RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 SEC31BQ9NQW1 1179 aa17.44■□□□□ 0.38
CACNB3-216ENST00000550391 COL4A1P02462 1669 aa17.43■□□□□ 0.38
CACNB3-216ENST00000550391 EYA2O00167 538 aa17.43■□□□□ 0.38
CACNB3-216ENST00000550391 CIAO1O76071 339 aa17.43■□□□□ 0.38
CACNB3-216ENST00000550391 CRY2Q49AN0 593 aa17.43■□□□□ 0.38
CACNB3-216ENST00000550391 ATG9AQ7Z3C6 839 aa17.43■□□□□ 0.38
CACNB3-216ENST00000550391 RHPN1Q8TCX5 695 aa17.43■□□□□ 0.38
CACNB3-216ENST00000550391 KIF1BPQ96EK5 621 aa17.43■□□□□ 0.38
CACNB3-216ENST00000550391 C10orf71Q711Q0 1435 aa17.43■□□□□ 0.38
CACNB3-216ENST00000550391 SASH1O94885 1247 aa17.42■□□□□ 0.38
CACNB3-216ENST00000550391 PUS3Q9BZE2 481 aaKnown RBP17.42■□□□□ 0.38
CACNB3-216ENST00000550391 LNPKQ9C0E8 428 aa17.42■□□□□ 0.38
CACNB3-216ENST00000550391 SPEF2Q9C093 1822 aa17.42■□□□□ 0.38
CACNB3-216ENST00000550391 TAF1P21675 1872 aa17.41■□□□□ 0.38
CACNB3-216ENST00000550391 SMARCA5O60264 1052 aaPredicted RBP17.41■□□□□ 0.38
CACNB3-216ENST00000550391 IL15P40933 162 aaPredicted RBP17.41■□□□□ 0.38
CACNB3-216ENST00000550391 LRRC24Q50LG9 513 aa17.41■□□□□ 0.38
CACNB3-216ENST00000550391 SKAP1Q86WV1 359 aa17.41■□□□□ 0.38
CACNB3-216ENST00000550391 CDC5LQ99459 802 aaKnown RBP17.41■□□□□ 0.38
CACNB3-216ENST00000550391 PDE4AP27815 886 aa17.4■□□□□ 0.38
CACNB3-216ENST00000550391 PDE6BP35913 854 aa17.4■□□□□ 0.38
CACNB3-216ENST00000550391 LDHAL6AQ6ZMR3 332 aa17.4■□□□□ 0.38
CACNB3-216ENST00000550391 PRDM10Q9NQV6 1147 aa17.4■□□□□ 0.38
CACNB3-216ENST00000550391 RIPOR2Q9Y4F9 1068 aa17.4■□□□□ 0.38
CACNB3-216ENST00000550391 COL11A2P13942 1736 aaPredicted RBP17.39■□□□□ 0.37
CACNB3-216ENST00000550391 IGHMBP2P38935 993 aaKnown RBP17.39■□□□□ 0.37
CACNB3-216ENST00000550391 ARHGAP27Q6ZUM4 889 aa17.39■□□□□ 0.37
CACNB3-216ENST00000550391 DDX46Q7L014 1031 aaKnown RBP17.39■□□□□ 0.37
CACNB3-216ENST00000550391 ANKRD18AQ8IVF6 992 aa17.39■□□□□ 0.37
CACNB3-216ENST00000550391 CELF1Q92879 486 aaKnown RBP17.39■□□□□ 0.37
CACNB3-216ENST00000550391 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.39■□□□□ 0.37
CACNB3-216ENST00000550391 KIAA1551Q9HCM1 1747 aa17.38■□□□□ 0.37
CACNB3-216ENST00000550391 KIF13BQ9NQT8 1826 aa17.38■□□□□ 0.37
CACNB3-216ENST00000550391 HOXA10P31260 410 aaPredicted RBP17.38■□□□□ 0.37
CACNB3-216ENST00000550391 TFCP2Q12800 502 aa17.38■□□□□ 0.37
CACNB3-216ENST00000550391 RPGRQ92834 1020 aaKnown RBP17.38■□□□□ 0.37
CACNB3-216ENST00000550391 RBM17Q96I25 401 aaKnown RBP17.38■□□□□ 0.37
CACNB3-216ENST00000550391 MPHOSPH8Q99549 860 aa17.38■□□□□ 0.37
CACNB3-216ENST00000550391 IL1RAPL2Q9NP60 686 aa17.38■□□□□ 0.37
CACNB3-216ENST00000550391 CNNM1Q9NRU3 951 aa17.38■□□□□ 0.37
CACNB3-216ENST00000550391 SRGNP10124 158 aa17.37■□□□□ 0.37
CACNB3-216ENST00000550391 RPS8P62241 208 aaKnown RBP17.37■□□□□ 0.37
CACNB3-216ENST00000550391 GRAPQ13588 217 aa17.37■□□□□ 0.37
CACNB3-216ENST00000550391 CLASRPQ8N2M8 674 aaKnown RBP17.37■□□□□ 0.37
CACNB3-216ENST00000550391 GRAPLQ8TC17 118 aaPredicted RBP17.37■□□□□ 0.37
CACNB3-216ENST00000550391 BSDC1Q9NW68 430 aaPredicted RBP17.37■□□□□ 0.37
CACNB3-216ENST00000550391 BCS1LQ9Y276 419 aa17.37■□□□□ 0.37
CACNB3-216ENST00000550391 A0A1B0GUL6 1792 aa17.36■□□□□ 0.37
CACNB3-216ENST00000550391 NPR1P16066 1061 aa17.36■□□□□ 0.37
