RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 RIMBP2O15034 1052 aa16.01■□□□□ 0.15
DDX54-206ENST00000549271 VIL1P09327 827 aaKnown RBP16.01■□□□□ 0.15
DDX54-206ENST00000549271 PDIA6Q15084 440 aa16.01■□□□□ 0.15
DDX54-206ENST00000549271 RALBP1Q15311 655 aa16.01■□□□□ 0.15
DDX54-206ENST00000549271 NLRP10Q86W26 655 aa16.01■□□□□ 0.15
DDX54-206ENST00000549271 CFHR5Q9BXR6 569 aa16.01■□□□□ 0.15
DDX54-206ENST00000549271 POLLQ9UGP5 575 aa16.01■□□□□ 0.15
DDX54-206ENST00000549271 COL4A1P02462 1669 aa16■□□□□ 0.15
DDX54-206ENST00000549271 ZNF280AP59817 542 aaPredicted RBP16■□□□□ 0.15
DDX54-206ENST00000549271 ANGEL2Q5VTE6 544 aaKnown RBP16■□□□□ 0.15
DDX54-206ENST00000549271 THUMPD2Q9BTF0 503 aaKnown RBP16■□□□□ 0.15
DDX54-206ENST00000549271 NSFL1CQ9UNZ2 370 aaKnown RBP16■□□□□ 0.15
DDX54-206ENST00000549271 KIAA0100Q14667 2235 aaKnown RBP16■□□□□ 0.15
DDX54-206ENST00000549271 SH3TC1Q8TE82 1336 aa15.99■□□□□ 0.15
DDX54-206ENST00000549271 SZT2Q5T011 3432 aa15.99■□□□□ 0.15
DDX54-206ENST00000549271 POTEFA5A3E0 1075 aa15.99■□□□□ 0.15
DDX54-206ENST00000549271 FKTNO75072 461 aa15.99■□□□□ 0.15
DDX54-206ENST00000549271 ZEB1P37275 1124 aaPredicted RBP15.99■□□□□ 0.15
DDX54-206ENST00000549271 SCARF1Q14162 830 aa15.99■□□□□ 0.15
DDX54-206ENST00000549271 DOK7Q18PE1 504 aa15.99■□□□□ 0.15
DDX54-206ENST00000549271 MOB2Q70IA6 237 aa15.99■□□□□ 0.15
DDX54-206ENST00000549271 PITPNM2Q9BZ72 1349 aa15.98■□□□□ 0.15
DDX54-206ENST00000549271 MAPK8IP3Q9UPT6 1336 aa15.98■□□□□ 0.15
DDX54-206ENST00000549271 C6orf229H3BNL8 230 aa15.98■□□□□ 0.15
DDX54-206ENST00000549271 GPSM2P81274 684 aa15.98■□□□□ 0.15
DDX54-206ENST00000549271 EYA3Q99504 573 aa15.98■□□□□ 0.15
DDX54-206ENST00000549271 R3HDMLQ9H3Y0 253 aa15.98■□□□□ 0.15
DDX54-206ENST00000549271 BABAM1Q9NWV8 329 aa15.98■□□□□ 0.15
DDX54-206ENST00000549271 UBE2Q2LH0YL09 131 aa15.97■□□□□ 0.15
DDX54-206ENST00000549271 HSP90AB3PQ58FF7 597 aa15.97■□□□□ 0.15
DDX54-206ENST00000549271 INTS3Q68E01 1043 aaKnown RBP15.97■□□□□ 0.15
DDX54-206ENST00000549271 CELF1Q92879 486 aaKnown RBP15.97■□□□□ 0.15
DDX54-206ENST00000549271 TRMT112Q9UI30 125 aaKnown RBP15.97■□□□□ 0.15
DDX54-206ENST00000549271 PROSER3Q2NL68 480 aa15.96■□□□□ 0.15
DDX54-206ENST00000549271 AGBL3Q8NEM8 1001 aa15.96■□□□□ 0.15
DDX54-206ENST00000549271 TBC1D16Q8TBP0 767 aa15.96■□□□□ 0.15
DDX54-206ENST00000549271 TCIRG1Q13488 830 aa15.95■□□□□ 0.14
DDX54-206ENST00000549271 NECTIN2Q92692 538 aa15.95■□□□□ 0.14
DDX54-206ENST00000549271 GMLQ99445 158 aa15.95■□□□□ 0.14
DDX54-206ENST00000549271 LAMB1P07942 1786 aa15.95■□□□□ 0.14
DDX54-206ENST00000549271 ANXA1P04083 346 aa15.94■□□□□ 0.14
DDX54-206ENST00000549271 SREBF2Q12772 1141 aa15.94■□□□□ 0.14
DDX54-206ENST00000549271 SF3B3Q15393 1217 aaKnown RBP15.94■□□□□ 0.14
DDX54-206ENST00000549271 RSBN1LQ6PCB5 846 aaPredicted RBP15.94■□□□□ 0.14
DDX54-206ENST00000549271 TRIOBPQ9H2D6 2365 aa15.94■□□□□ 0.14
DDX54-206ENST00000549271 CEP290O15078 2479 aa15.93■□□□□ 0.14
DDX54-206ENST00000549271 OTOP1Q7RTM1 612 aa15.93■□□□□ 0.14
DDX54-206ENST00000549271 MYOZ2Q9NPC6 264 aa15.93■□□□□ 0.14
DDX54-206ENST00000549271 TSPYL4Q9UJ04 414 aa15.93■□□□□ 0.14
DDX54-206ENST00000549271 SCAF8Q9UPN6 1271 aaKnown RBP15.93■□□□□ 0.14
DDX54-206ENST00000549271 COLQQ9Y215 455 aaPredicted RBP15.93■□□□□ 0.14
DDX54-206ENST00000549271 MYBBP1AQ9BQG0 1328 aaKnown RBP15.93■□□□□ 0.14
DDX54-206ENST00000549271 RIPK4P57078 832 aa15.92■□□□□ 0.14
DDX54-206ENST00000549271 LMOD3Q0VAK6 560 aa15.92■□□□□ 0.14
DDX54-206ENST00000549271 MKRN3Q13064 507 aaKnown RBP15.92■□□□□ 0.14
DDX54-206ENST00000549271 PRAMEF18Q5VWM3 479 aa15.92■□□□□ 0.14
DDX54-206ENST00000549271 COPS6Q7L5N1 327 aa15.92■□□□□ 0.14
DDX54-206ENST00000549271 ZC3H12CQ9C0D7 883 aaKnown RBP15.92■□□□□ 0.14
DDX54-206ENST00000549271 PODXL2Q9NZ53 605 aa15.92■□□□□ 0.14
DDX54-206ENST00000549271 TRIM17Q9Y577 477 aa15.92■□□□□ 0.14
DDX54-206ENST00000549271 ZNF646O15015 1829 aaPredicted RBP15.91■□□□□ 0.14
DDX54-206ENST00000549271 USP17L8P0C7I0 530 aa15.91■□□□□ 0.14
DDX54-206ENST00000549271 EIF2S2P20042 333 aaKnown RBP15.91■□□□□ 0.14
DDX54-206ENST00000549271 TMPOP42166 694 aaKnown RBP15.91■□□□□ 0.14
DDX54-206ENST00000549271 XAGE3Q8WTP9 111 aa15.91■□□□□ 0.14
DDX54-206ENST00000549271 PRKRIP1Q9H875 184 aaPredicted RBP15.91■□□□□ 0.14
DDX54-206ENST00000549271 ALDH1A1P00352 501 aa15.9■□□□□ 0.14
DDX54-206ENST00000549271 EN2P19622 333 aaPredicted RBP15.9■□□□□ 0.14
DDX54-206ENST00000549271 TTLL12Q14166 644 aaPredicted RBP15.9■□□□□ 0.14
DDX54-206ENST00000549271 ARMC5Q96C12 935 aa15.9■□□□□ 0.14
DDX54-206ENST00000549271 RPS8P62241 208 aaKnown RBP15.89■□□□□ 0.13
DDX54-206ENST00000549271 PTPN12Q05209 780 aaKnown RBP15.89■□□□□ 0.13
DDX54-206ENST00000549271 AIMP1Q12904 312 aaKnown RBP15.89■□□□□ 0.13
DDX54-206ENST00000549271 ZNF428Q96B54 188 aa15.89■□□□□ 0.13
DDX54-206ENST00000549271 PTPN22Q9Y2R2 807 aa15.89■□□□□ 0.13
DDX54-206ENST00000549271 A0A0C4DFX4 3053 aa15.89■□□□□ 0.13
DDX54-206ENST00000549271 UFL1O94874 794 aa15.88■□□□□ 0.13
DDX54-206ENST00000549271 NBPF9Q3BBW0 867 aa15.88■□□□□ 0.13
DDX54-206ENST00000549271 SPRYD7Q5W111 196 aa15.88■□□□□ 0.13
DDX54-206ENST00000549271 FAM89AQ96GI7 184 aa15.88■□□□□ 0.13
DDX54-206ENST00000549271 RANBP2P49792 3224 aaKnown RBP15.88■□□□□ 0.13
DDX54-206ENST00000549271 G3V3G9 751 aa15.87■□□□□ 0.13
DDX54-206ENST00000549271 NF2P35240 595 aa15.87■□□□□ 0.13
DDX54-206ENST00000549271 LDLRAD1Q5T700 205 aa15.87■□□□□ 0.13
DDX54-206ENST00000549271 DCAF8Q5TAQ9 597 aa15.87■□□□□ 0.13
DDX54-206ENST00000549271 ISCA1Q9BUE6 129 aa15.87■□□□□ 0.13
DDX54-206ENST00000549271 CHL1O00533 1208 aa15.86■□□□□ 0.13
DDX54-206ENST00000549271 INHBEP58166 350 aa15.86■□□□□ 0.13
DDX54-206ENST00000549271 IFNL1Q8IU54 200 aa15.86■□□□□ 0.13
DDX54-206ENST00000549271 OTUD5Q96G74 571 aa15.86■□□□□ 0.13
DDX54-206ENST00000549271 GGA1Q9UJY5 639 aa15.86■□□□□ 0.13
DDX54-206ENST00000549271 COL6A3P12111 3177 aa15.86■□□□□ 0.13
DDX54-206ENST00000549271 USP17L3A6NCW0 530 aa15.85■□□□□ 0.13
DDX54-206ENST00000549271 USP17L4A6NCW7 530 aa15.85■□□□□ 0.13
DDX54-206ENST00000549271 MANSC4A6NHS7 340 aaPredicted RBP15.85■□□□□ 0.13
DDX54-206ENST00000549271 USP17L1Q7RTZ2 530 aa15.85■□□□□ 0.13
DDX54-206ENST00000549271 ARMC9Q7Z3E5 817 aa15.85■□□□□ 0.13
DDX54-206ENST00000549271 ANKIB1Q9P2G1 1089 aa15.85■□□□□ 0.13
DDX54-206ENST00000549271 IGF2BP3O00425 579 aaKnown RBP eCLIP15.84■□□□□ 0.13
DDX54-206ENST00000549271 DLL1O00548 723 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms