RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 MROH5Q6ZUA9 1318 aa12□□□□□ -0.49
RAB5B-206ENST00000549505 A0A1B0GUL7 405 aa12□□□□□ -0.49
RAB5B-206ENST00000549505 ARID4AP29374 1257 aaPredicted RBP12□□□□□ -0.49
RAB5B-206ENST00000549505 TMEM87AQ8NBN3 555 aa12□□□□□ -0.49
RAB5B-206ENST00000549505 PAG1Q9NWQ8 432 aa12□□□□□ -0.49
RAB5B-206ENST00000549505 PODXL2Q9NZ53 605 aa12□□□□□ -0.49
RAB5B-206ENST00000549505 TRAK2O60296 914 aa11.99□□□□□ -0.49
RAB5B-206ENST00000549505 IFIT5Q13325 482 aaKnown RBP11.99□□□□□ -0.49
RAB5B-206ENST00000549505 ANKRD1Q15327 319 aa11.99□□□□□ -0.49
RAB5B-206ENST00000549505 LRRFIP1Q32MZ4 808 aaKnown RBP11.99□□□□□ -0.49
RAB5B-206ENST00000549505 SLC10A5Q5PT55 438 aa11.99□□□□□ -0.49
RAB5B-206ENST00000549505 CEP126Q9P2H0 1117 aa11.99□□□□□ -0.49
RAB5B-206ENST00000549505 TIAM2Q8IVF5 1701 aa11.99□□□□□ -0.49
RAB5B-206ENST00000549505 KIAA1551Q9HCM1 1747 aa11.99□□□□□ -0.49
RAB5B-206ENST00000549505 NTSR2O95665 410 aa11.99□□□□□ -0.49
RAB5B-206ENST00000549505 JARID2Q92833 1246 aaPredicted RBP11.99□□□□□ -0.49
RAB5B-206ENST00000549505 ZMYM6O95789 1325 aa11.99□□□□□ -0.49
RAB5B-206ENST00000549505 ZKSCAN1P17029 563 aaPredicted RBP11.98□□□□□ -0.49
RAB5B-206ENST00000549505 AK2P54819 239 aa11.98□□□□□ -0.49
RAB5B-206ENST00000549505 KLHL40Q2TBA0 621 aa11.98□□□□□ -0.49
RAB5B-206ENST00000549505 ZGPATQ8N5A5 531 aaKnown RBP11.98□□□□□ -0.49
RAB5B-206ENST00000549505 C4AP0C0L4 1744 aa11.98□□□□□ -0.49
RAB5B-206ENST00000549505 C4BP0C0L5 1744 aa11.98□□□□□ -0.49
RAB5B-206ENST00000549505 ANKRD18BA2A2Z9 1011 aa11.98□□□□□ -0.49
RAB5B-206ENST00000549505 IRS4O14654 1257 aaPredicted RBP11.98□□□□□ -0.49
RAB5B-206ENST00000549505 ZNF589Q86UQ0 364 aaPredicted RBP11.98□□□□□ -0.49
RAB5B-206ENST00000549505 PUS3Q9BZE2 481 aaKnown RBP11.98□□□□□ -0.49
RAB5B-206ENST00000549505 IGSF3O75054 1194 aa11.97□□□□□ -0.49
RAB5B-206ENST00000549505 FAM89AQ96GI7 184 aa11.97□□□□□ -0.49
RAB5B-206ENST00000549505 CYP46A1Q9Y6A2 500 aa11.97□□□□□ -0.49
RAB5B-206ENST00000549505 WDR19Q8NEZ3 1342 aa11.97□□□□□ -0.49
RAB5B-206ENST00000549505 RNF113AO15541 343 aaKnown RBP11.97□□□□□ -0.49
RAB5B-206ENST00000549505 RPS6KB1P23443 525 aa11.97□□□□□ -0.49
RAB5B-206ENST00000549505 EVCP57679 992 aa11.97□□□□□ -0.49
RAB5B-206ENST00000549505 HSP90AA1P07900 732 aaKnown RBP11.97□□□□□ -0.49
RAB5B-206ENST00000549505 ITGA6P23229 1130 aa11.97□□□□□ -0.49
RAB5B-206ENST00000549505 ADCK5Q3MIX3 580 aa11.97□□□□□ -0.49
RAB5B-206ENST00000549505 XAGE2Q96GT9 111 aa11.97□□□□□ -0.49
RAB5B-206ENST00000549505 LMBRD1Q9NUN5 540 aa11.97□□□□□ -0.49
RAB5B-206ENST00000549505 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.97□□□□□ -0.49
RAB5B-206ENST00000549505 CARMIL3Q8ND23 1372 aa11.97□□□□□ -0.49
RAB5B-206ENST00000549505 PDE8BO95263 885 aa11.96□□□□□ -0.49
RAB5B-206ENST00000549505 ADAMTS2O95450 1211 aa11.96□□□□□ -0.49
RAB5B-206ENST00000549505 HMGB1P09429 215 aaKnown RBP11.96□□□□□ -0.49
RAB5B-206ENST00000549505 PRPF40BQ6NWY9 871 aaKnown RBP11.96□□□□□ -0.49
RAB5B-206ENST00000549505 SPRYD3Q8NCJ5 442 aa11.96□□□□□ -0.49
RAB5B-206ENST00000549505 GREM2Q9H772 168 aa11.96□□□□□ -0.49
RAB5B-206ENST00000549505 PDRG1Q9NUG6 133 aa11.96□□□□□ -0.49
RAB5B-206ENST00000549505 ATP6V1AP38606 617 aa11.96□□□□□ -0.5
RAB5B-206ENST00000549505 SF3B3Q15393 1217 aaKnown RBP11.96□□□□□ -0.5
RAB5B-206ENST00000549505 SUSD4Q5VX71 490 aa11.96□□□□□ -0.5
RAB5B-206ENST00000549505 ZNF594Q96JF6 807 aaPredicted RBP11.96□□□□□ -0.5
RAB5B-206ENST00000549505 UTP14AQ9BVJ6 771 aaKnown RBP11.96□□□□□ -0.5
RAB5B-206ENST00000549505 ST3GAL1Q11201 340 aa11.95□□□□□ -0.5
RAB5B-206ENST00000549505 CCDC158Q5M9N0 1113 aa11.95□□□□□ -0.5
RAB5B-206ENST00000549505 TMED8Q6PL24 325 aaPredicted RBP11.95□□□□□ -0.5
RAB5B-206ENST00000549505 WDR33Q9C0J8 1336 aaKnown RBP11.95□□□□□ -0.5
RAB5B-206ENST00000549505 PDS5AQ29RF7 1337 aaKnown RBP11.95□□□□□ -0.5
RAB5B-206ENST00000549505 IFIT1P09914 478 aaKnown RBP11.95□□□□□ -0.5
RAB5B-206ENST00000549505 UQCRFS1P1P0C7P4 283 aa11.95□□□□□ -0.5
RAB5B-206ENST00000549505 CASTP20810 708 aaKnown RBP11.95□□□□□ -0.5
RAB5B-206ENST00000549505 TIMM10P62072 90 aa11.95□□□□□ -0.5
RAB5B-206ENST00000549505 TTF1Q15361 905 aaPredicted RBP11.95□□□□□ -0.5
RAB5B-206ENST00000549505 ZNF652Q9Y2D9 606 aa11.95□□□□□ -0.5
RAB5B-206ENST00000549505 GOLGA6L22H0YM25 854 aa11.94□□□□□ -0.5
RAB5B-206ENST00000549505 EXOSC10Q01780 885 aaKnown RBP11.94□□□□□ -0.5
RAB5B-206ENST00000549505 L1TD1Q5T7N2 865 aaKnown RBP11.94□□□□□ -0.5
RAB5B-206ENST00000549505 TRMT112Q9UI30 125 aaKnown RBP11.94□□□□□ -0.5
RAB5B-206ENST00000549505 MAST3O60307 1309 aa11.94□□□□□ -0.5
RAB5B-206ENST00000549505 FOXP2O15409 715 aa11.94□□□□□ -0.5
RAB5B-206ENST00000549505 TOB2Q14106 344 aaPredicted RBP11.94□□□□□ -0.5
RAB5B-206ENST00000549505 LINC00116Q8NCU8 138 aa11.94□□□□□ -0.5
RAB5B-206ENST00000549505 LPIN2Q92539 896 aa11.94□□□□□ -0.5
RAB5B-206ENST00000549505 JAKMIP1Q96N16 626 aaKnown RBP11.94□□□□□ -0.5
RAB5B-206ENST00000549505 UPF3BQ9BZI7 483 aaKnown RBP11.94□□□□□ -0.5
RAB5B-206ENST00000549505 ZNF445P59923 1031 aa11.93□□□□□ -0.5
RAB5B-206ENST00000549505 UBE3CQ15386 1083 aa11.93□□□□□ -0.5
RAB5B-206ENST00000549505 PUM3Q15397 648 aaKnown RBP11.93□□□□□ -0.5
RAB5B-206ENST00000549505 ATP2B3Q16720 1220 aa11.93□□□□□ -0.5
RAB5B-206ENST00000549505 MAST2Q6P0Q8 1798 aa11.93□□□□□ -0.5
RAB5B-206ENST00000549505 COL4A1P02462 1669 aa11.93□□□□□ -0.5
RAB5B-206ENST00000549505 RPS6KA4O75676 772 aa11.93□□□□□ -0.5
RAB5B-206ENST00000549505 PKP1Q13835 747 aa11.93□□□□□ -0.5
RAB5B-206ENST00000549505 ALX1Q15699 326 aa11.93□□□□□ -0.5
RAB5B-206ENST00000549505 ZNF804BA4D1E1 1349 aa11.93□□□□□ -0.5
RAB5B-206ENST00000549505 ZSCAN25Q6NSZ9 544 aa11.93□□□□□ -0.5
RAB5B-206ENST00000549505 APPBP2Q92624 585 aa11.93□□□□□ -0.5
RAB5B-206ENST00000549505 EDC3Q96F86 508 aaKnown RBP11.93□□□□□ -0.5
RAB5B-206ENST00000549505 RGPD3A6NKT7 1758 aaPredicted RBP11.92□□□□□ -0.5
RAB5B-206ENST00000549505 RGPD4Q7Z3J3 1758 aa11.92□□□□□ -0.5
RAB5B-206ENST00000549505 UBAP1LF5GYI3 381 aa11.92□□□□□ -0.5
RAB5B-206ENST00000549505 LLPHQ9BRT6 129 aaKnown RBP11.92□□□□□ -0.5
RAB5B-206ENST00000549505 DUOX1Q9NRD9 1551 aa11.92□□□□□ -0.5
RAB5B-206ENST00000549505 TCRBV5S4A2TA0A5A2 114 aa11.92□□□□□ -0.5
RAB5B-206ENST00000549505 CYP21A2P08686 494 aa11.92□□□□□ -0.5
RAB5B-206ENST00000549505 ADORA1P30542 326 aa11.92□□□□□ -0.5
RAB5B-206ENST00000549505 BLOC1S2Q6QNY1 142 aa11.92□□□□□ -0.5
RAB5B-206ENST00000549505 LDHAL6AQ6ZMR3 332 aa11.92□□□□□ -0.5
RAB5B-206ENST00000549505 NARFQ9UHQ1 456 aa11.92□□□□□ -0.5
RAB5B-206ENST00000549505 UBR3Q6ZT12 1888 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms