RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 HDGFL1Q5TGJ6 251 aa7.63□□□□□ -1.19
SNRPF-202ENST00000549580 RNF43Q68DV7 783 aa7.63□□□□□ -1.19
SNRPF-202ENST00000549580 ABI1Q8IZP0 508 aa7.63□□□□□ -1.19
SNRPF-202ENST00000549580 STAG2Q8N3U4 1231 aa7.63□□□□□ -1.19
SNRPF-202ENST00000549580 DBNDD2Q9BQY9 259 aa7.63□□□□□ -1.19
SNRPF-202ENST00000549580 C7orf69Q9H7B7 122 aa7.63□□□□□ -1.19
SNRPF-202ENST00000549580 RARAP10276 462 aa7.62□□□□□ -1.19
SNRPF-202ENST00000549580 TRIM42Q8IWZ5 723 aa7.62□□□□□ -1.19
SNRPF-202ENST00000549580 EIF2AK2P19525 551 aaKnown RBP7.61□□□□□ -1.19
SNRPF-202ENST00000549580 MAP4K3Q8IVH8 894 aa7.61□□□□□ -1.19
SNRPF-202ENST00000549580 GDF6Q6KF10 455 aaPredicted RBP7.6□□□□□ -1.19
SNRPF-202ENST00000549580 CBLL1Q75N03 491 aa7.6□□□□□ -1.19
SNRPF-202ENST00000549580 HINFPQ9BQA5 517 aa7.6□□□□□ -1.19
SNRPF-202ENST00000549580 TRAIPQ9BWF2 469 aa7.6□□□□□ -1.19
SNRPF-202ENST00000549580 RBM19Q9Y4C8 960 aaKnown RBP7.6□□□□□ -1.19
SNRPF-202ENST00000549580 HMX2A2RU54 273 aa7.59□□□□□ -1.19
SNRPF-202ENST00000549580 NRLP54845 237 aa7.59□□□□□ -1.19
SNRPF-202ENST00000549580 DGKZQ13574 1117 aa7.59□□□□□ -1.19
SNRPF-202ENST00000549580 UVSSAQ2YD98 709 aa7.59□□□□□ -1.19
SNRPF-202ENST00000549580 IL22RA1Q8N6P7 574 aa7.59□□□□□ -1.19
SNRPF-202ENST00000549580 DCAF11Q8TEB1 546 aa7.59□□□□□ -1.19
SNRPF-202ENST00000549580 GLMNQ92990 594 aa7.59□□□□□ -1.19
SNRPF-202ENST00000549580 FAM46AQ96IP4 442 aaKnown RBP7.59□□□□□ -1.19
SNRPF-202ENST00000549580 CALR3Q96L12 384 aaKnown RBP7.59□□□□□ -1.19
SNRPF-202ENST00000549580 WISP1O95388 367 aa7.58□□□□□ -1.2
SNRPF-202ENST00000549580 EPB42P16452 691 aa7.58□□□□□ -1.2
SNRPF-202ENST00000549580 SEC13P55735 322 aa7.58□□□□□ -1.2
SNRPF-202ENST00000549580 PLD4Q96BZ4 506 aa7.58□□□□□ -1.2
SNRPF-202ENST00000549580 PPP1R15AO75807 674 aaPredicted RBP7.57□□□□□ -1.2
SNRPF-202ENST00000549580 MICAL2O94851 1124 aa7.57□□□□□ -1.2
SNRPF-202ENST00000549580 SHKBP1Q8TBC3 707 aa7.57□□□□□ -1.2
SNRPF-202ENST00000549580 UTP4Q969X6 686 aaKnown RBP7.57□□□□□ -1.2
SNRPF-202ENST00000549580 NSUN5Q96P11 429 aaKnown RBP7.57□□□□□ -1.2
SNRPF-202ENST00000549580 C11orf16Q9NQ32 467 aa7.57□□□□□ -1.2
SNRPF-202ENST00000549580 OPLAHO14841 1288 aa7.56□□□□□ -1.2
SNRPF-202ENST00000549580 ARSDP51689 593 aa7.56□□□□□ -1.2
SNRPF-202ENST00000549580 GALNT11Q8NCW6 608 aa7.56□□□□□ -1.2
SNRPF-202ENST00000549580 MYRFLQ96LU7 910 aa7.56□□□□□ -1.2
SNRPF-202ENST00000549580 CEP41Q9BYV8 373 aa7.56□□□□□ -1.2
SNRPF-202ENST00000549580 QTRT2Q9H974 415 aaKnown RBP7.56□□□□□ -1.2
SNRPF-202ENST00000549580 TLR7Q9NYK1 1049 aaKnown RBP7.56□□□□□ -1.2
SNRPF-202ENST00000549580 LOC102724428A0A0B4J2F2 783 aa7.55□□□□□ -1.2
SNRPF-202ENST00000549580 KRTAP9-7A8MTY7 169 aa7.55□□□□□ -1.2
SNRPF-202ENST00000549580 ITGB5P18084 799 aa7.55□□□□□ -1.2
SNRPF-202ENST00000549580 HOXA10P31260 410 aaPredicted RBP7.55□□□□□ -1.2
SNRPF-202ENST00000549580 SIK1P57059 783 aa7.55□□□□□ -1.2
SNRPF-202ENST00000549580 CRTC2Q53ET0 693 aaPredicted RBP7.55□□□□□ -1.2
SNRPF-202ENST00000549580 FBLN7Q53RD9 439 aa7.55□□□□□ -1.2
SNRPF-202ENST00000549580 ASIC4Q96FT7 647 aa7.55□□□□□ -1.2
SNRPF-202ENST00000549580 TRIM33Q9UPN9 1127 aa7.55□□□□□ -1.2
SNRPF-202ENST00000549580 RTCBQ9Y3I0 505 aaKnown RBP7.55□□□□□ -1.2
SNRPF-202ENST00000549580 ZBTB7CA1YPR0 619 aa7.54□□□□□ -1.2
SNRPF-202ENST00000549580 TM4SF5O14894 197 aa7.54□□□□□ -1.2
SNRPF-202ENST00000549580 DPYDQ12882 1025 aa7.54□□□□□ -1.2
SNRPF-202ENST00000549580 SPOCD1Q6ZMY3 1216 aa7.54□□□□□ -1.2
SNRPF-202ENST00000549580 NFXL1Q6ZNB6 911 aa7.54□□□□□ -1.2
SNRPF-202ENST00000549580 TFIP11Q9UBB9 837 aaKnown RBP7.54□□□□□ -1.2
SNRPF-202ENST00000549580 MMP20O60882 483 aa7.53□□□□□ -1.2
SNRPF-202ENST00000549580 IGFBP4P22692 258 aa7.53□□□□□ -1.2
SNRPF-202ENST00000549580 CMTR1Q8N1G2 835 aaKnown RBP7.53□□□□□ -1.2
SNRPF-202ENST00000549580 RETREG2Q8NC44 543 aa7.53□□□□□ -1.2
SNRPF-202ENST00000549580 FAM83CQ9BQN1 747 aa7.53□□□□□ -1.2
SNRPF-202ENST00000549580 XYLBO75191 536 aa7.52□□□□□ -1.21
SNRPF-202ENST00000549580 ARID4AP29374 1257 aaPredicted RBP7.52□□□□□ -1.21
SNRPF-202ENST00000549580 TXNDC11Q6PKC3 985 aa7.52□□□□□ -1.21
SNRPF-202ENST00000549580 ACAD11Q709F0 780 aa7.52□□□□□ -1.21
SNRPF-202ENST00000549580 CLEC10AQ8IUN9 316 aa7.52□□□□□ -1.21
SNRPF-202ENST00000549580 RGL4Q8IZJ4 473 aa7.52□□□□□ -1.21
SNRPF-202ENST00000549580 KCNK4Q9NYG8 393 aa7.52□□□□□ -1.21
SNRPF-202ENST00000549580 LRFN2Q9ULH4 789 aa7.52□□□□□ -1.21
SNRPF-202ENST00000549580 COL19A1Q14993 1142 aa7.51□□□□□ -1.21
SNRPF-202ENST00000549580 MSMPQ1L6U9 139 aa7.51□□□□□ -1.21
SNRPF-202ENST00000549580 FAM20CQ8IXL6 584 aa7.51□□□□□ -1.21
SNRPF-202ENST00000549580 CCER1Q8TC90 406 aaPredicted RBP7.51□□□□□ -1.21
SNRPF-202ENST00000549580 LINC01387J3KSC0 135 aa7.5□□□□□ -1.21
SNRPF-202ENST00000549580 GHRHP01286 108 aa7.5□□□□□ -1.21
SNRPF-202ENST00000549580 HOXD8P13378 290 aaPredicted RBP7.5□□□□□ -1.21
SNRPF-202ENST00000549580 CDC25BP30305 580 aa7.5□□□□□ -1.21
SNRPF-202ENST00000549580 SRPK2P78362 688 aaKnown RBP7.5□□□□□ -1.21
SNRPF-202ENST00000549580 PTK7Q13308 1070 aa7.5□□□□□ -1.21
SNRPF-202ENST00000549580 C11orf91Q3C1V1 193 aa7.5□□□□□ -1.21
SNRPF-202ENST00000549580 CFAP70Q5T0N1 1121 aa7.5□□□□□ -1.21
SNRPF-202ENST00000549580 LCE5AQ5TCM9 118 aa7.5□□□□□ -1.21
SNRPF-202ENST00000549580 ADAMTSL4Q6UY14 1074 aa7.5□□□□□ -1.21
SNRPF-202ENST00000549580 KIAA1211Q6ZU35 1233 aa7.5□□□□□ -1.21
SNRPF-202ENST00000549580 PBXIP1Q96AQ6 731 aa7.5□□□□□ -1.21
SNRPF-202ENST00000549580 MAFBQ9Y5Q3 323 aaPredicted RBP7.5□□□□□ -1.21
SNRPF-202ENST00000549580 KCNMB2Q9Y691 235 aa7.5□□□□□ -1.21
SNRPF-202ENST00000549580 PRNPP04156 253 aa7.49□□□□□ -1.21
SNRPF-202ENST00000549580 PSAPP07602 524 aa7.49□□□□□ -1.21
SNRPF-202ENST00000549580 JUNBP17275 347 aaPredicted RBP7.49□□□□□ -1.21
SNRPF-202ENST00000549580 CD68P34810 354 aaPredicted RBP7.49□□□□□ -1.21
SNRPF-202ENST00000549580 LARP1Q6PKG0 1096 aaKnown RBP7.49□□□□□ -1.21
SNRPF-202ENST00000549580 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.49□□□□□ -1.21
SNRPF-202ENST00000549580 MUC3BQ9H195 1237 aa7.49□□□□□ -1.21
SNRPF-202ENST00000549580 PIM2Q9P1W9 311 aa7.49□□□□□ -1.21
SNRPF-202ENST00000549580 CCDC39Q9UFE4 941 aa7.49□□□□□ -1.21
SNRPF-202ENST00000549580 ACIN1Q9UKV3 1341 aaKnown RBP7.49□□□□□ -1.21
SNRPF-202ENST00000549580 EGFRP00533 1210 aa7.48□□□□□ -1.21
SNRPF-202ENST00000549580 TREML1Q86YW5 311 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms