RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 SETDB1Q15047 1291 aa5.89□□□□□ -1.47
CCNT1-203ENST00000550457 AKTIPQ9H8T0 292 aa5.89□□□□□ -1.47
CCNT1-203ENST00000550457 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.89□□□□□ -1.47
CCNT1-203ENST00000550457 RNF112Q9ULX5 631 aa5.89□□□□□ -1.47
CCNT1-203ENST00000550457 TRIM33Q9UPN9 1127 aa5.89□□□□□ -1.47
CCNT1-203ENST00000550457 BTBD11A6QL63 1104 aa5.88□□□□□ -1.47
CCNT1-203ENST00000550457 TNFRSF10BO14763 440 aa5.88□□□□□ -1.47
CCNT1-203ENST00000550457 COL13A1Q5TAT6 717 aaPredicted RBP5.88□□□□□ -1.47
CCNT1-203ENST00000550457 TMEM130Q8N3G9 435 aa5.88□□□□□ -1.47
CCNT1-203ENST00000550457 STK32AQ8WU08 396 aa5.88□□□□□ -1.47
CCNT1-203ENST00000550457 ACIN1Q9UKV3 1341 aaKnown RBP5.88□□□□□ -1.47
CCNT1-203ENST00000550457 GHRHP01286 108 aa5.87□□□□□ -1.47
CCNT1-203ENST00000550457 SWI5Q1ZZU3 235 aa5.87□□□□□ -1.47
CCNT1-203ENST00000550457 C16orf46Q6P387 395 aa5.87□□□□□ -1.47
CCNT1-203ENST00000550457 ADAMTSL4Q6UY14 1074 aa5.87□□□□□ -1.47
CCNT1-203ENST00000550457 Q6ZS46 218 aa5.87□□□□□ -1.47
CCNT1-203ENST00000550457 NLRP13Q86W25 1043 aa5.87□□□□□ -1.47
CCNT1-203ENST00000550457 AGGF1Q8N302 714 aaeCLIP5.87□□□□□ -1.47
CCNT1-203ENST00000550457 KRTAP9-9Q9BYP9 154 aa5.87□□□□□ -1.47
CCNT1-203ENST00000550457 KRTAP9-4Q9BYQ2 154 aa5.87□□□□□ -1.47
CCNT1-203ENST00000550457 MRPL18Q9H0U6 180 aaKnown RBP5.87□□□□□ -1.47
CCNT1-203ENST00000550457 FSTP19883 344 aa5.86□□□□□ -1.47
CCNT1-203ENST00000550457 GALNT11Q8NCW6 608 aa5.86□□□□□ -1.47
CCNT1-203ENST00000550457 OR13H1Q8NG92 308 aa5.86□□□□□ -1.47
CCNT1-203ENST00000550457 UBAP1LF5GYI3 381 aa5.85□□□□□ -1.47
CCNT1-203ENST00000550457 TM4SF5O14894 197 aa5.85□□□□□ -1.47
CCNT1-203ENST00000550457 BRD2P25440 801 aaKnown RBP5.85□□□□□ -1.47
CCNT1-203ENST00000550457 SRPK2P78362 688 aaKnown RBP5.85□□□□□ -1.47
CCNT1-203ENST00000550457 ATP11AP98196 1134 aa5.85□□□□□ -1.47
CCNT1-203ENST00000550457 ELOAQ14241 798 aaKnown RBP5.85□□□□□ -1.47
CCNT1-203ENST00000550457 MKNK1Q9BUB5 465 aa5.85□□□□□ -1.47
CCNT1-203ENST00000550457 SRA1Q9HD15 236 aaKnown RBP5.85□□□□□ -1.47
CCNT1-203ENST00000550457 ZBTB39O15060 712 aa5.84□□□□□ -1.47
CCNT1-203ENST00000550457 WISP1O95388 367 aa5.84□□□□□ -1.47
CCNT1-203ENST00000550457 NAA30Q147X3 362 aaPredicted RBP5.84□□□□□ -1.47
CCNT1-203ENST00000550457 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.84□□□□□ -1.47
CCNT1-203ENST00000550457 MAP4K3Q8IVH8 894 aa5.84□□□□□ -1.47
CCNT1-203ENST00000550457 COL26A1Q96A83 441 aa5.84□□□□□ -1.47
CCNT1-203ENST00000550457 UBL7Q96S82 380 aaPredicted RBP5.84□□□□□ -1.47
CCNT1-203ENST00000550457 RBSNQ9H1K0 784 aa5.84□□□□□ -1.47
CCNT1-203ENST00000550457 KCNK4Q9NYG8 393 aa5.84□□□□□ -1.47
CCNT1-203ENST00000550457 CXXC1Q9P0U4 656 aaPredicted RBP5.84□□□□□ -1.47
CCNT1-203ENST00000550457 PPME1Q9Y570 386 aa5.84□□□□□ -1.47
CCNT1-203ENST00000550457 KRTAP4-8A0A0G2JLE6 195 aa5.83□□□□□ -1.48
CCNT1-203ENST00000550457 LINC01387J3KSC0 135 aa5.83□□□□□ -1.48
CCNT1-203ENST00000550457 TXNDC11Q6PKC3 985 aa5.83□□□□□ -1.48
CCNT1-203ENST00000550457 PIK3R5Q8WYR1 880 aa5.83□□□□□ -1.48
CCNT1-203ENST00000550457 LACRTQ9GZZ8 138 aa5.83□□□□□ -1.48
CCNT1-203ENST00000550457 SLAIN2Q9P270 581 aa5.83□□□□□ -1.48
CCNT1-203ENST00000550457 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.82□□□□□ -1.48
CCNT1-203ENST00000550457 CYP2E1P05181 493 aaPredicted RBP5.82□□□□□ -1.48
CCNT1-203ENST00000550457 GLB1P16278 677 aa5.82□□□□□ -1.48
CCNT1-203ENST00000550457 SSTR4P31391 388 aa5.82□□□□□ -1.48
CCNT1-203ENST00000550457 ZAP70P43403 619 aa5.82□□□□□ -1.48
CCNT1-203ENST00000550457 HYAL2Q12891 473 aa5.82□□□□□ -1.48
CCNT1-203ENST00000550457 TMEM164Q5U3C3 297 aa5.82□□□□□ -1.48
CCNT1-203ENST00000550457 GPR152Q8TDT2 470 aa5.82□□□□□ -1.48
CCNT1-203ENST00000550457 RASSF4Q9H2L5 321 aa5.82□□□□□ -1.48
CCNT1-203ENST00000550457 KIF4AO95239 1232 aa5.81□□□□□ -1.48
CCNT1-203ENST00000550457 MED26O95402 600 aa5.81□□□□□ -1.48
CCNT1-203ENST00000550457 CDC25BP30305 580 aa5.81□□□□□ -1.48
CCNT1-203ENST00000550457 CD97P48960 835 aa5.81□□□□□ -1.48
CCNT1-203ENST00000550457 CEP135Q66GS9 1140 aa5.81□□□□□ -1.48
CCNT1-203ENST00000550457 SLC51AQ86UW1 340 aa5.81□□□□□ -1.48
CCNT1-203ENST00000550457 CACTIN-AS1Q8N1I8 211 aa5.81□□□□□ -1.48
CCNT1-203ENST00000550457 ARMC10Q8N2F6 343 aa5.81□□□□□ -1.48
CCNT1-203ENST00000550457 CARD10Q9BWT7 1032 aa5.81□□□□□ -1.48
CCNT1-203ENST00000550457 MUC3BQ9H195 1237 aa5.81□□□□□ -1.48
CCNT1-203ENST00000550457 PCMTD2Q9NV79 361 aa5.81□□□□□ -1.48
CCNT1-203ENST00000550457 RAXQ9Y2V3 346 aa5.81□□□□□ -1.48
CCNT1-203ENST00000550457 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.81□□□□□ -1.48
CCNT1-203ENST00000550457 CDC27P30260 824 aa5.8□□□□□ -1.48
CCNT1-203ENST00000550457 CD68P34810 354 aaPredicted RBP5.8□□□□□ -1.48
CCNT1-203ENST00000550457 TTC39BQ5VTQ0 682 aaPredicted RBP5.8□□□□□ -1.48
CCNT1-203ENST00000550457 KIAA1211Q6ZU35 1233 aa5.8□□□□□ -1.48
CCNT1-203ENST00000550457 KRTAP19-1Q8IUB9 90 aa5.8□□□□□ -1.48
CCNT1-203ENST00000550457 DCAF11Q8TEB1 546 aa5.8□□□□□ -1.48
CCNT1-203ENST00000550457 SH2B1Q9NRF2 756 aaPredicted RBP5.8□□□□□ -1.48
CCNT1-203ENST00000550457 STIM2Q9P246 746 aa5.8□□□□□ -1.48
CCNT1-203ENST00000550457 NISCHQ9Y2I1 1504 aa5.79□□□□□ -1.48
CCNT1-203ENST00000550457 DDX3YO15523 660 aaKnown RBP5.79□□□□□ -1.48
CCNT1-203ENST00000550457 SMNDC1O75940 238 aaKnown RBP eCLIP5.79□□□□□ -1.48
CCNT1-203ENST00000550457 ATG7O95352 703 aa5.79□□□□□ -1.48
CCNT1-203ENST00000550457 EPHA1P21709 976 aa5.79□□□□□ -1.48
CCNT1-203ENST00000550457 SCNN1AP37088 669 aa5.79□□□□□ -1.48
CCNT1-203ENST00000550457 ACAD11Q709F0 780 aa5.79□□□□□ -1.48
CCNT1-203ENST00000550457 CEP120Q8N960 986 aa5.79□□□□□ -1.48
CCNT1-203ENST00000550457 FOXD4L4Q8WXT5 416 aaPredicted RBP5.79□□□□□ -1.48
CCNT1-203ENST00000550457 PBX4Q9BYU1 374 aa5.79□□□□□ -1.48
CCNT1-203ENST00000550457 ABI2Q9NYB9 513 aaPredicted RBP5.79□□□□□ -1.48
CCNT1-203ENST00000550457 FAM13BQ9NYF5 915 aa5.79□□□□□ -1.48
CCNT1-203ENST00000550457 FSCN2O14926 492 aa5.78□□□□□ -1.48
CCNT1-203ENST00000550457 ADAM11O75078 769 aa5.78□□□□□ -1.48
CCNT1-203ENST00000550457 PTCD1O75127 700 aaKnown RBP5.78□□□□□ -1.48
CCNT1-203ENST00000550457 TGFB1P01137 390 aa5.78□□□□□ -1.48
CCNT1-203ENST00000550457 IGLV1-40P01703 118 aa5.78□□□□□ -1.48
CCNT1-203ENST00000550457 MCTP1Q6DN14 999 aa5.78□□□□□ -1.48
CCNT1-203ENST00000550457 CLP1Q92989 425 aaKnown RBP5.78□□□□□ -1.48
CCNT1-203ENST00000550457 SPACA7Q96KW9 195 aa5.78□□□□□ -1.48
CCNT1-203ENST00000550457 POP1Q99575 1024 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms