RNA–Protein interactions for RNA: ENST00000549302.1

ARL1-206, Transcript of ADP ribosylation factor like GTPase 1, human

TSL 3

Gene ARL1, Length 725 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARL1-206	ENST00000549302	VEGFB	P49765	207 aa		12.84	□□□□□ -0.35
ARL1-206	ENST00000549302	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	12.84	□□□□□ -0.35
ARL1-206	ENST00000549302	ZNF277	Q9NRM2	450 aa	Predicted RBP	12.84	□□□□□ -0.35
ARL1-206	ENST00000549302	NIP7	Q9Y221	180 aa	Known RBP eCLIP	12.84	□□□□□ -0.35
ARL1-206	ENST00000549302	NUDC	Q9Y266	331 aa		12.84	□□□□□ -0.35
ARL1-206	ENST00000549302	KIF7	Q2M1P5	1343 aa		12.84	□□□□□ -0.35
ARL1-206	ENST00000549302	FAM177B	A6PVY3	158 aa		12.83	□□□□□ -0.36
ARL1-206	ENST00000549302	FECH	P22830	423 aa		12.83	□□□□□ -0.36
ARL1-206	ENST00000549302	ALDH1B1	P30837	517 aa		12.83	□□□□□ -0.36
ARL1-206	ENST00000549302	JDP2	Q8WYK2	163 aa		12.83	□□□□□ -0.36
ARL1-206	ENST00000549302	PASK	Q96RG2	1323 aa		12.83	□□□□□ -0.36
ARL1-206	ENST00000549302	ADAMTS7	Q9UKP4	1686 aa		12.83	□□□□□ -0.36
ARL1-206	ENST00000549302	PIP4K2A	P48426	406 aa	Predicted RBP	12.82	□□□□□ -0.36
ARL1-206	ENST00000549302	MAP2K1	Q02750	393 aa	Predicted RBP	12.82	□□□□□ -0.36
ARL1-206	ENST00000549302	DEFB115	Q30KQ5	88 aa		12.82	□□□□□ -0.36
ARL1-206	ENST00000549302	CNTROB	Q8N137	903 aa		12.82	□□□□□ -0.36
ARL1-206	ENST00000549302	C7orf43	Q8WVR3	580 aa		12.82	□□□□□ -0.36
ARL1-206	ENST00000549302	ABT1	Q9ULW3	272 aa	Known RBP	12.82	□□□□□ -0.36
ARL1-206	ENST00000549302	USP16	Q9Y5T5	823 aa		12.82	□□□□□ -0.36
ARL1-206	ENST00000549302	SCN11A	Q9UI33	1791 aa		12.81	□□□□□ -0.36
ARL1-206	ENST00000549302	SBF1	O95248	1867 aa		12.81	□□□□□ -0.36
ARL1-206	ENST00000549302	PER1	O15534	1290 aa	Predicted RBP	12.81	□□□□□ -0.36
ARL1-206	ENST00000549302	KCNQ3	O43525	872 aa		12.81	□□□□□ -0.36
ARL1-206	ENST00000549302	LMOD1	P29536	600 aa	Predicted RBP	12.81	□□□□□ -0.36
ARL1-206	ENST00000549302	PRKAR2B	P31323	418 aa		12.81	□□□□□ -0.36
ARL1-206	ENST00000549302	IARS	P41252	1262 aa	Known RBP	12.81	□□□□□ -0.36
ARL1-206	ENST00000549302	LBX1	P52954	281 aa		12.81	□□□□□ -0.36
ARL1-206	ENST00000549302	EIF6	P56537	245 aa	Known RBP	12.81	□□□□□ -0.36
ARL1-206	ENST00000549302	SYNE4	Q8N205	404 aa		12.81	□□□□□ -0.36
ARL1-206	ENST00000549302	BEGAIN	Q9BUH8	593 aa		12.81	□□□□□ -0.36
ARL1-206	ENST00000549302	WBP1L	Q9NX94	342 aa		12.81	□□□□□ -0.36
ARL1-206	ENST00000549302	NRXN2	Q9P2S2	1712 aa		12.81	□□□□□ -0.36
ARL1-206	ENST00000549302	ZNF541	Q9H0D2	1346 aa		12.81	□□□□□ -0.36
ARL1-206	ENST00000549302	ITGBL1	O95965	494 aa	Predicted RBP	12.8	□□□□□ -0.36
ARL1-206	ENST00000549302	MAP1S	Q66K74	1059 aa	Predicted RBP	12.8	□□□□□ -0.36
ARL1-206	ENST00000549302	GPC2	Q8N158	579 aa		12.8	□□□□□ -0.36
ARL1-206	ENST00000549302	NYX	Q9GZU5	481 aa		12.8	□□□□□ -0.36
ARL1-206	ENST00000549302	TMX4	Q9H1E5	349 aa	Predicted RBP	12.8	□□□□□ -0.36
ARL1-206	ENST00000549302	HPS5	Q9UPZ3	1129 aa		12.8	□□□□□ -0.36
ARL1-206	ENST00000549302	KLRG2	A4D1S0	409 aa	Predicted RBP	12.79	□□□□□ -0.36
ARL1-206	ENST00000549302	U2AF1L5	P0DN76	240 aa	Predicted RBP	12.79	□□□□□ -0.36
ARL1-206	ENST00000549302	U2AF1	Q01081	240 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
ARL1-206	ENST00000549302	CC2D2B	Q6DHV5	1058 aa		12.79	□□□□□ -0.36
ARL1-206	ENST00000549302	PHACTR3	Q96KR7	559 aa		12.79	□□□□□ -0.36
ARL1-206	ENST00000549302	TSR3	Q9UJK0	312 aa	Known RBP	12.79	□□□□□ -0.36
ARL1-206	ENST00000549302	GJA3	Q9Y6H8	435 aa		12.79	□□□□□ -0.36
ARL1-206	ENST00000549302	RNF123	Q5XPI4	1314 aa		12.79	□□□□□ -0.36
ARL1-206	ENST00000549302	CEMIP	Q8WUJ3	1361 aa		12.79	□□□□□ -0.36
ARL1-206	ENST00000549302	RASSF10	A6NK89	507 aa		12.78	□□□□□ -0.36
ARL1-206	ENST00000549302	FZD9	O00144	591 aa		12.78	□□□□□ -0.36
ARL1-206	ENST00000549302	OAT	P04181	439 aa		12.78	□□□□□ -0.36
ARL1-206	ENST00000549302	NEFM	P07197	916 aa		12.78	□□□□□ -0.36
ARL1-206	ENST00000549302	ECE1	P42892	770 aa		12.78	□□□□□ -0.36
ARL1-206	ENST00000549302	GRIPAP1	Q4V328	841 aa		12.78	□□□□□ -0.36
ARL1-206	ENST00000549302	SWT1	Q5T5J6	900 aa	Known RBP	12.78	□□□□□ -0.36
ARL1-206	ENST00000549302	OLFM4	Q6UX06	510 aa		12.78	□□□□□ -0.36
ARL1-206	ENST00000549302	MCM10	Q7L590	875 aa		12.78	□□□□□ -0.36
ARL1-206	ENST00000549302	RPGR	Q92834	1020 aa	Known RBP	12.78	□□□□□ -0.36
ARL1-206	ENST00000549302	WDR33	Q9C0J8	1336 aa	Known RBP	12.78	□□□□□ -0.36
ARL1-206	ENST00000549302	AFDN	P55196	1824 aa	Known RBP	12.78	□□□□□ -0.36
ARL1-206	ENST00000549302	PRAMEF22	A3QJZ6	481 aa		12.77	□□□□□ -0.37
ARL1-206	ENST00000549302	DNAJB2	P25686	324 aa		12.77	□□□□□ -0.37
ARL1-206	ENST00000549302	PSMD1	Q99460	953 aa		12.77	□□□□□ -0.37
ARL1-206	ENST00000549302	RSPH6A	Q9H0K4	717 aa		12.77	□□□□□ -0.37
ARL1-206	ENST00000549302	NPC1L1	Q9UHC9	1359 aa		12.77	□□□□□ -0.37
ARL1-206	ENST00000549302	TIAM2	Q8IVF5	1701 aa		12.76	□□□□□ -0.37
ARL1-206	ENST00000549302	RCCD1	A6NED2	376 aa		12.76	□□□□□ -0.37
ARL1-206	ENST00000549302	PPP4C	P60510	307 aa		12.76	□□□□□ -0.37
ARL1-206	ENST00000549302	GRM1	Q13255	1194 aa		12.76	□□□□□ -0.37
ARL1-206	ENST00000549302	KIF6	Q6ZMV9	814 aa		12.76	□□□□□ -0.37
ARL1-206	ENST00000549302	LARGE2	Q8N3Y3	721 aa		12.76	□□□□□ -0.37
ARL1-206	ENST00000549302	NGEF	Q8N5V2	710 aa		12.76	□□□□□ -0.37
ARL1-206	ENST00000549302	DDX21	Q9NR30	783 aa	Known RBP eCLIP	12.76	□□□□□ -0.37
ARL1-206	ENST00000549302	HTATSF1	O43719	755 aa	Known RBP	12.75	□□□□□ -0.37
ARL1-206	ENST00000549302	RNF40	O75150	1001 aa		12.75	□□□□□ -0.37
ARL1-206	ENST00000549302	HSPA8	P11142	646 aa	Known RBP	12.75	□□□□□ -0.37
ARL1-206	ENST00000549302	TAF7	Q15545	349 aa	Predicted RBP	12.75	□□□□□ -0.37
ARL1-206	ENST00000549302	PXYLP1	Q8TE99	480 aa		12.75	□□□□□ -0.37
ARL1-206	ENST00000549302	ABHD8	Q96I13	439 aa		12.75	□□□□□ -0.37
ARL1-206	ENST00000549302	RBM17	Q96I25	401 aa	Known RBP	12.75	□□□□□ -0.37
ARL1-206	ENST00000549302	DLEC1	Q9Y238	1755 aa		12.75	□□□□□ -0.37
ARL1-206	ENST00000549302	HLF	Q16534	295 aa		12.74	□□□□□ -0.37
ARL1-206	ENST00000549302	NBPF10	Q6P3W6	841 aa	Known RBP	12.74	□□□□□ -0.37
ARL1-206	ENST00000549302	NYAP1	Q6ZVC0	841 aa		12.74	□□□□□ -0.37
ARL1-206	ENST00000549302	METTL3	Q86U44	580 aa	Known RBP	12.74	□□□□□ -0.37
ARL1-206	ENST00000549302	NIM1K	Q8IY84	436 aa		12.74	□□□□□ -0.37
ARL1-206	ENST00000549302	NBPF15	Q8N660	670 aa		12.74	□□□□□ -0.37
ARL1-206	ENST00000549302	PNISR	Q8TF01	805 aa	Known RBP	12.74	□□□□□ -0.37
ARL1-206	ENST00000549302	CAPNS2	Q96L46	248 aa		12.74	□□□□□ -0.37
ARL1-206	ENST00000549302	ERVV-1	B6SEH8	477 aa		12.73	□□□□□ -0.37
ARL1-206	ENST00000549302	DCTN1	Q14203	1278 aa		12.73	□□□□□ -0.37
ARL1-206	ENST00000549302	CRY2	Q49AN0	593 aa		12.73	□□□□□ -0.37
ARL1-206	ENST00000549302	USP50	Q70EL3	339 aa	Predicted RBP	12.73	□□□□□ -0.37
ARL1-206	ENST00000549302	NUTM1	Q86Y26	1132 aa		12.73	□□□□□ -0.37
ARL1-206	ENST00000549302	GPR101	Q96P66	508 aa	Predicted RBP	12.73	□□□□□ -0.37
ARL1-206	ENST00000549302	TMEM134	Q9H6X4	195 aa		12.73	□□□□□ -0.37
ARL1-206	ENST00000549302	PLA2G2E	Q9NZK7	142 aa		12.73	□□□□□ -0.37
ARL1-206	ENST00000549302	RRP7A	Q9Y3A4	280 aa	Known RBP	12.73	□□□□□ -0.37
ARL1-206	ENST00000549302	CCDC85C	A6NKD9	419 aa		12.72	□□□□□ -0.37
ARL1-206	ENST00000549302	TCERG1	O14776	1098 aa	Known RBP	12.72	□□□□□ -0.37

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