CACNB3-216ENST00000550391 RGS3P49796 1198 aa17.36■□□□□ 0.37
CACNB3-216ENST00000550391 TGFB2P61812 414 aa17.36■□□□□ 0.37
CACNB3-216ENST00000550391 CRAMP1Q96RY5 1269 aa17.36■□□□□ 0.37
CACNB3-216ENST00000550391 BCL11AQ9H165 835 aa17.36■□□□□ 0.37
CACNB3-216ENST00000550391 RRAGCQ9HB90 399 aa17.36■□□□□ 0.37
CACNB3-216ENST00000550391 CEP126Q9P2H0 1117 aa17.36■□□□□ 0.37
CACNB3-216ENST00000550391 MROH5Q6ZUA9 1318 aa17.36■□□□□ 0.37
CACNB3-216ENST00000550391 C9orf131Q5VYM1 1079 aa17.35■□□□□ 0.37
CACNB3-216ENST00000550391 VGLL2Q8N8G2 317 aa17.35■□□□□ 0.37
CACNB3-216ENST00000550391 GPR108Q9NPR9 543 aa17.35■□□□□ 0.37
CACNB3-216ENST00000550391 SALL3Q9BXA9 1300 aa17.35■□□□□ 0.37
CACNB3-216ENST00000550391 TNNI3KQ59H18 835 aa17.34■□□□□ 0.37
CACNB3-216ENST00000550391 METTL24Q5JXM2 366 aa17.34■□□□□ 0.37
CACNB3-216ENST00000550391 C2CD5Q86YS7 1000 aa17.34■□□□□ 0.37
CACNB3-216ENST00000550391 OTUD7AQ8TE49 926 aaPredicted RBP17.34■□□□□ 0.37
CACNB3-216ENST00000550391 EAF2Q96CJ1 260 aaPredicted RBP17.34■□□□□ 0.37
CACNB3-216ENST00000550391 MASTLQ96GX5 879 aa17.34■□□□□ 0.37
CACNB3-216ENST00000550391 DLEC1Q9Y238 1755 aa17.34■□□□□ 0.37
CACNB3-216ENST00000550391 FPGT-TNNI3KV9GXZ4 949 aa17.34■□□□□ 0.37
CACNB3-216ENST00000550391 ZNF609O15014 1411 aa17.33■□□□□ 0.36
CACNB3-216ENST00000550391 H0YIN7 160 aa17.33■□□□□ 0.36
CACNB3-216ENST00000550391 MLLT1Q03111 559 aaPredicted RBP17.33■□□□□ 0.36
CACNB3-216ENST00000550391 AACSQ86V21 672 aa17.33■□□□□ 0.36
CACNB3-216ENST00000550391 PLEKHM2Q8IWE5 1019 aa17.33■□□□□ 0.36
CACNB3-216ENST00000550391 AKAP2Q9Y2D5 859 aa17.33■□□□□ 0.36
CACNB3-216ENST00000550391 BBOX1O75936 387 aa17.32■□□□□ 0.36
CACNB3-216ENST00000550391 PDE8BO95263 885 aa17.32■□□□□ 0.36
CACNB3-216ENST00000550391 IFIT2P09913 472 aaKnown RBP17.32■□□□□ 0.36
CACNB3-216ENST00000550391 ALDH1B1P30837 517 aa17.32■□□□□ 0.36
CACNB3-216ENST00000550391 CHRNDQ07001 517 aa17.32■□□□□ 0.36
CACNB3-216ENST00000550391 STYK1Q6J9G0 422 aa17.32■□□□□ 0.36
CACNB3-216ENST00000550391 MINPP1Q9UNW1 487 aa17.32■□□□□ 0.36
CACNB3-216ENST00000550391 LRRC37AA6NMS7 1700 aa17.32■□□□□ 0.36
CACNB3-216ENST00000550391 CHRNA5P30532 468 aa17.31■□□□□ 0.36
CACNB3-216ENST00000550391 CCDC8Q9H0W5 538 aaPredicted RBP17.31■□□□□ 0.36
CACNB3-216ENST00000550391 OSBPL3Q9H4L5 887 aa17.31■□□□□ 0.36
CACNB3-216ENST00000550391 A0A1B0GUL7 405 aa17.3■□□□□ 0.36
CACNB3-216ENST00000550391 MX1P20591 662 aa17.3■□□□□ 0.36
CACNB3-216ENST00000550391 FGFR2P21802 821 aa17.3■□□□□ 0.36
CACNB3-216ENST00000550391 PDE1AP54750 535 aa17.3■□□□□ 0.36
CACNB3-216ENST00000550391 TMC4Q7Z404 712 aa17.3■□□□□ 0.36
CACNB3-216ENST00000550391 HELBQ8NG08 1087 aaPredicted RBP17.3■□□□□ 0.36
CACNB3-216ENST00000550391 TLR7Q9NYK1 1049 aaKnown RBP17.3■□□□□ 0.36
CACNB3-216ENST00000550391 STAP2Q9UGK3 403 aa17.3■□□□□ 0.36
CACNB3-216ENST00000550391 CACNA1SQ13698 1873 aa17.3■□□□□ 0.36
CACNB3-216ENST00000550391 ARAP2Q8WZ64 1704 aa17.3■□□□□ 0.36
CACNB3-216ENST00000550391 PPEF1O14829 653 aaPredicted RBP17.29■□□□□ 0.36
CACNB3-216ENST00000550391 TAF5LO75529 589 aa17.29■□□□□ 0.36
CACNB3-216ENST00000550391 TIMM10P62072 90 aa17.29■□□□□ 0.36
CACNB3-216ENST00000550391 PUM3Q15397 648 aaKnown RBP17.29■□□□□ 0.36
CACNB3-216ENST00000550391 ZNF622Q969S3 477 aaKnown RBP eCLIP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms