RNA–Protein interactions for RNA: ENST00000549549.1

PRIM1-204, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-204ENST00000549549 CYP2E1P05181 493 aaPredicted RBP13.37□□□□□ -0.27
PRIM1-204ENST00000549549 CTC1Q2NKJ3 1217 aa13.37□□□□□ -0.27
PRIM1-204ENST00000549549 C6orf118Q5T5N4 469 aa13.37□□□□□ -0.27
PRIM1-204ENST00000549549 RELL1Q8IUW5 271 aa13.37□□□□□ -0.27
PRIM1-204ENST00000549549 KIAA0825Q8IV33 1275 aa13.37□□□□□ -0.27
PRIM1-204ENST00000549549 OR13H1Q8NG92 308 aa13.37□□□□□ -0.27
PRIM1-204ENST00000549549 LATS2Q9NRM7 1088 aa13.37□□□□□ -0.27
PRIM1-204ENST00000549549 DYRK1BQ9Y463 629 aa13.37□□□□□ -0.27
PRIM1-204ENST00000549549 F11P03951 625 aa13.36□□□□□ -0.27
PRIM1-204ENST00000549549 TMEM74Q96NL1 305 aa13.36□□□□□ -0.27
PRIM1-204ENST00000549549 KCNH4Q9UQ05 1017 aa13.36□□□□□ -0.27
PRIM1-204ENST00000549549 GSX2Q9BZM3 304 aa13.35□□□□□ -0.27
PRIM1-204ENST00000549549 RUBCNLQ9H714 662 aa13.35□□□□□ -0.27
PRIM1-204ENST00000549549 KCNQ5Q9NR82 932 aa13.35□□□□□ -0.27
PRIM1-204ENST00000549549 SOS2Q07890 1332 aaPredicted RBP13.35□□□□□ -0.27
PRIM1-204ENST00000549549 TMEM238LA0A1B0GVL6 79 aa13.34□□□□□ -0.27
PRIM1-204ENST00000549549 ANKRD62A6NC57 917 aa13.34□□□□□ -0.27
PRIM1-204ENST00000549549 PPM1GO15355 546 aaPredicted RBP13.34□□□□□ -0.27
PRIM1-204ENST00000549549 SASH3O75995 380 aa13.34□□□□□ -0.27
PRIM1-204ENST00000549549 RLBP1P12271 317 aa13.34□□□□□ -0.27
PRIM1-204ENST00000549549 CCDC85BQ15834 202 aaPredicted RBP13.34□□□□□ -0.27
PRIM1-204ENST00000549549 NBPF6Q5VWK0 638 aa13.34□□□□□ -0.27
PRIM1-204ENST00000549549 ZNF746Q6NUN9 644 aaPredicted RBP13.34□□□□□ -0.27
PRIM1-204ENST00000549549 NBPF4Q96M43 638 aa13.34□□□□□ -0.27
PRIM1-204ENST00000549549 ABCB6Q9NP58 842 aa13.34□□□□□ -0.27
PRIM1-204ENST00000549549 FCGRTP55899 365 aa13.33□□□□□ -0.28
PRIM1-204ENST00000549549 SV2BQ7L1I2 683 aa13.33□□□□□ -0.28
PRIM1-204ENST00000549549 PGBD3Q8N328 593 aa13.33□□□□□ -0.28
PRIM1-204ENST00000549549 TCF12Q99081 682 aa13.33□□□□□ -0.28
PRIM1-204ENST00000549549 GPAMQ9HCL2 828 aa13.33□□□□□ -0.28
PRIM1-204ENST00000549549 KANSL3Q9P2N6 904 aa13.33□□□□□ -0.28
PRIM1-204ENST00000549549 EFSO43281 561 aa13.32□□□□□ -0.28
PRIM1-204ENST00000549549 EIF4A3P38919 411 aaKnown RBP13.32□□□□□ -0.28
PRIM1-204ENST00000549549 CCINQ13939 588 aa13.32□□□□□ -0.28
PRIM1-204ENST00000549549 SDE2Q6IQ49 451 aa13.32□□□□□ -0.28
PRIM1-204ENST00000549549 TRIM56Q9BRZ2 755 aaKnown RBP13.32□□□□□ -0.28
PRIM1-204ENST00000549549 OXCT2Q9BYC2 517 aaPredicted RBP13.32□□□□□ -0.28
PRIM1-204ENST00000549549 MMP20O60882 483 aa13.31□□□□□ -0.28
PRIM1-204ENST00000549549 TARSP26639 723 aaKnown RBP13.31□□□□□ -0.28
PRIM1-204ENST00000549549 LBRQ14739 615 aaKnown RBP13.31□□□□□ -0.28
PRIM1-204ENST00000549549 ZNF662Q6ZS27 426 aa13.31□□□□□ -0.28
PRIM1-204ENST00000549549 EAF1Q96JC9 268 aaPredicted RBP13.31□□□□□ -0.28
PRIM1-204ENST00000549549 LIN7BQ9HAP6 207 aa13.31□□□□□ -0.28
PRIM1-204ENST00000549549 FIGNL2A6NMB9 653 aa13.3□□□□□ -0.28
PRIM1-204ENST00000549549 FAM157BP0CG42 384 aa13.3□□□□□ -0.28
PRIM1-204ENST00000549549 GBP2P32456 591 aaPredicted RBP13.3□□□□□ -0.28
PRIM1-204ENST00000549549 CKAP2LQ8IYA6 745 aa13.3□□□□□ -0.28
PRIM1-204ENST00000549549 ZNF296Q8WUU4 475 aaPredicted RBP13.3□□□□□ -0.28
PRIM1-204ENST00000549549 NT5C1AQ9BXI3 368 aa13.3□□□□□ -0.28
PRIM1-204ENST00000549549 ZFYVE1Q9HBF4 777 aa13.3□□□□□ -0.28
PRIM1-204ENST00000549549 PHF20L1A8MW92 1017 aa13.29□□□□□ -0.28
PRIM1-204ENST00000549549 MINDY4BA8MYZ0 360 aa13.29□□□□□ -0.28
PRIM1-204ENST00000549549 KIF4AO95239 1232 aa13.29□□□□□ -0.28
PRIM1-204ENST00000549549 SFSWAPQ12872 951 aaKnown RBP13.29□□□□□ -0.28
PRIM1-204ENST00000549549 SERINC3Q13530 473 aa13.29□□□□□ -0.28
PRIM1-204ENST00000549549 SCARF1Q14162 830 aa13.29□□□□□ -0.28
PRIM1-204ENST00000549549 EGFLAMQ63HQ2 1017 aa13.29□□□□□ -0.28
PRIM1-204ENST00000549549 CCNJLQ8IV13 435 aa13.29□□□□□ -0.28
PRIM1-204ENST00000549549 RHOVQ96L33 236 aa13.29□□□□□ -0.28
PRIM1-204ENST00000549549 GREM1O60565 184 aa13.28□□□□□ -0.28
PRIM1-204ENST00000549549 HOXD8P13378 290 aaPredicted RBP13.28□□□□□ -0.28
PRIM1-204ENST00000549549 SOX9P48436 509 aa13.28□□□□□ -0.28
PRIM1-204ENST00000549549 NFX1Q12986 1120 aaKnown RBP13.28□□□□□ -0.28
PRIM1-204ENST00000549549 COL9A2Q14055 689 aaPredicted RBP13.28□□□□□ -0.28
PRIM1-204ENST00000549549 NFE2L2Q16236 605 aa13.28□□□□□ -0.28
PRIM1-204ENST00000549549 EFHC2Q5JST6 749 aa13.28□□□□□ -0.28
PRIM1-204ENST00000549549 NLGN1Q8N2Q7 840 aa13.28□□□□□ -0.28
PRIM1-204ENST00000549549 MKL1Q969V6 931 aa13.28□□□□□ -0.28
PRIM1-204ENST00000549549 ZFATQ9P243 1243 aa13.28□□□□□ -0.28
PRIM1-204ENST00000549549 AKAP2Q9Y2D5 859 aa13.28□□□□□ -0.28
PRIM1-204ENST00000549549 SSBP05455 408 aaKnown RBP eCLIP13.27□□□□□ -0.29
PRIM1-204ENST00000549549 GARTP22102 1010 aa13.27□□□□□ -0.29
PRIM1-204ENST00000549549 SOX18P35713 384 aa13.27□□□□□ -0.29
PRIM1-204ENST00000549549 NASPP49321 788 aaPredicted RBP13.27□□□□□ -0.29
PRIM1-204ENST00000549549 DTHD1Q6ZMT9 781 aa13.27□□□□□ -0.29
PRIM1-204ENST00000549549 PHC3Q8NDX5 983 aa13.27□□□□□ -0.29
PRIM1-204ENST00000549549 CNTNAP3BQ96NU0 1288 aa13.27□□□□□ -0.29
PRIM1-204ENST00000549549 CNTNAP3Q9BZ76 1288 aa13.27□□□□□ -0.29
PRIM1-204ENST00000549549 EFCC1Q9HA90 598 aa13.27□□□□□ -0.29
PRIM1-204ENST00000549549 STRIP2Q9ULQ0 834 aa13.27□□□□□ -0.29
PRIM1-204ENST00000549549 EFR3BQ9Y2G0 817 aa13.27□□□□□ -0.29
PRIM1-204ENST00000549549 LAMC2Q13753 1193 aa13.26□□□□□ -0.29
PRIM1-204ENST00000549549 FBXL19Q6PCT2 694 aa13.26□□□□□ -0.29
PRIM1-204ENST00000549549 FIGNL1Q6PIW4 674 aa13.26□□□□□ -0.29
PRIM1-204ENST00000549549 ANKRD13AQ8IZ07 590 aa13.26□□□□□ -0.29
PRIM1-204ENST00000549549 ZNF408Q9H9D4 720 aa13.26□□□□□ -0.29
PRIM1-204ENST00000549549 GINM1Q9NU53 330 aa13.26□□□□□ -0.29
PRIM1-204ENST00000549549 TLR7Q9NYK1 1049 aaKnown RBP13.26□□□□□ -0.29
PRIM1-204ENST00000549549 SBNO2Q9Y2G9 1366 aa13.25□□□□□ -0.29
PRIM1-204ENST00000549549 F6X3S4 739 aa13.25□□□□□ -0.29
PRIM1-204ENST00000549549 ATXN7O15265 892 aaPredicted RBP13.25□□□□□ -0.29
PRIM1-204ENST00000549549 THBS1P07996 1170 aa13.25□□□□□ -0.29
PRIM1-204ENST00000549549 RARAP10276 462 aa13.25□□□□□ -0.29
PRIM1-204ENST00000549549 BMS1Q14692 1282 aaKnown RBP13.25□□□□□ -0.29
PRIM1-204ENST00000549549 KRT25Q7Z3Z0 450 aa13.25□□□□□ -0.29
PRIM1-204ENST00000549549 ZKSCAN3Q9BRR0 538 aa13.25□□□□□ -0.29
PRIM1-204ENST00000549549 PLA2G2EQ9NZK7 142 aa13.25□□□□□ -0.29
PRIM1-204ENST00000549549 MAP3K6O95382 1288 aa13.24□□□□□ -0.29
PRIM1-204ENST00000549549 AVPP01185 164 aa13.24□□□□□ -0.29
PRIM1-204ENST00000549549 GAS2L1Q99501 681 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms