557 ASAP1Q9ULH1 1129 aa14.17□□□□□ -0.14
NR4A1-215ENST00000550557 TRIM21P19474 475 aaKnown RBP14.16□□□□□ -0.14
NR4A1-215ENST00000550557 SSRP1Q08945 709 aaKnown RBP14.16□□□□□ -0.14
NR4A1-215ENST00000550557 DLGAP5Q15398 846 aa14.16□□□□□ -0.14
NR4A1-215ENST00000550557 SAMM50Q9Y512 469 aa14.16□□□□□ -0.14
NR4A1-215ENST00000550557 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.16□□□□□ -0.14
NR4A1-215ENST00000550557 EYA2O00167 538 aa14.16□□□□□ -0.14
NR4A1-215ENST00000550557 BAG4O95429 457 aaKnown RBP14.16□□□□□ -0.14
NR4A1-215ENST00000550557 FILIP1LQ4L180 1135 aa14.16□□□□□ -0.14
NR4A1-215ENST00000550557 MICU3Q86XE3 530 aa14.16□□□□□ -0.14
NR4A1-215ENST00000550557 KRT23Q9C075 422 aa14.16□□□□□ -0.14
NR4A1-215ENST00000550557 CRKLP46109 303 aaKnown RBP14.16□□□□□ -0.14
NR4A1-215ENST00000550557 GLI2P10070 1586 aa14.16□□□□□ -0.14
NR4A1-215ENST00000550557 TFCP2Q12800 502 aa14.16□□□□□ -0.14
NR4A1-215ENST00000550557 PUM3Q15397 648 aaKnown RBP14.16□□□□□ -0.14
NR4A1-215ENST00000550557 MAGEB6Q8N7X4 407 aa14.16□□□□□ -0.14
NR4A1-215ENST00000550557 WDR66Q8TBY9 1149 aa14.16□□□□□ -0.14
NR4A1-215ENST00000550557 SH2D4AQ9H788 454 aa14.16□□□□□ -0.14
NR4A1-215ENST00000550557 PAG1Q9NWQ8 432 aa14.16□□□□□ -0.14
NR4A1-215ENST00000550557 MTERF4Q7Z6M4 381 aaKnown RBP14.15□□□□□ -0.14
NR4A1-215ENST00000550557 ADGRL3Q9HAR2 1447 aa14.15□□□□□ -0.14
NR4A1-215ENST00000550557 FAM135BQ49AJ0 1406 aa14.15□□□□□ -0.14
NR4A1-215ENST00000550557 PPRC1Q5VV67 1664 aaKnown RBP14.15□□□□□ -0.14
NR4A1-215ENST00000550557 C8orf76Q96K31 380 aa14.15□□□□□ -0.14
NR4A1-215ENST00000550557 CFAP45Q9UL16 551 aa14.15□□□□□ -0.14
NR4A1-215ENST00000550557 ERBB3P21860 1342 aa14.15□□□□□ -0.14
NR4A1-215ENST00000550557 LETM1O95202 739 aaPredicted RBP14.15□□□□□ -0.14
NR4A1-215ENST00000550557 GNAT2P19087 354 aa14.15□□□□□ -0.14
NR4A1-215ENST00000550557 WTAPQ15007 396 aa14.15□□□□□ -0.14
NR4A1-215ENST00000550557 CCDC70Q6NSX1 233 aa14.15□□□□□ -0.14
NR4A1-215ENST00000550557 CCAR2Q8N163 923 aaKnown RBP14.15□□□□□ -0.14
NR4A1-215ENST00000550557 TANGO6Q9C0B7 1094 aa14.15□□□□□ -0.14
NR4A1-215ENST00000550557 RRP9O43818 475 aaKnown RBP14.15□□□□□ -0.15
NR4A1-215ENST00000550557 KCNQ4P56696 695 aa14.15□□□□□ -0.15
NR4A1-215ENST00000550557 TMOD4Q9NZQ9 345 aa14.15□□□□□ -0.15
NR4A1-215ENST00000550557 AATKQ6ZMQ8 1374 aa14.14□□□□□ -0.15
NR4A1-215ENST00000550557 CHL1O00533 1208 aa14.14□□□□□ -0.15
NR4A1-215ENST00000550557 SSFA2P28290 1259 aa14.14□□□□□ -0.15
NR4A1-215ENST00000550557 EIF4A1P60842 406 aaKnown RBP14.14□□□□□ -0.15
NR4A1-215ENST00000550557 ZSCAN30Q86W11 494 aa14.14□□□□□ -0.15
NR4A1-215ENST00000550557 GJD4Q96KN9 370 aaPredicted RBP14.14□□□□□ -0.15
NR4A1-215ENST00000550557 CNNM2Q9H8M5 875 aa14.14□□□□□ -0.15
NR4A1-215ENST00000550557 IARSP41252 1262 aaKnown RBP14.14□□□□□ -0.15
NR4A1-215ENST00000550557 CCDC144CPQ8IYA2 1237 aa14.14□□□□□ -0.15
NR4A1-215ENST00000550557 ZNF526Q8TF50 670 aaPredicted RBP14.14□□□□□ -0.15
NR4A1-215ENST00000550557 USP16Q9Y5T5 823 aa14.14□□□□□ -0.15
NR4A1-215ENST00000550557 XRCC6P12956 609 aaKnown RBP eCLIP14.14□□□□□ -0.15
NR4A1-215ENST00000550557 BRPF1P55201 1214 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms