RNA–Protein interactions for RNA: ENST00000550543.1

TPCN1-213, Transcript of two pore segment channel 1, humanhuman

TSL 5

Gene TPCN1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-213ENST00000550543 APAF1O14727 1248 aa18.32■□□□□ 0.52
TPCN1-213ENST00000550543 RIMBP2O15034 1052 aa18.32■□□□□ 0.52
TPCN1-213ENST00000550543 HIRAP54198 1017 aaPredicted RBP18.32■□□□□ 0.52
TPCN1-213ENST00000550543 NEXNQ0ZGT2 675 aa18.32■□□□□ 0.52
TPCN1-213ENST00000550543 CCDC102AQ96A19 550 aa18.32■□□□□ 0.52
TPCN1-213ENST00000550543 ABHD8Q96I13 439 aa18.32■□□□□ 0.52
TPCN1-213ENST00000550543 CDC5LQ99459 802 aaKnown RBP18.32■□□□□ 0.52
TPCN1-213ENST00000550543 DUOX1Q9NRD9 1551 aa18.32■□□□□ 0.52
TPCN1-213ENST00000550543 UFL1O94874 794 aa18.31■□□□□ 0.52
TPCN1-213ENST00000550543 HUNKP57058 714 aa18.31■□□□□ 0.52
TPCN1-213ENST00000550543 FMR1Q06787 632 aaKnown RBP eCLIP18.31■□□□□ 0.52
TPCN1-213ENST00000550543 RTL5Q5HYW3 569 aaPredicted RBP18.31■□□□□ 0.52
TPCN1-213ENST00000550543 USP48Q86UV5 1035 aa18.31■□□□□ 0.52
TPCN1-213ENST00000550543 ANKRD18AQ8IVF6 992 aa18.31■□□□□ 0.52
TPCN1-213ENST00000550543 SULF1Q8IWU6 871 aa18.31■□□□□ 0.52
TPCN1-213ENST00000550543 AGBL3Q8NEM8 1001 aa18.31■□□□□ 0.52
TPCN1-213ENST00000550543 MYD88Q99836 296 aa18.31■□□□□ 0.52
TPCN1-213ENST00000550543 METTL22Q9BUU2 404 aaPredicted RBP18.31■□□□□ 0.52
TPCN1-213ENST00000550543 STK31Q9BXU1 1019 aa18.31■□□□□ 0.52
TPCN1-213ENST00000550543 XDHP47989 1333 aa18.3■□□□□ 0.52
TPCN1-213ENST00000550543 VIL1P09327 827 aaKnown RBP18.3■□□□□ 0.52
TPCN1-213ENST00000550543 ZBTB12Q9Y330 459 aaPredicted RBP18.3■□□□□ 0.52
TPCN1-213ENST00000550543 ZNF609O15014 1411 aa18.3■□□□□ 0.52
TPCN1-213ENST00000550543 DDX60Q8IY21 1712 aaKnown RBP18.29■□□□□ 0.52
TPCN1-213ENST00000550543 ATP2B4P23634 1241 aa18.29■□□□□ 0.52
TPCN1-213ENST00000550543 MMP14P50281 582 aa18.29■□□□□ 0.52
TPCN1-213ENST00000550543 KIF4BQ2VIQ3 1234 aa18.29■□□□□ 0.52
TPCN1-213ENST00000550543 TBC1D10BQ4KMP7 808 aaPredicted RBP18.29■□□□□ 0.52
TPCN1-213ENST00000550543 SAMD7Q7Z3H4 446 aa18.29■□□□□ 0.52
TPCN1-213ENST00000550543 REM2Q8IYK8 340 aaPredicted RBP18.29■□□□□ 0.52
TPCN1-213ENST00000550543 GBA2Q9HCG7 927 aaPredicted RBP18.29■□□□□ 0.52
TPCN1-213ENST00000550543 AOC2O75106 756 aa18.28■□□□□ 0.52
TPCN1-213ENST00000550543 DOK7Q18PE1 504 aa18.28■□□□□ 0.52
TPCN1-213ENST00000550543 PODNQ7Z5L7 613 aa18.28■□□□□ 0.52
TPCN1-213ENST00000550543 PHAXQ9H814 394 aaKnown RBP18.28■□□□□ 0.52
TPCN1-213ENST00000550543 ELL2O00472 640 aaPredicted RBP18.27■□□□□ 0.52
TPCN1-213ENST00000550543 RGMBQ6NW40 437 aa18.27■□□□□ 0.52
TPCN1-213ENST00000550543 KSR2Q6VAB6 950 aa18.27■□□□□ 0.52
TPCN1-213ENST00000550543 SAGE1Q9NXZ1 904 aa18.27■□□□□ 0.52
TPCN1-213ENST00000550543 FKBP1BP68106 108 aa18.26■□□□□ 0.51
TPCN1-213ENST00000550543 CCDC27Q2M243 656 aa18.26■□□□□ 0.51
TPCN1-213ENST00000550543 NCBP3Q53F19 620 aaKnown RBP18.26■□□□□ 0.51
TPCN1-213ENST00000550543 RSBN1LQ6PCB5 846 aaPredicted RBP18.26■□□□□ 0.51
TPCN1-213ENST00000550543 RTL9Q8NET4 1388 aa18.26■□□□□ 0.51
TPCN1-213ENST00000550543 CTSWP56202 376 aa18.25■□□□□ 0.51
TPCN1-213ENST00000550543 ZNF280AP59817 542 aaPredicted RBP18.25■□□□□ 0.51
TPCN1-213ENST00000550543 RBM26Q5T8P6 1007 aaKnown RBP18.25■□□□□ 0.51
TPCN1-213ENST00000550543 ZNF428Q96B54 188 aa18.25■□□□□ 0.51
TPCN1-213ENST00000550543 SEC31BQ9NQW1 1179 aa18.25■□□□□ 0.51
TPCN1-213ENST00000550543 MAP3K2Q9Y2U5 619 aa18.25■□□□□ 0.51
TPCN1-213ENST00000550543 MYO3BQ8WXR4 1341 aa18.24■□□□□ 0.51
TPCN1-213ENST00000550543 PITPNM2Q9BZ72 1349 aa18.24■□□□□ 0.51
TPCN1-213ENST00000550543 USP17L3A6NCW0 530 aa18.24■□□□□ 0.51
TPCN1-213ENST00000550543 USP17L4A6NCW7 530 aa18.24■□□□□ 0.51
TPCN1-213ENST00000550543 USP17L8P0C7I0 530 aa18.24■□□□□ 0.51
TPCN1-213ENST00000550543 USP17L1Q7RTZ2 530 aa18.24■□□□□ 0.51
TPCN1-213ENST00000550543 C8orf58Q8NAV2 365 aa18.24■□□□□ 0.51
TPCN1-213ENST00000550543 BSDC1Q9NW68 430 aaPredicted RBP18.24■□□□□ 0.51
TPCN1-213ENST00000550543 GGA3Q9NZ52 723 aa18.24■□□□□ 0.51
TPCN1-213ENST00000550543 SHTN1A0MZ66 631 aa18.23■□□□□ 0.51
TPCN1-213ENST00000550543 ZNF157P51786 506 aaPredicted RBP18.23■□□□□ 0.51
TPCN1-213ENST00000550543 OGFOD1Q8N543 542 aa18.23■□□□□ 0.51
TPCN1-213ENST00000550543 IL16Q14005 1332 aa18.23■□□□□ 0.51
TPCN1-213ENST00000550543 MED23Q9ULK4 1368 aa18.22■□□□□ 0.51
TPCN1-213ENST00000550543 PI4KAP2A4QPH2 592 aa18.22■□□□□ 0.51
TPCN1-213ENST00000550543 CCDC85CA6NKD9 419 aa18.22■□□□□ 0.51
TPCN1-213ENST00000550543 PI4KAP1Q8N8J0 262 aa18.22■□□□□ 0.51
TPCN1-213ENST00000550543 MYH16Q9H6N6 1097 aa18.22■□□□□ 0.51
TPCN1-213ENST00000550543 IGHMBP2P38935 993 aaKnown RBP18.21■□□□□ 0.51
TPCN1-213ENST00000550543 ANKRD2Q9GZV1 360 aa18.21■□□□□ 0.51
TPCN1-213ENST00000550543 LEMD3Q9Y2U8 911 aa18.21■□□□□ 0.51
TPCN1-213ENST00000550543 ADM5C9JUS6 153 aa18.2■□□□□ 0.5
TPCN1-213ENST00000550543 SCARF1Q14162 830 aa18.2■□□□□ 0.5
TPCN1-213ENST00000550543 COA1Q9GZY4 146 aa18.2■□□□□ 0.5
TPCN1-213ENST00000550543 MYOZ2Q9NPC6 264 aa18.2■□□□□ 0.5
TPCN1-213ENST00000550543 KCNQ5Q9NR82 932 aa18.2■□□□□ 0.5
TPCN1-213ENST00000550543 TAF1P21675 1872 aa18.2■□□□□ 0.5
TPCN1-213ENST00000550543 EGFRP00533 1210 aa18.19■□□□□ 0.5
TPCN1-213ENST00000550543 NF2P35240 595 aa18.19■□□□□ 0.5
TPCN1-213ENST00000550543 MLLT1Q03111 559 aaPredicted RBP18.19■□□□□ 0.5
TPCN1-213ENST00000550543 TWISTNBQ3B726 338 aaPredicted RBP18.19■□□□□ 0.5
TPCN1-213ENST00000550543 ANGEL2Q5VTE6 544 aaKnown RBP18.19■□□□□ 0.5
TPCN1-213ENST00000550543 TTLL11Q8NHH1 800 aa18.19■□□□□ 0.5
TPCN1-213ENST00000550543 CDCA5Q96FF9 252 aa18.19■□□□□ 0.5
TPCN1-213ENST00000550543 CCDC85AQ96PX6 553 aaPredicted RBP18.19■□□□□ 0.5
TPCN1-213ENST00000550543 TSKSQ9UJT2 592 aa18.19■□□□□ 0.5
TPCN1-213ENST00000550543 NEURL1BA8MQ27 555 aa18.18■□□□□ 0.5
TPCN1-213ENST00000550543 FAM155AB1AL88 458 aaPredicted RBP18.18■□□□□ 0.5
TPCN1-213ENST00000550543 SLC10A3P09131 477 aa18.18■□□□□ 0.5
TPCN1-213ENST00000550543 STRIP1Q5VSL9 837 aa18.18■□□□□ 0.5
TPCN1-213ENST00000550543 GMLQ99445 158 aa18.18■□□□□ 0.5
TPCN1-213ENST00000550543 MPHOSPH8Q99549 860 aa18.18■□□□□ 0.5
TPCN1-213ENST00000550543 PLA2G12BQ9BX93 195 aa18.18■□□□□ 0.5
TPCN1-213ENST00000550543 MCOLN1Q9GZU1 580 aa18.18■□□□□ 0.5
TPCN1-213ENST00000550543 MINPP1Q9UNW1 487 aa18.18■□□□□ 0.5
TPCN1-213ENST00000550543 SLC4A2P04920 1241 aa18.17■□□□□ 0.5
TPCN1-213ENST00000550543 IGKV5-2P06315 115 aa18.17■□□□□ 0.5
TPCN1-213ENST00000550543 RGS19P49795 217 aa18.17■□□□□ 0.5
TPCN1-213ENST00000550543 CCT4P50991 539 aaKnown RBP18.17■□□□□ 0.5
TPCN1-213ENST00000550543 KIF23Q02241 960 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms